EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000009101 (Gene tree)
Gene ID
100522885
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
192601 bases
Position
chr8:103189313-103381913
Accession
100522885
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000009710zf-C2H2PF00096.269.7e-63110
ENSSSCP00000009710zf-C2H2PF00096.269.7e-63210
ENSSSCP00000009710zf-C2H2PF00096.269.7e-63310
ENSSSCP00000009710zf-C2H2PF00096.269.7e-63410
ENSSSCP00000009710zf-C2H2PF00096.269.7e-63510
ENSSSCP00000009710zf-C2H2PF00096.269.7e-63610
ENSSSCP00000009710zf-C2H2PF00096.269.7e-63710
ENSSSCP00000009710zf-C2H2PF00096.269.7e-63810
ENSSSCP00000009710zf-C2H2PF00096.269.7e-63910
ENSSSCP00000009710zf-C2H2PF00096.269.7e-631010
ENSSSCP00000047373zf-C2H2PF00096.266.7e-60110
ENSSSCP00000047373zf-C2H2PF00096.266.7e-60210
ENSSSCP00000047373zf-C2H2PF00096.266.7e-60310
ENSSSCP00000047373zf-C2H2PF00096.266.7e-60410
ENSSSCP00000047373zf-C2H2PF00096.266.7e-60510
ENSSSCP00000047373zf-C2H2PF00096.266.7e-60610
ENSSSCP00000047373zf-C2H2PF00096.266.7e-60710
ENSSSCP00000047373zf-C2H2PF00096.266.7e-60810
ENSSSCP00000047373zf-C2H2PF00096.266.7e-60910
ENSSSCP00000047373zf-C2H2PF00096.266.7e-601010
ENSSSCP00000042369zf-C2H2PF00096.269.9e-60110
ENSSSCP00000042369zf-C2H2PF00096.269.9e-60210
ENSSSCP00000042369zf-C2H2PF00096.269.9e-60310
ENSSSCP00000042369zf-C2H2PF00096.269.9e-60410
ENSSSCP00000042369zf-C2H2PF00096.269.9e-60510
ENSSSCP00000042369zf-C2H2PF00096.269.9e-60610
ENSSSCP00000042369zf-C2H2PF00096.269.9e-60710
ENSSSCP00000042369zf-C2H2PF00096.269.9e-60810
ENSSSCP00000042369zf-C2H2PF00096.269.9e-60910
ENSSSCP00000042369zf-C2H2PF00096.269.9e-601010
ENSSSCP00000055927zf-C2H2PF00096.262.3e-59110
ENSSSCP00000055927zf-C2H2PF00096.262.3e-59210
ENSSSCP00000055927zf-C2H2PF00096.262.3e-59310
ENSSSCP00000055927zf-C2H2PF00096.262.3e-59410
ENSSSCP00000055927zf-C2H2PF00096.262.3e-59510
ENSSSCP00000055927zf-C2H2PF00096.262.3e-59610
ENSSSCP00000055927zf-C2H2PF00096.262.3e-59710
ENSSSCP00000055927zf-C2H2PF00096.262.3e-59810
ENSSSCP00000055927zf-C2H2PF00096.262.3e-59910
ENSSSCP00000055927zf-C2H2PF00096.262.3e-591010
ENSSSCP00000043570zf-C2H2PF00096.261.9e-58110
ENSSSCP00000043570zf-C2H2PF00096.261.9e-58210
ENSSSCP00000043570zf-C2H2PF00096.261.9e-58310
ENSSSCP00000043570zf-C2H2PF00096.261.9e-58410
ENSSSCP00000043570zf-C2H2PF00096.261.9e-58510
ENSSSCP00000043570zf-C2H2PF00096.261.9e-58610
ENSSSCP00000043570zf-C2H2PF00096.261.9e-58710
ENSSSCP00000043570zf-C2H2PF00096.261.9e-58810
ENSSSCP00000043570zf-C2H2PF00096.261.9e-58910
ENSSSCP00000043570zf-C2H2PF00096.261.9e-581010
ENSSSCP00000009710zf-metPF12874.75.5e-2414
