EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000009193 (Gene tree)
Gene ID: 100515330
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 78992 bases
Position: chr8:125409490-125488481
Accession: 100515330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000009803	ResIII	PF04851.15	1.9e-10	1	1
ENSSSCP00000032164	ResIII	PF04851.15	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000054734	SMARCAD1-201	5468	XM_021101760	ENSSSCP00000032164	841 (aa)	XP_020957419	A0A286ZKS9
ENSSSCT00000010066	SMARCAD1-202	5019	XM_005666984	ENSSSCP00000009803	1028 (aa)	XP_005667041	F1RWW3
ENSSSCT00000045825	SMARCAD1-203	2498	-	ENSSSCP00000046959	203 (aa)	-	A0A287ASM5

Gene Model

Click here to download ENSSSCG00000009193's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000009193	SMARCAD1	60	32.197	ENSSSCG00000006101	-	62	32.197
ENSSSCG00000009193	SMARCAD1	62	37.432	ENSSSCG00000010486	HELLS	64	37.432
ENSSSCG00000009193	SMARCAD1	62	36.190	ENSSSCG00000006701	CHD1L	61	36.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009193	SMARCAD1	100	97.979	ENSG00000163104	SMARCAD1	100	98.826	Homo_sapiens
ENSSSCG00000009193	SMARCAD1	98	62.926	ENSAPOG00000011446	smarcad1a	90	62.483	Acanthochromis_polyacanthus
ENSSSCG00000009193	SMARCAD1	100	99.405	ENSAMEG00000005844	SMARCAD1	100	98.152	Ailuropoda_melanoleuca
ENSSSCG00000009193	SMARCAD1	93	58.537	ENSACIG00000018326	smarcad1a	100	68.401	Amphilophus_citrinellus
ENSSSCG00000009193	SMARCAD1	100	62.926	ENSAOCG00000019762	smarcad1a	96	62.926	Amphiprion_ocellaris
ENSSSCG00000009193	SMARCAD1	100	63.068	ENSAPEG00000003889	smarcad1a	96	62.622	Amphiprion_percula
ENSSSCG00000009193	SMARCAD1	98	62.921	ENSATEG00000015608	smarcad1a	93	62.921	Anabas_testudineus
ENSSSCG00000009193	SMARCAD1	100	75.414	ENSAPLG00000004630	SMARCAD1	100	72.867	Anas_platyrhynchos
ENSSSCG00000009193	SMARCAD1	100	75.829	ENSACAG00000013554	SMARCAD1	100	70.628	Anolis_carolinensis
ENSSSCG00000009193	SMARCAD1	100	97.860	ENSANAG00000020488	SMARCAD1	100	96.505	Aotus_nancymaae
ENSSSCG00000009193	SMARCAD1	98	62.376	ENSACLG00000017063	smarcad1a	98	61.180	Astatotilapia_calliptera
ENSSSCG00000009193	SMARCAD1	85	60.530	ENSAMXG00000015470	smarcad1a	99	60.530	Astyanax_mexicanus
ENSSSCG00000009193	SMARCAD1	96	58.959	ENSAMXG00000019130	smarcad1b	85	60.401	Astyanax_mexicanus
ENSSSCG00000009193	SMARCAD1	100	98.221	ENSBTAG00000017061	SMARCAD1	100	97.573	Bos_taurus
ENSSSCG00000009193	SMARCAD1	75	42.879	WBGene00010845	M03C11.8	70	40.647	Caenorhabditis_elegans
ENSSSCG00000009193	SMARCAD1	100	98.098	ENSCJAG00000006778	SMARCAD1	100	96.887	Callithrix_jacchus
ENSSSCG00000009193	SMARCAD1	100	99.049	ENSCAFG00000010026	SMARCAD1	100	97.665	Canis_familiaris
ENSSSCG00000009193	SMARCAD1	100	98.930	ENSCAFG00020003994	SMARCAD1	100	98.429	Canis_lupus_dingo
ENSSSCG00000009193	SMARCAD1	100	98.573	ENSCHIG00000012905	SMARCAD1	100	97.860	Capra_hircus
