EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000009310 (Gene tree)
Gene ID: 100627477
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 1608 bases
Position: chr11:5044332-5045939
Accession: 100627477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000009932	RNA_pol_L_2	PF13656.6	7.6e-28	1	1
ENSSSCP00000009932	RNA_pol_L	PF01193.24	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000010198	POLR1D-201	752	XM_003357811	ENSSSCP00000009932	133 (aa)	XP_003357859	F1RSW6

Gene Model

Click here to download ENSSSCG00000009310's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03020	RNA polymerase	KEGG
ssc04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000009310	POLR1D	77	33.333	ENSSSCG00000007688	-	85	33.333
ENSSSCG00000009310	POLR1D	59	32.051	ENSSSCG00000003703	-	56	32.051
ENSSSCG00000009310	POLR1D	100	62.406	ENSSSCG00000035282	-	91	62.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009310	POLR1D	100	94.737	ENSG00000186184	POLR1D	100	94.828	Homo_sapiens
ENSSSCG00000009310	POLR1D	76	68.317	ENSAPOG00000021882	polr1d	94	69.000	Acanthochromis_polyacanthus
ENSSSCG00000009310	POLR1D	94	95.200	ENSAMEG00000019095	POLR1D	100	95.200	Ailuropoda_melanoleuca
ENSSSCG00000009310	POLR1D	75	75.000	ENSACIG00000013328	polr1d	87	75.000	Amphilophus_citrinellus
ENSSSCG00000009310	POLR1D	80	69.159	ENSAOCG00000018500	polr1d	94	69.159	Amphiprion_ocellaris
ENSSSCG00000009310	POLR1D	79	69.524	ENSAPEG00000009489	polr1d	92	69.524	Amphiprion_percula
ENSSSCG00000009310	POLR1D	80	66.355	ENSATEG00000019322	polr1d	95	66.038	Anabas_testudineus
ENSSSCG00000009310	POLR1D	80	66.981	ENSACAG00000015753	POLR1D	91	66.981	Anolis_carolinensis
ENSSSCG00000009310	POLR1D	100	95.489	ENSANAG00000024486	POLR1D	100	95.489	Aotus_nancymaae
ENSSSCG00000009310	POLR1D	80	70.093	ENSACLG00000023805	polr1d	94	70.093	Astatotilapia_calliptera
ENSSSCG00000009310	POLR1D	78	69.231	ENSAMXG00000036118	polr1d	90	69.231	Astyanax_mexicanus
ENSSSCG00000009310	POLR1D	100	93.233	ENSBTAG00000008642	POLR1D	100	93.233	Bos_taurus
ENSSSCG00000009310	POLR1D	100	93.233	ENSBTAG00000033252	-	100	93.233	Bos_taurus
ENSSSCG00000009310	POLR1D	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSSSCG00000009310	POLR1D	100	94.737	ENSCJAG00000044669	POLR1D	100	94.737	Callithrix_jacchus
ENSSSCG00000009310	POLR1D	100	95.489	ENSCAFG00000006755	POLR1D	100	95.489	Canis_familiaris
ENSSSCG00000009310	POLR1D	100	93.985	ENSCHIG00000021910	POLR1D	100	93.985	Capra_hircus
ENSSSCG00000009310	POLR1D	96	80.769	ENSTSYG00000034852	-	96	82.759	Carlito_syrichta
ENSSSCG00000009310	POLR1D	93	90.323	ENSTSYG00000026817	-	93	90.323	Carlito_syrichta
ENSSSCG00000009310	POLR1D	97	53.488	ENSCAPG00000006058	-	100	53.488	Cavia_aperea
ENSSSCG00000009310	POLR1D	97	54.264	ENSCPOG00000030450	-	100	54.264	Cavia_porcellus