ENSSSCP00000009710zf-metPF12874.75.5e-2424
ENSSSCP00000009710zf-metPF12874.75.5e-2434
ENSSSCP00000009710zf-metPF12874.75.5e-2444
ENSSSCP00000047373zf-metPF12874.72.7e-2113
ENSSSCP00000047373zf-metPF12874.72.7e-2123
ENSSSCP00000047373zf-metPF12874.72.7e-2133
ENSSSCP00000043570zf-metPF12874.73e-2113
ENSSSCP00000043570zf-metPF12874.73e-2123
ENSSSCP00000043570zf-metPF12874.73e-2133
ENSSSCP00000042369zf-metPF12874.73.9e-2113
ENSSSCP00000042369zf-metPF12874.73.9e-2123
ENSSSCP00000042369zf-metPF12874.73.9e-2133
ENSSSCP00000055927zf-metPF12874.78.7e-2113
ENSSSCP00000055927zf-metPF12874.78.7e-2123
ENSSSCP00000055927zf-metPF12874.78.7e-2133
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000054914PRDM5-2054822XM_021101642ENSSSCP00000055927599 (aa)XP_020957301A0A287BHT8
ENSSSCT00000043561PRDM5-2022308-ENSSSCP00000043570606 (aa)-A0A287AI64
ENSSSCT00000053281PRDM5-2042164-ENSSSCP00000047373558 (aa)-A0A287ATG2
ENSSSCT00000053619PRDM5-2032203-ENSSSCP00000042369571 (aa)-A0A287AEH3
ENSSSCT00000009967PRDM5-2012380XM_021101640ENSSSCP00000009710630 (aa)XP_020957299F1S1T2
Gene Model
Click here to download ENSSSCG00000009101's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009101's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000009101PRDM57836.422ENSSSCG00000029347-9935.532
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000009101PRDM510097.663ENSG00000138738PRDM510097.663Homo_sapiens
ENSSSCG00000009101PRDM510080.532ENSAPOG00000023220prdm510080.532Acanthochromis_polyacanthus
ENSSSCG00000009101PRDM59588.947ENSAMEG00000003050PRDM510092.882Ailuropoda_melanoleuca
ENSSSCG00000009101PRDM510079.000ENSACIG00000000406prdm510079.000Amphilophus_citrinellus
ENSSSCG00000009101PRDM510081.333ENSAOCG00000014806prdm510081.333Amphiprion_ocellaris
ENSSSCG00000009101PRDM510072.142ENSAPEG00000016846prdm510073.269Amphiprion_percula
ENSSSCG00000009101PRDM510081.167ENSATEG00000013829prdm510081.167Anabas_testudineus
ENSSSCG00000009101PRDM59584.884ENSAPLG00000013828PRDM510084.884Anas_platyrhynchos
ENSSSCG00000009101PRDM510079.206ENSACAG00000012999PRDM510079.206Anolis_carolinensis
ENSSSCG00000009101PRDM510099.329ENSANAG00000027411PRDM510099.329Aotus_nancymaae
ENSSSCG00000009101PRDM510081.167ENSACLG00000017996prdm510081.833Astatotilapia_calliptera
ENSSSCG00000009101PRDM59174.033ENSAMXG00000041864prdm59978.585Astyanax_mexicanus
ENSSSCG00000009101PRDM510097.619ENSBTAG00000012111PRDM510097.619Bos_taurus
ENSSSCG00000009101PRDM510098.734ENSCJAG00000003133PRDM510098.734Callithrix_jacchus
ENSSSCG00000009101PRDM59587.324ENSCAFG00000004179PRDM510086.207Canis_familiaris
