EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000009047 (Gene tree)
Gene ID: 100188903
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 87040 bases
Position: chr8:84137838-84224877
Accession: 100188903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000033279	ResIII	PF04851.15	1.1e-10	1	1
ENSSSCP00000009652	ResIII	PF04851.15	1.2e-10	1	1
ENSSSCP00000033279	DEAD	PF00270.29	6e-06	1	1
ENSSSCP00000009652	DEAD	PF00270.29	6.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000009907	SMARCA5-201	4853	XM_003129174	ENSSSCP00000009652	1052 (aa)	XP_003129222	F1RRG9
ENSSSCT00000064754	SMARCA5-202	6706	-	ENSSSCP00000033279	1003 (aa)	-	A0A286ZP73

Gene Model

Click here to download ENSSSCG00000009047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000009047	SMARCA5	54	30.084	ENSSSCG00000006101	-	73	30.084
ENSSSCG00000009047	SMARCA5	92	87.093	ENSSSCG00000012649	SMARCA1	94	85.524
ENSSSCG00000009047	SMARCA5	56	43.304	ENSSSCG00000006701	CHD1L	73	43.304
ENSSSCG00000009047	SMARCA5	50	48.207	ENSSSCG00000010486	HELLS	62	48.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009047	SMARCA5	100	98.099	ENSG00000153147	SMARCA5	100	98.099	Homo_sapiens
ENSSSCG00000009047	SMARCA5	100	98.859	ENSAMEG00000009585	SMARCA5	100	98.859	Ailuropoda_melanoleuca
ENSSSCG00000009047	SMARCA5	92	96.905	ENSAPLG00000009206	SMARCA5	100	96.920	Anas_platyrhynchos
ENSSSCG00000009047	SMARCA5	97	94.721	ENSACAG00000003038	SMARCA5	99	94.721	Anolis_carolinensis
ENSSSCG00000009047	SMARCA5	100	98.004	ENSANAG00000019345	SMARCA5	99	99.297	Aotus_nancymaae
ENSSSCG00000009047	SMARCA5	100	98.764	ENSBTAG00000003399	SMARCA5	100	98.764	Bos_taurus
ENSSSCG00000009047	SMARCA5	100	98.194	ENSCJAG00000002735	SMARCA5	100	98.194	Callithrix_jacchus
ENSSSCG00000009047	SMARCA5	100	98.669	ENSCAFG00000007525	SMARCA5	100	98.669	Canis_familiaris
ENSSSCG00000009047	SMARCA5	99	98.693	ENSCAFG00020025641	SMARCA5	99	98.643	Canis_lupus_dingo
ENSSSCG00000009047	SMARCA5	100	98.954	ENSCHIG00000013730	-	100	98.954	Capra_hircus
ENSSSCG00000009047	SMARCA5	100	97.243	ENSCHIG00000016375	-	100	97.243	Capra_hircus
ENSSSCG00000009047	SMARCA5	96	98.808	ENSTSYG00000009954	SMARCA5	99	99.799	Carlito_syrichta
ENSSSCG00000009047	SMARCA5	92	99.174	ENSCAPG00000013747	SMARCA5	95	99.174	Cavia_aperea
ENSSSCG00000009047	SMARCA5	100	97.529	ENSCPOG00000002259	SMARCA5	100	97.529	Cavia_porcellus
ENSSSCG00000009047	SMARCA5	100	98.194	ENSCCAG00000027215	SMARCA5	99	99.398	Cebus_capucinus
ENSSSCG00000009047	SMARCA5	100	98.194	ENSCATG00000044917	SMARCA5	100	98.194	Cercocebus_atys
ENSSSCG00000009047	SMARCA5	96	97.830	ENSCLAG00000006153	SMARCA5	100	99.496	Chinchilla_lanigera
ENSSSCG00000009047	SMARCA5	92	99.587	ENSCSAG00000003448	SMARCA5	100	99.587	Chlorocebus_sabaeus
ENSSSCG00000009047	SMARCA5	90	98.519	ENSCHOG00000011724	SMARCA5	90	98.519	Choloepus_hoffmanni
ENSSSCG00000009047	SMARCA5	95	98.295	ENSCPBG00000027535	SMARCA5	98	95.459	Chrysemys_picta_bellii
ENSSSCG00000009047	SMARCA5	100	98.004	ENSCANG00000041629	SMARCA5	100	98.004	Colobus_angolensis_palliatus
ENSSSCG00000009047	SMARCA5	99	97.624	ENSCGRG00001012719	Smarca5	99	97.624	Cricetulus_griseus_chok1gshd
ENSSSCG00000009047	SMARCA5	95	99.398	ENSCGRG00000001417	Smarca5	99	99.597	Cricetulus_griseus_crigri
ENSSSCG00000009047	SMARCA5	98	95.164	ENSDNOG00000009158	SMARCA5	98	95.252	Dasypus_novemcinctus