ENSSSCG00000009310	POLR1D	100	93.985	ENSCCAG00000021349	-	100	93.985	Cebus_capucinus
ENSSSCG00000009310	POLR1D	100	75.940	ENSCCAG00000020191	-	100	75.940	Cebus_capucinus
ENSSSCG00000009310	POLR1D	100	93.233	ENSCATG00000030710	-	100	93.233	Cercocebus_atys
ENSSSCG00000009310	POLR1D	100	83.459	ENSCATG00000022900	-	100	83.459	Cercocebus_atys
ENSSSCG00000009310	POLR1D	93	94.355	ENSCLAG00000017623	POLR1D	100	94.355	Chinchilla_lanigera
ENSSSCG00000009310	POLR1D	73	79.381	ENSCPBG00000004719	POLR1D	96	79.381	Chrysemys_picta_bellii
ENSSSCG00000009310	POLR1D	100	94.737	ENSCANG00000028632	-	100	94.737	Colobus_angolensis_palliatus
ENSSSCG00000009310	POLR1D	100	90.226	ENSCANG00000037694	-	100	90.226	Colobus_angolensis_palliatus
ENSSSCG00000009310	POLR1D	100	91.729	ENSCGRG00001021251	Polr1d	100	91.729	Cricetulus_griseus_chok1gshd
ENSSSCG00000009310	POLR1D	100	91.729	ENSCGRG00000011639	Polr1d	100	91.729	Cricetulus_griseus_crigri
ENSSSCG00000009310	POLR1D	78	69.231	ENSCSEG00000018268	polr1d	91	67.290	Cynoglossus_semilaevis
ENSSSCG00000009310	POLR1D	79	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSSSCG00000009310	POLR1D	81	64.815	ENSDARG00000037570	polr1d	96	64.815	Danio_rerio
ENSSSCG00000009310	POLR1D	100	92.481	ENSDNOG00000043676	-	100	92.481	Dasypus_novemcinctus
ENSSSCG00000009310	POLR1D	100	90.299	ENSDNOG00000046247	-	100	90.299	Dasypus_novemcinctus
ENSSSCG00000009310	POLR1D	100	91.729	ENSDORG00000029155	Polr1d	100	91.729	Dipodomys_ordii
ENSSSCG00000009310	POLR1D	65	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSSSCG00000009310	POLR1D	93	87.097	ENSETEG00000012797	POLR1D	100	87.097	Echinops_telfairi
ENSSSCG00000009310	POLR1D	65	71.264	ENSEBUG00000011748	polr1d	61	71.264	Eptatretus_burgeri
ENSSSCG00000009310	POLR1D	97	94.574	ENSEASG00005022487	POLR1D	100	94.574	Equus_asinus_asinus
ENSSSCG00000009310	POLR1D	93	93.548	ENSEEUG00000013144	POLR1D	100	93.548	Erinaceus_europaeus
ENSSSCG00000009310	POLR1D	78	70.192	ENSELUG00000005105	rpac2	91	70.192	Esox_lucius
ENSSSCG00000009310	POLR1D	100	95.489	ENSFCAG00000030162	POLR1D	100	95.489	Felis_catus
ENSSSCG00000009310	POLR1D	72	75.000	ENSFALG00000011463	POLR1D	95	75.000	Ficedula_albicollis
ENSSSCG00000009310	POLR1D	100	93.233	ENSFDAG00000004463	POLR1D	100	93.233	Fukomys_damarensis
ENSSSCG00000009310	POLR1D	78	73.077	ENSFHEG00000015410	polr1d	90	73.077	Fundulus_heteroclitus
ENSSSCG00000009310	POLR1D	79	71.429	ENSGAFG00000001693	polr1d	92	71.429	Gambusia_affinis
ENSSSCG00000009310	POLR1D	86	66.087	ENSGACG00000018585	polr1d	97	66.087	Gasterosteus_aculeatus
ENSSSCG00000009310	POLR1D	80	78.302	ENSGAGG00000008503	POLR1D	93	78.302	Gopherus_agassizii
ENSSSCG00000009310	POLR1D	100	94.737	ENSGGOG00000004235	POLR1D	100	94.737	Gorilla_gorilla
ENSSSCG00000009310	POLR1D	80	70.093	ENSHBUG00000002111	polr1d	94	70.093	Haplochromis_burtoni