ENSSSCG00000009101PRDM510098.331ENSCAFG00020017685PRDM510098.331Canis_lupus_dingo
ENSSSCG00000009101PRDM510097.162ENSCHIG00000018772PRDM510097.162Capra_hircus
ENSSSCG00000009101PRDM59596.109ENSTSYG00000009630PRDM59595.963Carlito_syrichta
ENSSSCG00000009101PRDM59598.000ENSCAPG00000015217PRDM510098.658Cavia_aperea
ENSSSCG00000009101PRDM59598.418ENSCPOG00000012883PRDM510098.658Cavia_porcellus
ENSSSCG00000009101PRDM510099.329ENSCCAG00000023157PRDM510099.329Cebus_capucinus
ENSSSCG00000009101PRDM510099.367ENSCATG00000042510PRDM510099.367Cercocebus_atys
ENSSSCG00000009101PRDM59598.418ENSCLAG00000005392PRDM510098.658Chinchilla_lanigera
ENSSSCG00000009101PRDM510097.496ENSCSAG00000003729PRDM510097.496Chlorocebus_sabaeus
ENSSSCG00000009101PRDM59993.200ENSCHOG00000007801PRDM59193.200Choloepus_hoffmanni
ENSSSCG00000009101PRDM510083.881ENSCPBG00000024735PRDM510083.725Chrysemys_picta_bellii
ENSSSCG00000009101PRDM510099.367ENSCANG00000036807PRDM510099.367Colobus_angolensis_palliatus
ENSSSCG00000009101PRDM510097.152ENSCGRG00001010581Prdm510097.152Cricetulus_griseus_chok1gshd
ENSSSCG00000009101PRDM59585.114ENSCGRG00000010996-9985.114Cricetulus_griseus_crigri
ENSSSCG00000009101PRDM510080.667ENSCSEG00000019979prdm510080.667Cynoglossus_semilaevis
ENSSSCG00000009101PRDM510074.960ENSCVAG00000013692prdm510074.960Cyprinodon_variegatus
ENSSSCG00000009101PRDM510077.848ENSDARG00000006288prdm59977.971Danio_rerio
ENSSSCG00000009101PRDM59196.696ENSDNOG00000002009PRDM510096.696Dasypus_novemcinctus
ENSSSCG00000009101PRDM510097.785ENSDORG00000007739Prdm510097.785Dipodomys_ordii
ENSSSCG00000009101PRDM58585.827ENSETEG00000020268PRDM59085.827Echinops_telfairi
ENSSSCG00000009101PRDM59971.739ENSEBUG00000004301prdm510072.213Eptatretus_burgeri
ENSSSCG00000009101PRDM510099.684ENSEASG00005018365PRDM5100100.000Equus_asinus_asinus
ENSSSCG00000009101PRDM510071.429ENSECAG00000024747-10085.276Equus_caballus
ENSSSCG00000009101PRDM59997.856ENSECAG00000011516PRDM59097.059Equus_caballus
ENSSSCG00000009101PRDM59987.326ENSEEUG00000010306PRDM510087.326Erinaceus_europaeus
ENSSSCG00000009101PRDM59976.796ENSELUG00000005894prdm59377.348Esox_lucius
ENSSSCG00000009101PRDM510098.331ENSFCAG00000025656PRDM510098.331Felis_catus
ENSSSCG00000009101PRDM59979.751ENSFALG00000008381PRDM510079.751Ficedula_albicollis
ENSSSCG00000009101PRDM510098.734ENSFDAG00000021361PRDM510098.734Fukomys_damarensis
ENSSSCG00000009101PRDM59981.302ENSFHEG00000013040prdm59981.302Fundulus_heteroclitus
ENSSSCG00000009101PRDM510069.737ENSGMOG00000012038prdm510070.199Gadus_morhua
ENSSSCG00000009101PRDM510084.992ENSGALG00000011963PRDM510084.992Gallus_gallus