ENSSSCG00000009193	SMARCAD1	100	97.979	ENSTSYG00000002706	SMARCAD1	100	96.693	Carlito_syrichta
ENSSSCG00000009193	SMARCAD1	97	82.868	ENSCAPG00000016744	SMARCAD1	96	78.172	Cavia_aperea
ENSSSCG00000009193	SMARCAD1	100	95.957	ENSCPOG00000011398	SMARCAD1	100	93.037	Cavia_porcellus
ENSSSCG00000009193	SMARCAD1	100	98.098	ENSCCAG00000022264	SMARCAD1	100	98.993	Cebus_capucinus
ENSSSCG00000009193	SMARCAD1	100	97.979	ENSCATG00000035663	SMARCAD1	100	96.887	Cercocebus_atys
ENSSSCG00000009193	SMARCAD1	100	97.979	ENSCSAG00000004186	SMARCAD1	100	97.979	Chlorocebus_sabaeus
ENSSSCG00000009193	SMARCAD1	100	78.817	ENSCPBG00000013203	SMARCAD1	100	74.209	Chrysemys_picta_bellii
ENSSSCG00000009193	SMARCAD1	78	49.775	ENSCING00000001688	-	99	49.775	Ciona_intestinalis
ENSSSCG00000009193	SMARCAD1	100	97.860	ENSCANG00000003556	SMARCAD1	100	98.826	Colobus_angolensis_palliatus
ENSSSCG00000009193	SMARCAD1	100	94.174	ENSCGRG00001015056	Smarcad1	100	92.704	Cricetulus_griseus_chok1gshd
ENSSSCG00000009193	SMARCAD1	100	94.174	ENSCGRG00000014087	Smarcad1	100	92.704	Cricetulus_griseus_crigri
ENSSSCG00000009193	SMARCAD1	96	60.545	ENSCSEG00000014419	-	91	58.904	Cynoglossus_semilaevis
ENSSSCG00000009193	SMARCAD1	100	62.245	ENSCSEG00000017903	smarcad1a	100	46.831	Cynoglossus_semilaevis
ENSSSCG00000009193	SMARCAD1	100	54.607	ENSDARG00000014041	smarcad1a	92	55.727	Danio_rerio
ENSSSCG00000009193	SMARCAD1	95	58.160	ENSDARG00000073721	smarcad1b	82	59.367	Danio_rerio
ENSSSCG00000009193	SMARCAD1	100	97.622	ENSDNOG00000000806	-	100	96.206	Dasypus_novemcinctus
ENSSSCG00000009193	SMARCAD1	100	94.768	ENSDORG00000012331	Smarcad1	100	92.144	Dipodomys_ordii
ENSSSCG00000009193	SMARCAD1	76	45.538	FBgn0032157	Etl1	85	43.191	Drosophila_melanogaster
ENSSSCG00000009193	SMARCAD1	75	45.706	ENSEBUG00000003969	smarcad1a	96	46.353	Eptatretus_burgeri
ENSSSCG00000009193	SMARCAD1	100	99.524	ENSEASG00005012382	SMARCAD1	100	98.346	Equus_asinus_asinus
ENSSSCG00000009193	SMARCAD1	100	99.524	ENSECAG00000011562	SMARCAD1	100	98.346	Equus_caballus
ENSSSCG00000009193	SMARCAD1	96	56.848	ENSELUG00000019154	smarcad1b	79	59.207	Esox_lucius
ENSSSCG00000009193	SMARCAD1	100	56.854	ENSELUG00000018535	smarcad1a	100	51.437	Esox_lucius
ENSSSCG00000009193	SMARCAD1	100	99.168	ENSFCAG00000003958	SMARCAD1	100	99.497	Felis_catus
ENSSSCG00000009193	SMARCAD1	100	74.175	ENSFALG00000006089	SMARCAD1	100	67.337	Ficedula_albicollis
ENSSSCG00000009193	SMARCAD1	100	96.314	ENSFDAG00000017027	SMARCAD1	100	94.650	Fukomys_damarensis
ENSSSCG00000009193	SMARCAD1	93	65.321	ENSFHEG00000012778	smarcad1a	88	62.483	Fundulus_heteroclitus
ENSSSCG00000009193	SMARCAD1	100	58.323	ENSGMOG00000018995	smarcad1a	97	57.949	Gadus_morhua
ENSSSCG00000009193	SMARCAD1	93	73.704	ENSGALG00000037339	SMARCAD1	99	74.330	Gallus_gallus
ENSSSCG00000009193	SMARCAD1	90	66.667	ENSGAFG00000013498	smarcad1a	60	66.667	Gambusia_affinis