ENSSSCG00000009310	POLR1D	100	93.233	ENSHGLG00000003202	POLR1D	100	93.233	Heterocephalus_glaber_female
ENSSSCG00000009310	POLR1D	100	93.233	ENSHGLG00100009393	POLR1D	100	93.233	Heterocephalus_glaber_male
ENSSSCG00000009310	POLR1D	78	70.192	ENSHCOG00000003258	polr1d	91	70.192	Hippocampus_comes
ENSSSCG00000009310	POLR1D	79	70.476	ENSIPUG00000014810	polr1d	91	70.476	Ictalurus_punctatus
ENSSSCG00000009310	POLR1D	100	95.489	ENSSTOG00000013877	POLR1D	100	95.489	Ictidomys_tridecemlineatus
ENSSSCG00000009310	POLR1D	95	71.429	ENSJJAG00000021667	-	75	71.429	Jaculus_jaculus
ENSSSCG00000009310	POLR1D	97	87.218	ENSJJAG00000022671	-	100	90.000	Jaculus_jaculus
ENSSSCG00000009310	POLR1D	80	66.038	ENSKMAG00000015256	polr1d	93	66.038	Kryptolebias_marmoratus
ENSSSCG00000009310	POLR1D	79	71.429	ENSLBEG00000015919	polr1d	92	71.429	Labrus_bergylta
ENSSSCG00000009310	POLR1D	86	65.789	ENSLACG00000006810	POLR1D	94	65.789	Latimeria_chalumnae
ENSSSCG00000009310	POLR1D	53	77.143	ENSLOCG00000014976	polr1d	95	77.143	Lepisosteus_oculatus
ENSSSCG00000009310	POLR1D	100	86.466	ENSLAFG00000032290	POLR1D	100	86.466	Loxodonta_africana
ENSSSCG00000009310	POLR1D	94	92.800	ENSMFAG00000045264	POLR1D	97	92.800	Macaca_fascicularis
ENSSSCG00000009310	POLR1D	87	93.966	ENSMMUG00000020386	POLR1D	100	93.966	Macaca_mulatta
ENSSSCG00000009310	POLR1D	100	74.436	ENSMMUG00000041570	-	100	74.436	Macaca_mulatta
ENSSSCG00000009310	POLR1D	100	77.444	ENSMNEG00000038120	-	100	77.444	Macaca_nemestrina
ENSSSCG00000009310	POLR1D	100	93.985	ENSMNEG00000008630	-	100	93.985	Macaca_nemestrina
ENSSSCG00000009310	POLR1D	100	83.459	ENSMLEG00000032251	-	100	83.459	Mandrillus_leucophaeus
ENSSSCG00000009310	POLR1D	100	93.985	ENSMLEG00000041048	-	100	93.985	Mandrillus_leucophaeus
ENSSSCG00000009310	POLR1D	77	69.608	ENSMAMG00000014834	polr1d	95	69.608	Mastacembelus_armatus
ENSSSCG00000009310	POLR1D	75	74.000	ENSMZEG00005006638	polr1d	88	74.000	Maylandia_zebra
ENSSSCG00000009310	POLR1D	69	77.174	ENSMGAG00000005322	POLR1D	84	77.174	Meleagris_gallopavo
ENSSSCG00000009310	POLR1D	100	91.729	ENSMAUG00000001946	Polr1d	100	91.729	Mesocricetus_auratus
ENSSSCG00000009310	POLR1D	99	78.788	ENSMICG00000007349	-	100	78.788	Microcebus_murinus
ENSSSCG00000009310	POLR1D	100	95.489	ENSMICG00000016883	-	100	95.489	Microcebus_murinus
ENSSSCG00000009310	POLR1D	99	91.667	ENSMOCG00000021288	Polr1d	99	91.667	Microtus_ochrogaster
ENSSSCG00000009310	POLR1D	80	67.290	ENSMMOG00000009605	polr1d	94	67.290	Mola_mola
ENSSSCG00000009310	POLR1D	80	83.019	ENSMODG00000023881	POLR1D	93	83.019	Monodelphis_domestica
ENSSSCG00000009310	POLR1D	84	66.071	ENSMALG00000010652	polr1d	95	66.071	Monopterus_albus
ENSSSCG00000009310	POLR1D	100	88.722	MGP_CAROLIEiJ_G0028034	Polr1d	100	88.722	Mus_caroli