ENSSSCG00000009047	SMARCA5	91	90.779	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSSSCG00000009047	SMARCA5	92	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSSSCG00000009047	SMARCA5	100	98.859	ENSEASG00005001866	SMARCA5	100	98.859	Equus_asinus_asinus
ENSSSCG00000009047	SMARCA5	100	98.859	ENSECAG00000002676	SMARCA5	100	98.859	Equus_caballus
ENSSSCG00000009047	SMARCA5	94	95.267	ENSEEUG00000013176	SMARCA5	100	95.267	Erinaceus_europaeus
ENSSSCG00000009047	SMARCA5	92	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSSSCG00000009047	SMARCA5	100	98.859	ENSFCAG00000004544	SMARCA5	100	98.859	Felis_catus
ENSSSCG00000009047	SMARCA5	92	97.526	ENSFALG00000004987	SMARCA5	100	97.526	Ficedula_albicollis
ENSSSCG00000009047	SMARCA5	95	99.100	ENSFDAG00000021016	SMARCA5	100	99.698	Fukomys_damarensis
ENSSSCG00000009047	SMARCA5	96	87.401	ENSGMOG00000007519	SMARCA5	94	89.355	Gadus_morhua
ENSSSCG00000009047	SMARCA5	95	97.791	ENSGALG00000009913	SMARCA5	98	94.971	Gallus_gallus
ENSSSCG00000009047	SMARCA5	93	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSSSCG00000009047	SMARCA5	97	96.955	ENSGAGG00000019882	SMARCA5	98	95.556	Gopherus_agassizii
ENSSSCG00000009047	SMARCA5	100	98.099	ENSGGOG00000012595	SMARCA5	99	99.496	Gorilla_gorilla
ENSSSCG00000009047	SMARCA5	96	89.751	ENSHGLG00000000317	-	95	89.690	Heterocephalus_glaber_female
ENSSSCG00000009047	SMARCA5	100	97.719	ENSHGLG00000000816	-	99	97.719	Heterocephalus_glaber_female
ENSSSCG00000009047	SMARCA5	96	98.216	ENSHGLG00100018421	-	100	99.597	Heterocephalus_glaber_male
ENSSSCG00000009047	SMARCA5	100	98.481	ENSSTOG00000010683	SMARCA5	99	98.481	Ictidomys_tridecemlineatus
ENSSSCG00000009047	SMARCA5	100	97.624	ENSJJAG00000014965	Smarca5	100	97.624	Jaculus_jaculus
ENSSSCG00000009047	SMARCA5	94	95.661	ENSLACG00000007091	SMARCA5	97	95.661	Latimeria_chalumnae
ENSSSCG00000009047	SMARCA5	94	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSSSCG00000009047	SMARCA5	100	98.384	ENSLAFG00000007795	SMARCA5	100	98.384	Loxodonta_africana
ENSSSCG00000009047	SMARCA5	100	98.194	ENSMFAG00000043649	SMARCA5	100	98.194	Macaca_fascicularis
ENSSSCG00000009047	SMARCA5	100	98.194	ENSMMUG00000000829	SMARCA5	100	98.194	Macaca_mulatta
ENSSSCG00000009047	SMARCA5	100	98.194	ENSMNEG00000031916	SMARCA5	100	98.194	Macaca_nemestrina
ENSSSCG00000009047	SMARCA5	100	98.194	ENSMLEG00000042393	SMARCA5	100	98.194	Mandrillus_leucophaeus
ENSSSCG00000009047	SMARCA5	95	97.300	ENSMGAG00000003517	SMARCA5	99	97.300	Meleagris_gallopavo
ENSSSCG00000009047	SMARCA5	94	99.698	ENSMAUG00000015902	Smarca5	98	99.698	Mesocricetus_auratus
ENSSSCG00000009047	SMARCA5	100	98.574	ENSMICG00000003971	SMARCA5	100	98.574	Microcebus_murinus
ENSSSCG00000009047	SMARCA5	99	97.688	ENSMOCG00000016986	-	99	97.624	Microtus_ochrogaster
ENSSSCG00000009047	SMARCA5	100	96.114	ENSMODG00000000391	SMARCA5	98	96.996	Monodelphis_domestica
ENSSSCG00000009047	SMARCA5	100	97.814	ENSMUSG00000031715	Smarca5	100	97.814	Mus_musculus
ENSSSCG00000009047	SMARCA5	100	98.004	MGP_PahariEiJ_G0022862	Smarca5	100	98.004	Mus_pahari
ENSSSCG00000009047	SMARCA5	100	99.049	ENSMLUG00000000468	SMARCA5	100	99.049	Myotis_lucifugus
ENSSSCG00000009047	SMARCA5	100	98.004	ENSNGAG00000000441	Smarca5	100	98.004	Nannospalax_galili
ENSSSCG00000009047	SMARCA5	100	98.194	ENSNLEG00000005383	SMARCA5	100	98.194	Nomascus_leucogenys