ENSSSCG00000009193	SMARCAD1	100	58.796	ENSGACG00000007327	smarcad1a	99	58.730	Gasterosteus_aculeatus
ENSSSCG00000009193	SMARCAD1	100	78.580	ENSGAGG00000008582	SMARCAD1	100	74.085	Gopherus_agassizii
ENSSSCG00000009193	SMARCAD1	100	98.098	ENSGGOG00000023001	SMARCAD1	100	96.887	Gorilla_gorilla
ENSSSCG00000009193	SMARCAD1	98	62.235	ENSHBUG00000011042	smarcad1a	96	62.235	Haplochromis_burtoni
ENSSSCG00000009193	SMARCAD1	100	96.552	ENSHGLG00000005070	SMARCAD1	100	94.665	Heterocephalus_glaber_female
ENSSSCG00000009193	SMARCAD1	100	96.552	ENSHGLG00100006812	SMARCAD1	100	94.665	Heterocephalus_glaber_male
ENSSSCG00000009193	SMARCAD1	99	63.919	ENSHCOG00000007848	smarcad1a	82	60.508	Hippocampus_comes
ENSSSCG00000009193	SMARCAD1	89	65.415	ENSIPUG00000000242	smarcad1a	92	60.918	Ictalurus_punctatus
ENSSSCG00000009193	SMARCAD1	99	56.789	ENSIPUG00000022817	smarcad1b	84	59.873	Ictalurus_punctatus
ENSSSCG00000009193	SMARCAD1	100	97.150	ENSSTOG00000001227	SMARCAD1	100	96.210	Ictidomys_tridecemlineatus
ENSSSCG00000009193	SMARCAD1	100	96.195	ENSJJAG00000022342	Smarcad1	100	94.553	Jaculus_jaculus
ENSSSCG00000009193	SMARCAD1	92	64.502	ENSKMAG00000021351	smarcad1a	78	61.142	Kryptolebias_marmoratus
ENSSSCG00000009193	SMARCAD1	93	65.821	ENSLBEG00000008088	smarcad1a	74	65.821	Labrus_bergylta
ENSSSCG00000009193	SMARCAD1	100	61.665	ENSLOCG00000012909	smarcad1a	100	55.705	Lepisosteus_oculatus
ENSSSCG00000009193	SMARCAD1	100	95.482	ENSLAFG00000000040	SMARCAD1	100	94.650	Loxodonta_africana
ENSSSCG00000009193	SMARCAD1	100	97.860	ENSMFAG00000042606	SMARCAD1	100	96.693	Macaca_fascicularis
ENSSSCG00000009193	SMARCAD1	100	97.860	ENSMMUG00000022242	SMARCAD1	99	97.413	Macaca_mulatta
ENSSSCG00000009193	SMARCAD1	100	97.741	ENSMNEG00000038117	SMARCAD1	100	98.658	Macaca_nemestrina
ENSSSCG00000009193	SMARCAD1	100	97.979	ENSMLEG00000038333	SMARCAD1	100	98.826	Mandrillus_leucophaeus
ENSSSCG00000009193	SMARCAD1	98	63.421	ENSMAMG00000000933	smarcad1a	92	63.245	Mastacembelus_armatus
ENSSSCG00000009193	SMARCAD1	97	62.393	ENSMZEG00005005203	smarcad1a	100	49.863	Maylandia_zebra
ENSSSCG00000009193	SMARCAD1	100	67.609	ENSMGAG00000005577	SMARCAD1	100	65.057	Meleagris_gallopavo
ENSSSCG00000009193	SMARCAD1	100	93.817	ENSMAUG00000008417	Smarcad1	100	92.607	Mesocricetus_auratus
ENSSSCG00000009193	SMARCAD1	100	96.560	ENSMICG00000009746	SMARCAD1	100	95.534	Microcebus_murinus
ENSSSCG00000009193	SMARCAD1	100	93.936	ENSMOCG00000017142	Smarcad1	100	92.315	Microtus_ochrogaster
ENSSSCG00000009193	SMARCAD1	94	58.868	ENSMMOG00000000275	smarcad1a	92	64.829	Mola_mola
ENSSSCG00000009193	SMARCAD1	100	85.884	ENSMODG00000019268	SMARCAD1	100	81.696	Monodelphis_domestica
ENSSSCG00000009193	SMARCAD1	100	93.103	MGP_CAROLIEiJ_G0028458	-	77	93.160	Mus_caroli
ENSSSCG00000009193	SMARCAD1	100	92.747	ENSMUSG00000029920	Smarcad1	100	91.448	Mus_musculus