ENSSSCG00000009310	POLR1D	100	88.722	ENSMUSG00000029642	Polr1d	100	88.722	Mus_musculus
ENSSSCG00000009310	POLR1D	100	87.970	MGP_PahariEiJ_G0024600	Polr1d	100	87.970	Mus_pahari
ENSSSCG00000009310	POLR1D	100	89.474	MGP_SPRETEiJ_G0029032	Polr1d	100	89.474	Mus_spretus
ENSSSCG00000009310	POLR1D	99	83.333	ENSMLUG00000004118	-	99	83.333	Myotis_lucifugus
ENSSSCG00000009310	POLR1D	100	93.233	ENSMLUG00000027169	-	100	93.233	Myotis_lucifugus
ENSSSCG00000009310	POLR1D	87	93.966	ENSNGAG00000006014	Polr1d	100	93.966	Nannospalax_galili
ENSSSCG00000009310	POLR1D	80	70.093	ENSNBRG00000020327	polr1d	94	70.093	Neolamprologus_brichardi
ENSSSCG00000009310	POLR1D	100	94.737	ENSNLEG00000000358	POLR1D	100	94.737	Nomascus_leucogenys
ENSSSCG00000009310	POLR1D	100	93.233	ENSODEG00000005294	-	100	93.233	Octodon_degus
ENSSSCG00000009310	POLR1D	100	78.947	ENSODEG00000014801	-	100	78.947	Octodon_degus
ENSSSCG00000009310	POLR1D	78	80.769	ENSOANG00000008708	-	96	80.769	Ornithorhynchus_anatinus
ENSSSCG00000009310	POLR1D	100	93.985	ENSOCUG00000015706	POLR1D	82	93.985	Oryctolagus_cuniculus
ENSSSCG00000009310	POLR1D	79	69.524	ENSORLG00000010257	polr1d	92	69.524	Oryzias_latipes
ENSSSCG00000009310	POLR1D	83	67.273	ENSORLG00020000533	polr1d	74	67.273	Oryzias_latipes_hni
ENSSSCG00000009310	POLR1D	84	67.857	ENSORLG00015013267	polr1d	74	67.857	Oryzias_latipes_hsok
ENSSSCG00000009310	POLR1D	86	67.544	ENSOMEG00000014912	polr1d	76	67.544	Oryzias_melastigma
ENSSSCG00000009310	POLR1D	100	93.985	ENSOGAG00000014601	POLR1D	100	93.985	Otolemur_garnettii
ENSSSCG00000009310	POLR1D	94	93.600	ENSOARG00000017005	POLR1D	96	93.600	Ovis_aries
ENSSSCG00000009310	POLR1D	100	93.985	ENSPPAG00000028138	POLR1D	100	93.985	Pan_paniscus
ENSSSCG00000009310	POLR1D	99	95.455	ENSPPRG00000003381	POLR1D	99	95.455	Panthera_pardus
ENSSSCG00000009310	POLR1D	93	95.161	ENSPTIG00000018137	POLR1D	93	95.161	Panthera_tigris_altaica
ENSSSCG00000009310	POLR1D	100	94.737	ENSPTRG00000005734	POLR1D	100	94.737	Pan_troglodytes
ENSSSCG00000009310	POLR1D	100	82.707	ENSPANG00000035051	-	100	82.707	Papio_anubis
ENSSSCG00000009310	POLR1D	100	93.985	ENSPANG00000020259	-	100	93.985	Papio_anubis
ENSSSCG00000009310	POLR1D	85	61.947	ENSPKIG00000021891	polr1d	89	50.893	Paramormyrops_kingsleyae
ENSSSCG00000009310	POLR1D	83	74.775	ENSPSIG00000011822	POLR1D	86	74.775	Pelodiscus_sinensis
ENSSSCG00000009310	POLR1D	79	70.476	ENSPMGG00000010359	polr1d	91	70.476	Periophthalmus_magnuspinnatus
ENSSSCG00000009310	POLR1D	88	59.322	ENSPMGG00000012998	POLR1D	87	59.322	Periophthalmus_magnuspinnatus
ENSSSCG00000009310	POLR1D	100	87.970	ENSPEMG00000006336	-	100	87.970	Peromyscus_maniculatus_bairdii
ENSSSCG00000009310	POLR1D	81	59.259	ENSPMAG00000004228	polr1d	91	59.259	Petromyzon_marinus
ENSSSCG00000009310	POLR1D	80	83.019	ENSPCIG00000001673	POLR1D	93	83.019	Phascolarctos_cinereus