ENSSSCG00000009047	SMARCA5	91	94.841	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSSSCG00000009047	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSSSCG00000009047	SMARCA5	92	99.174	ENSOANG00000013921	SMARCA5	100	99.174	Ornithorhynchus_anatinus
ENSSSCG00000009047	SMARCA5	92	99.794	ENSOCUG00000013042	SMARCA5	100	99.794	Oryctolagus_cuniculus
ENSSSCG00000009047	SMARCA5	100	98.384	ENSOGAG00000009702	SMARCA5	100	98.384	Otolemur_garnettii
ENSSSCG00000009047	SMARCA5	99	98.794	ENSOARG00000010589	SMARCA5	99	98.668	Ovis_aries
ENSSSCG00000009047	SMARCA5	100	97.909	ENSPPAG00000028523	SMARCA5	99	99.396	Pan_paniscus
ENSSSCG00000009047	SMARCA5	98	93.372	ENSPPRG00000004925	SMARCA5	98	94.089	Panthera_pardus
ENSSSCG00000009047	SMARCA5	96	99.703	ENSPTIG00000020959	SMARCA5	97	99.703	Panthera_tigris_altaica
ENSSSCG00000009047	SMARCA5	100	98.004	ENSPTRG00000016472	SMARCA5	99	99.496	Pan_troglodytes
ENSSSCG00000009047	SMARCA5	100	98.194	ENSPANG00000001175	SMARCA5	100	98.194	Papio_anubis
ENSSSCG00000009047	SMARCA5	95	89.500	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSSSCG00000009047	SMARCA5	93	90.881	ENSPKIG00000015699	SMARCA5	98	89.835	Paramormyrops_kingsleyae
ENSSSCG00000009047	SMARCA5	95	96.289	ENSPSIG00000004177	SMARCA5	100	96.289	Pelodiscus_sinensis
ENSSSCG00000009047	SMARCA5	92	90.021	ENSPMGG00000012316	SMARCA5	100	90.021	Periophthalmus_magnuspinnatus
ENSSSCG00000009047	SMARCA5	97	97.741	ENSPEMG00000008060	Smarca5	99	97.741	Peromyscus_maniculatus_bairdii
ENSSSCG00000009047	SMARCA5	64	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSSSCG00000009047	SMARCA5	96	69.676	ENSPMAG00000006011	SMARCA5	81	85.600	Petromyzon_marinus
ENSSSCG00000009047	SMARCA5	99	96.535	ENSPCIG00000003926	SMARCA5	98	96.609	Phascolarctos_cinereus
ENSSSCG00000009047	SMARCA5	100	98.289	ENSPPYG00000015091	SMARCA5	100	98.289	Pongo_abelii
ENSSSCG00000009047	SMARCA5	90	90.240	ENSPCAG00000014230	SMARCA5	90	90.211	Procavia_capensis
ENSSSCG00000009047	SMARCA5	100	95.817	ENSPCOG00000026744	SMARCA5	100	95.817	Propithecus_coquereli
ENSSSCG00000009047	SMARCA5	99	98.858	ENSPVAG00000006482	SMARCA5	100	98.858	Pteropus_vampyrus
ENSSSCG00000009047	SMARCA5	96	88.605	ENSPNAG00000027824	SMARCA5	97	90.456	Pygocentrus_nattereri
ENSSSCG00000009047	SMARCA5	95	99.497	ENSRNOG00000018149	Smarca5	100	99.497	Rattus_norvegicus
ENSSSCG00000009047	SMARCA5	100	98.006	ENSRBIG00000044644	SMARCA5	100	98.006	Rhinopithecus_bieti
ENSSSCG00000009047	SMARCA5	99	97.892	ENSRROG00000029591	SMARCA5	99	99.497	Rhinopithecus_roxellana
ENSSSCG00000009047	SMARCA5	100	98.194	ENSSBOG00000036257	SMARCA5	100	98.194	Saimiri_boliviensis_boliviensis
ENSSSCG00000009047	SMARCA5	94	99.194	ENSSHAG00000008464	SMARCA5	100	99.194	Sarcophilus_harrisii
ENSSSCG00000009047	SMARCA5	94	90.352	ENSSFOG00015013252	SMARCA5	97	90.352	Scleropages_formosus
ENSSSCG00000009047	SMARCA5	97	95.088	ENSSPUG00000007604	SMARCA5	99	96.583	Sphenodon_punctatus
ENSSSCG00000009047	SMARCA5	96	96.329	ENSTGUG00000002408	SMARCA5	100	96.329	Taeniopygia_guttata
ENSSSCG00000009047	SMARCA5	99	98.693	ENSUAMG00000023495	SMARCA5	99	98.643	Ursus_americanus
ENSSSCG00000009047	SMARCA5	95	99.701	ENSUMAG00000015324	SMARCA5	97	99.701	Ursus_maritimus
ENSSSCG00000009047	SMARCA5	100	98.954	ENSVPAG00000008982	SMARCA5	100	98.954	Vicugna_pacos
ENSSSCG00000009047	SMARCA5	100	98.669	ENSVVUG00000017473	SMARCA5	100	98.669	Vulpes_vulpes
ENSSSCG00000009047	SMARCA5	95	92.259	ENSXETG00000017566	smarca5	95	93.326	Xenopus_tropicalis