ENSSSCG00000009101PRDM59978.413ENSGAFG00000019233prdm510077.500Gambusia_affinis
ENSSSCG00000009101PRDM59981.992ENSGAGG00000020362PRDM59982.567Gopherus_agassizii
ENSSSCG00000009101PRDM510099.367ENSGGOG00000013562PRDM510099.367Gorilla_gorilla
ENSSSCG00000009101PRDM510080.833ENSHBUG00000023375prdm510081.667Haplochromis_burtoni
ENSSSCG00000009101PRDM510087.145ENSHGLG00000003010PRDM510091.319Heterocephalus_glaber_female
ENSSSCG00000009101PRDM510098.658ENSHGLG00100003696PRDM510098.658Heterocephalus_glaber_male
ENSSSCG00000009101PRDM59978.605ENSHCOG00000012131prdm59978.922Hippocampus_comes
ENSSSCG00000009101PRDM510080.833ENSIPUG00000001248prdm510081.000Ictalurus_punctatus
ENSSSCG00000009101PRDM59594.304ENSSTOG00000004741PRDM510094.631Ictidomys_tridecemlineatus
ENSSSCG00000009101PRDM59597.785ENSJJAG00000011464Prdm510097.987Jaculus_jaculus
ENSSSCG00000009101PRDM510080.833ENSKMAG00000013663prdm510081.000Kryptolebias_marmoratus
ENSSSCG00000009101PRDM510078.922ENSLBEG00000022736prdm510079.239Labrus_bergylta
ENSSSCG00000009101PRDM59580.245ENSLACG00000009187PRDM59983.016Latimeria_chalumnae
ENSSSCG00000009101PRDM510080.349ENSLOCG00000009778prdm59980.476Lepisosteus_oculatus
ENSSSCG00000009101PRDM510097.997ENSLAFG00000006532PRDM510097.997Loxodonta_africana
ENSSSCG00000009101PRDM510099.367ENSMFAG00000045845PRDM510099.367Macaca_fascicularis
ENSSSCG00000009101PRDM510099.367ENSMMUG00000003249PRDM510099.367Macaca_mulatta
ENSSSCG00000009101PRDM510099.367ENSMNEG00000019018PRDM510099.367Macaca_nemestrina
ENSSSCG00000009101PRDM59597.359ENSMLEG00000023145PRDM510097.359Mandrillus_leucophaeus
ENSSSCG00000009101PRDM510078.956ENSMAMG00000013419prdm510078.956Mastacembelus_armatus
ENSSSCG00000009101PRDM510080.833ENSMZEG00005020645prdm510081.667Maylandia_zebra
ENSSSCG00000009101PRDM59584.551ENSMGAG00000010710PRDM510084.551Meleagris_gallopavo
ENSSSCG00000009101PRDM510097.152ENSMAUG00000006768Prdm510097.152Mesocricetus_auratus
ENSSSCG00000009101PRDM510098.658ENSMICG00000001459PRDM510098.658Microcebus_murinus
ENSSSCG00000009101PRDM510097.152ENSMOCG00000016267Prdm510097.152Microtus_ochrogaster
ENSSSCG00000009101PRDM510081.333ENSMMOG00000006035prdm510081.333Mola_mola
ENSSSCG00000009101PRDM510081.043ENSMODG00000018942PRDM510081.043Monodelphis_domestica
ENSSSCG00000009101PRDM510077.833ENSMALG00000013934prdm510077.833Monopterus_albus
ENSSSCG00000009101PRDM510097.468MGP_CAROLIEiJ_G0028463Prdm510097.468Mus_caroli
ENSSSCG00000009101PRDM510097.152ENSMUSG00000029913Prdm510097.152Mus_musculus
ENSSSCG00000009101PRDM510097.468MGP_PahariEiJ_G0022203Prdm510097.468Mus_pahari
ENSSSCG00000009101PRDM510097.152MGP_SPRETEiJ_G0029467Prdm510097.152Mus_spretus