ENSSSCG00000009310	POLR1D	79	71.429	ENSPFOG00000023343	polr1d	92	72.500	Poecilia_formosa
ENSSSCG00000009310	POLR1D	79	71.429	ENSPLAG00000009675	polr1d	92	71.429	Poecilia_latipinna
ENSSSCG00000009310	POLR1D	79	71.429	ENSPMEG00000004628	polr1d	92	71.429	Poecilia_mexicana
ENSSSCG00000009310	POLR1D	79	71.429	ENSPREG00000022032	polr1d	92	71.429	Poecilia_reticulata
ENSSSCG00000009310	POLR1D	100	94.737	ENSPCOG00000028175	POLR1D	100	94.737	Propithecus_coquereli
ENSSSCG00000009310	POLR1D	80	70.093	ENSPNYG00000000107	polr1d	94	70.093	Pundamilia_nyererei
ENSSSCG00000009310	POLR1D	76	67.327	ENSPNAG00000001512	polr1d	87	66.346	Pygocentrus_nattereri
ENSSSCG00000009310	POLR1D	100	90.226	ENSRBIG00000000336	-	100	90.226	Rhinopithecus_bieti
ENSSSCG00000009310	POLR1D	100	93.985	ENSRBIG00000036378	-	100	93.985	Rhinopithecus_bieti
ENSSSCG00000009310	POLR1D	100	93.985	ENSRROG00000042232	-	100	93.985	Rhinopithecus_roxellana
ENSSSCG00000009310	POLR1D	100	90.226	ENSRROG00000026751	-	100	90.226	Rhinopithecus_roxellana
ENSSSCG00000009310	POLR1D	90	45.000	YNL113W	RPC19	85	45.000	Saccharomyces_cerevisiae
ENSSSCG00000009310	POLR1D	90	87.500	ENSSBOG00000030146	-	88	87.500	Saimiri_boliviensis_boliviensis
ENSSSCG00000009310	POLR1D	100	95.489	ENSSBOG00000028482	-	100	95.489	Saimiri_boliviensis_boliviensis
ENSSSCG00000009310	POLR1D	86	77.193	ENSSHAG00000001190	POLR1D	88	77.193	Sarcophilus_harrisii
ENSSSCG00000009310	POLR1D	82	72.477	ENSSFOG00015011375	polr1d	96	72.477	Scleropages_formosus
ENSSSCG00000009310	POLR1D	80	67.290	ENSSMAG00000011861	polr1d	94	67.290	Scophthalmus_maximus
ENSSSCG00000009310	POLR1D	80	66.355	ENSSDUG00000011930	polr1d	94	66.355	Seriola_dumerili
ENSSSCG00000009310	POLR1D	86	62.609	ENSSLDG00000023871	polr1d	97	62.609	Seriola_lalandi_dorsalis
ENSSSCG00000009310	POLR1D	100	93.985	ENSSARG00000007840	POLR1D	100	93.985	Sorex_araneus
ENSSSCG00000009310	POLR1D	73	79.381	ENSSPUG00000005786	POLR1D	88	75.728	Sphenodon_punctatus
ENSSSCG00000009310	POLR1D	79	71.429	ENSSPAG00000011764	polr1d	92	71.429	Stegastes_partitus
ENSSSCG00000009310	POLR1D	72	75.000	ENSTGUG00000005450	POLR1D	100	75.000	Taeniopygia_guttata
ENSSSCG00000009310	POLR1D	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSSSCG00000009310	POLR1D	93	93.548	ENSTBEG00000007006	POLR1D	100	93.548	Tupaia_belangeri
ENSSSCG00000009310	POLR1D	100	95.489	ENSUAMG00000011413	POLR1D	100	95.489	Ursus_americanus
ENSSSCG00000009310	POLR1D	93	95.161	ENSUMAG00000016968	POLR1D	97	95.161	Ursus_maritimus
ENSSSCG00000009310	POLR1D	100	95.489	ENSVVUG00000009216	POLR1D	100	95.489	Vulpes_vulpes
ENSSSCG00000009310	POLR1D	77	72.549	ENSXCOG00000011731	polr1d	78	72.549	Xiphophorus_couchianus
ENSSSCG00000009310	POLR1D	74	74.490	ENSXMAG00000017538	polr1d	75	74.490	Xiphophorus_maculatus