ENSSSCG00000009193	SMARCAD1	100	93.103	MGP_PahariEiJ_G0022198	Smarcad1	100	91.837	Mus_pahari
ENSSSCG00000009193	SMARCAD1	100	92.866	MGP_SPRETEiJ_G0029462	Smarcad1	100	91.545	Mus_spretus
ENSSSCG00000009193	SMARCAD1	100	99.287	ENSMPUG00000002111	SMARCAD1	100	98.152	Mustela_putorius_furo
ENSSSCG00000009193	SMARCAD1	100	94.662	ENSMLUG00000000425	SMARCAD1	100	93.689	Myotis_lucifugus
ENSSSCG00000009193	SMARCAD1	100	96.195	ENSNGAG00000000810	Smarcad1	100	93.482	Nannospalax_galili
ENSSSCG00000009193	SMARCAD1	80	63.127	ENSNBRG00000012749	smarcad1a	85	61.236	Neolamprologus_brichardi
ENSSSCG00000009193	SMARCAD1	100	98.098	ENSNLEG00000014225	SMARCAD1	100	98.826	Nomascus_leucogenys
ENSSSCG00000009193	SMARCAD1	100	96.076	ENSODEG00000004334	SMARCAD1	100	93.404	Octodon_degus
ENSSSCG00000009193	SMARCAD1	77	65.895	ENSONIG00000015059	smarcad1a	100	52.132	Oreochromis_niloticus
ENSSSCG00000009193	SMARCAD1	98	85.145	ENSOANG00000013764	SMARCAD1	100	85.145	Ornithorhynchus_anatinus
ENSSSCG00000009193	SMARCAD1	100	97.027	ENSOCUG00000017283	SMARCAD1	100	96.012	Oryctolagus_cuniculus
ENSSSCG00000009193	SMARCAD1	92	65.060	ENSORLG00000004869	smarcad1a	80	61.326	Oryzias_latipes
ENSSSCG00000009193	SMARCAD1	93	65.060	ENSORLG00020020569	smarcad1a	92	61.295	Oryzias_latipes_hni
ENSSSCG00000009193	SMARCAD1	93	64.910	ENSORLG00015009045	smarcad1a	92	61.272	Oryzias_latipes_hsok
ENSSSCG00000009193	SMARCAD1	96	64.812	ENSOMEG00000023032	smarcad1a	81	60.935	Oryzias_melastigma
ENSSSCG00000009193	SMARCAD1	100	95.967	ENSOGAG00000011444	SMARCAD1	100	94.951	Otolemur_garnettii
ENSSSCG00000009193	SMARCAD1	100	98.573	ENSOARG00000017851	SMARCAD1	100	97.957	Ovis_aries
ENSSSCG00000009193	SMARCAD1	100	98.098	ENSPPAG00000035715	SMARCAD1	100	96.790	Pan_paniscus
ENSSSCG00000009193	SMARCAD1	100	99.049	ENSPPRG00000024756	SMARCAD1	100	99.497	Panthera_pardus
ENSSSCG00000009193	SMARCAD1	100	98.814	ENSPTIG00000017868	SMARCAD1	100	97.573	Panthera_tigris_altaica
ENSSSCG00000009193	SMARCAD1	100	98.098	ENSPTRG00000023126	SMARCAD1	100	98.826	Pan_troglodytes
ENSSSCG00000009193	SMARCAD1	100	96.445	ENSPANG00000019757	SMARCAD1	100	95.441	Papio_anubis
ENSSSCG00000009193	SMARCAD1	100	78.343	ENSPSIG00000010255	SMARCAD1	100	73.327	Pelodiscus_sinensis
ENSSSCG00000009193	SMARCAD1	76	64.541	ENSPMGG00000010735	smarcad1a	95	63.018	Periophthalmus_magnuspinnatus
ENSSSCG00000009193	SMARCAD1	100	81.451	ENSPEMG00000001854	Smarcad1	100	78.696	Peromyscus_maniculatus_bairdii
ENSSSCG00000009193	SMARCAD1	99	51.977	ENSPMAG00000003516	smarcad1a	99	47.243	Petromyzon_marinus
ENSSSCG00000009193	SMARCAD1	94	87.863	ENSPCIG00000008137	SMARCAD1	98	89.148	Phascolarctos_cinereus
ENSSSCG00000009193	SMARCAD1	93	66.615	ENSPFOG00000019116	smarcad1a	77	62.291	Poecilia_formosa
ENSSSCG00000009193	SMARCAD1	93	66.459	ENSPLAG00000000108	smarcad1a	77	62.151	Poecilia_latipinna
ENSSSCG00000009193	SMARCAD1	93	66.615	ENSPMEG00000009155	smarcad1a	77	62.291	Poecilia_mexicana