ENSSSCG00000009101PRDM510097.460ENSMPUG00000017415PRDM510097.460Mustela_putorius_furo
ENSSSCG00000009101PRDM59582.872ENSMLUG00000006097PRDM510086.678Myotis_lucifugus
ENSSSCG00000009101PRDM510097.785ENSNGAG00000018317Prdm510097.785Nannospalax_galili
ENSSSCG00000009101PRDM510072.250ENSNBRG00000004976prdm510077.907Neolamprologus_brichardi
ENSSSCG00000009101PRDM510099.367ENSNLEG00000009107PRDM510099.367Nomascus_leucogenys
ENSSSCG00000009101PRDM58989.831ENSMEUG00000006576-7189.831Notamacropus_eugenii
ENSSSCG00000009101PRDM59596.198ENSOPRG00000011066-8975.884Ochotona_princeps
ENSSSCG00000009101PRDM59998.734ENSODEG00000009133PRDM510098.734Octodon_degus
ENSSSCG00000009101PRDM510079.239ENSONIG00000003111prdm59979.715Oreochromis_niloticus
ENSSSCG00000009101PRDM57687.778ENSOANG00000006197-10087.778Ornithorhynchus_anatinus
ENSSSCG00000009101PRDM59981.930ENSOANG00000015109PRDM59781.930Ornithorhynchus_anatinus
ENSSSCG00000009101PRDM59388.586ENSOCUG00000013454PRDM510090.119Oryctolagus_cuniculus
ENSSSCG00000009101PRDM510081.000ENSORLG00000016247prdm510081.667Oryzias_latipes
ENSSSCG00000009101PRDM510081.167ENSORLG00020018051prdm510081.500Oryzias_latipes_hni
ENSSSCG00000009101PRDM510081.000ENSORLG00015013760prdm510081.667Oryzias_latipes_hsok
ENSSSCG00000009101PRDM510081.198ENSOMEG00000005143prdm510081.364Oryzias_melastigma
ENSSSCG00000009101PRDM58488.889ENSOGAG00000009996PRDM59888.411Otolemur_garnettii
ENSSSCG00000009101PRDM59594.353ENSOARG00000015473PRDM510096.280Ovis_aries
ENSSSCG00000009101PRDM59597.471ENSPPAG00000043045PRDM510097.471Pan_paniscus
ENSSSCG00000009101PRDM510098.331ENSPPRG00000001020PRDM510098.331Panthera_pardus
ENSSSCG00000009101PRDM59598.063ENSPTIG00000010807PRDM59598.063Panthera_tigris_altaica
ENSSSCG00000009101PRDM510099.367ENSPTRG00000016403PRDM510099.367Pan_troglodytes
ENSSSCG00000009101PRDM510099.367ENSPANG00000023612PRDM510099.367Papio_anubis
ENSSSCG00000009101PRDM510054.446ENSPKIG00000015492prdm510058.226Paramormyrops_kingsleyae
ENSSSCG00000009101PRDM510084.044ENSPSIG00000013505PRDM510084.202Pelodiscus_sinensis
ENSSSCG00000009101PRDM510077.667ENSPMGG00000012622prdm510078.167Periophthalmus_magnuspinnatus
ENSSSCG00000009101PRDM57768.932ENSPMAG00000005248prdm510072.330Petromyzon_marinus
ENSSSCG00000009101PRDM59976.738ENSPFOG00000018630prdm59977.005Poecilia_formosa
ENSSSCG00000009101PRDM510079.239ENSPLAG00000014148prdm510079.239Poecilia_latipinna
ENSSSCG00000009101PRDM510081.500ENSPMEG00000018002prdm510081.500Poecilia_mexicana
ENSSSCG00000009101PRDM510081.500ENSPREG00000018366prdm510081.500Poecilia_reticulata