ENSSSCG00000009193	SMARCAD1	99	63.925	ENSPREG00000018185	smarcad1a	94	62.587	Poecilia_reticulata
ENSSSCG00000009193	SMARCAD1	100	97.390	ENSPPYG00000014935	SMARCAD1	100	96.214	Pongo_abelii
ENSSSCG00000009193	SMARCAD1	73	96.911	ENSPCOG00000020478	SMARCAD1	89	96.911	Propithecus_coquereli
ENSSSCG00000009193	SMARCAD1	100	96.323	ENSPVAG00000001760	SMARCAD1	100	95.340	Pteropus_vampyrus
ENSSSCG00000009193	SMARCAD1	82	62.029	ENSPNYG00000010087	smarcad1a	85	60.815	Pundamilia_nyererei
ENSSSCG00000009193	SMARCAD1	98	57.888	ENSPNAG00000010099	smarcad1b	84	60.252	Pygocentrus_nattereri
ENSSSCG00000009193	SMARCAD1	100	55.862	ENSPNAG00000001663	smarcad1a	90	54.863	Pygocentrus_nattereri
ENSSSCG00000009193	SMARCAD1	100	93.817	ENSRNOG00000006391	Smarcad1	100	92.420	Rattus_norvegicus
ENSSSCG00000009193	SMARCAD1	100	97.979	ENSRBIG00000041989	SMARCAD1	100	96.693	Rhinopithecus_bieti
ENSSSCG00000009193	SMARCAD1	100	97.979	ENSRROG00000035309	SMARCAD1	100	96.693	Rhinopithecus_roxellana
ENSSSCG00000009193	SMARCAD1	100	98.098	ENSSBOG00000032114	SMARCAD1	100	98.993	Saimiri_boliviensis_boliviensis
ENSSSCG00000009193	SMARCAD1	100	86.817	ENSSHAG00000001279	SMARCAD1	100	82.563	Sarcophilus_harrisii
ENSSSCG00000009193	SMARCAD1	100	56.009	ENSSFOG00015016814	smarcad1b	100	50.604	Scleropages_formosus
ENSSSCG00000009193	SMARCAD1	91	57.513	ENSSFOG00015020909	smarcad1a	100	57.513	Scleropages_formosus
ENSSSCG00000009193	SMARCAD1	98	63.688	ENSSMAG00000001326	smarcad1a	96	62.953	Scophthalmus_maximus
ENSSSCG00000009193	SMARCAD1	83	62.784	ENSSDUG00000022338	smarcad1a	84	62.343	Seriola_dumerili
ENSSSCG00000009193	SMARCAD1	97	62.358	ENSSLDG00000024986	smarcad1a	87	66.303	Seriola_lalandi_dorsalis
ENSSSCG00000009193	SMARCAD1	71	84.757	ENSSPUG00000004633	SMARCAD1	100	84.757	Sphenodon_punctatus
ENSSSCG00000009193	SMARCAD1	97	63.649	ENSSPAG00000001970	smarcad1a	96	62.570	Stegastes_partitus
ENSSSCG00000009193	SMARCAD1	93	77.934	ENSTGUG00000003127	SMARCAD1	100	78.189	Taeniopygia_guttata
ENSSSCG00000009193	SMARCAD1	100	58.205	ENSTNIG00000017585	smarcad1a	99	57.732	Tetraodon_nigroviridis
ENSSSCG00000009193	SMARCAD1	91	97.222	ENSTBEG00000002789	SMARCAD1	91	97.222	Tupaia_belangeri
ENSSSCG00000009193	SMARCAD1	100	98.812	ENSTTRG00000000226	SMARCAD1	100	97.123	Tursiops_truncatus
ENSSSCG00000009193	SMARCAD1	100	99.168	ENSUAMG00000022262	SMARCAD1	99	99.186	Ursus_americanus
ENSSSCG00000009193	SMARCAD1	100	99.168	ENSUMAG00000004549	SMARCAD1	100	97.957	Ursus_maritimus
ENSSSCG00000009193	SMARCAD1	100	98.811	ENSVVUG00000007271	SMARCAD1	100	98.811	Vulpes_vulpes
ENSSSCG00000009193	SMARCAD1	100	65.965	ENSXETG00000019214	smarcad1	100	65.909	Xenopus_tropicalis
ENSSSCG00000009193	SMARCAD1	92	59.459	ENSXCOG00000005232	smarcad1a	88	57.732	Xiphophorus_couchianus
ENSSSCG00000009193	SMARCAD1	93	66.303	ENSXMAG00000015350	smarcad1a	77	61.818	Xiphophorus_maculatus