ENSSSCG00000009101PRDM510097.143ENSPPYG00000015031PRDM510097.143Pongo_abelii
ENSSSCG00000009101PRDM59590.651ENSPCAG00000011671PRDM510090.651Procavia_capensis
ENSSSCG00000009101PRDM510098.658ENSPCOG00000022828PRDM510098.658Propithecus_coquereli
ENSSSCG00000009101PRDM59588.982ENSPVAG00000012309PRDM510088.982Pteropus_vampyrus
ENSSSCG00000009101PRDM510081.167ENSPNYG00000012194prdm510081.833Pundamilia_nyererei
ENSSSCG00000009101PRDM510081.000ENSPNAG00000026181prdm510081.833Pygocentrus_nattereri
ENSSSCG00000009101PRDM59375.340ENSPNAG00000023191-9975.340Pygocentrus_nattereri
ENSSSCG00000009101PRDM59989.946ENSRNOG00000023679Prdm59989.946Rattus_norvegicus
ENSSSCG00000009101PRDM510099.367ENSRBIG00000041307PRDM510099.367Rhinopithecus_bieti
ENSSSCG00000009101PRDM59591.603ENSRROG00000035343PRDM59691.603Rhinopithecus_roxellana
ENSSSCG00000009101PRDM510099.329ENSSBOG00000022100PRDM510099.329Saimiri_boliviensis_boliviensis
ENSSSCG00000009101PRDM59180.533ENSSHAG00000003250PRDM510080.738Sarcophilus_harrisii
ENSSSCG00000009101PRDM510075.610ENSSFOG00015020478prdm510075.610Scleropages_formosus
ENSSSCG00000009101PRDM510081.667ENSSMAG00000018844prdm510081.833Scophthalmus_maximus
ENSSSCG00000009101PRDM510081.167ENSSDUG00000020397prdm510081.833Seriola_dumerili
ENSSSCG00000009101PRDM510081.167ENSSLDG00000013353prdm510081.833Seriola_lalandi_dorsalis
ENSSSCG00000009101PRDM59598.291ENSSARG00000014129-8098.291Sorex_araneus
ENSSSCG00000009101PRDM510089.873ENSSPUG00000009941PRDM510089.933Sphenodon_punctatus
ENSSSCG00000009101PRDM510079.239ENSSPAG00000013866prdm510079.873Stegastes_partitus
ENSSSCG00000009101PRDM59584.140ENSTGUG00000001920PRDM510084.140Taeniopygia_guttata
ENSSSCG00000009101PRDM510080.667ENSTRUG00000013850prdm510080.667Takifugu_rubripes
ENSSSCG00000009101PRDM510066.057ENSTNIG00000005901prdm510066.057Tetraodon_nigroviridis
ENSSSCG00000009101PRDM59591.507ENSTBEG00000015386PRDM58691.507Tupaia_belangeri
ENSSSCG00000009101PRDM510098.095ENSTTRG00000010996PRDM510098.095Tursiops_truncatus
ENSSSCG00000009101PRDM59597.436ENSUAMG00000009994PRDM58496.914Ursus_americanus
ENSSSCG00000009101PRDM59599.684ENSUMAG00000003733PRDM59999.684Ursus_maritimus
ENSSSCG00000009101PRDM59789.052ENSVPAG00000007435PRDM510089.052Vicugna_pacos
ENSSSCG00000009101PRDM59397.956ENSVVUG00000013192PRDM510097.956Vulpes_vulpes
ENSSSCG00000009101PRDM510078.922ENSXETG00000002101prdm510079.081Xenopus_tropicalis
ENSSSCG00000009101PRDM510081.167ENSXCOG00000008567prdm510081.500Xiphophorus_couchianus
ENSSSCG00000009101PRDM510081.167ENSXMAG00000013825prdm510081.500Xiphophorus_maculatus

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