EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000009395 (Gene tree)
Gene ID: 100157885
Gene Symbol: SETDB2
Alias: C13orf4|CLLD8|CLLL8|KMT1F
Full Name: SET domain bifurcated 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 46609 bases
Position: chr11:18251218-18297826
Accession: 100157885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000010026	MBD	PF01429.19	1.7e-07	1	1
ENSSSCP00000039625	MBD	PF01429.19	1.7e-07	1	1
ENSSSCP00000031639	MBD	PF01429.19	1.7e-07	1	1
ENSSSCP00000040352	MBD	PF01429.19	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000010294	SETDB2-204	2037	XM_013980512	ENSSSCP00000010026	678 (aa)	XP_013835966	F1RK20
ENSSSCT00000050377	SETDB2-202	5645	XM_013980507	ENSSSCP00000039625	695 (aa)	XP_013835961	A0A287A6Q2
ENSSSCT00000048559	SETDB2-203	6322	XM_003130966	ENSSSCP00000031639	700 (aa)	XP_003131014	A0A287A971
ENSSSCT00000048316	SETDB2-201	6918	-	ENSSSCP00000040352	700 (aa)	-	A0A287A971

Gene Model

Click here to download ENSSSCG00000009395's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009395	SETDB2	100	80.905	ENSG00000136169	SETDB2	100	80.905	Homo_sapiens
ENSSSCG00000009395	SETDB2	54	58.333	ENSAPOG00000020220	-	85	58.333	Acanthochromis_polyacanthus
ENSSSCG00000009395	SETDB2	99	86.667	ENSAMEG00000003443	SETDB2	69	86.667	Ailuropoda_melanoleuca
ENSSSCG00000009395	SETDB2	66	54.430	ENSACIG00000009349	-	75	54.430	Amphilophus_citrinellus
ENSSSCG00000009395	SETDB2	67	54.762	ENSAOCG00000006560	-	76	54.762	Amphiprion_ocellaris
ENSSSCG00000009395	SETDB2	67	54.762	ENSAPEG00000009529	-	76	54.762	Amphiprion_percula
ENSSSCG00000009395	SETDB2	66	52.222	ENSATEG00000008915	-	62	52.222	Anabas_testudineus
ENSSSCG00000009395	SETDB2	99	47.214	ENSAPLG00000009061	SETDB2	100	47.214	Anas_platyrhynchos
ENSSSCG00000009395	SETDB2	100	43.430	ENSACAG00000014036	SETDB2	100	43.707	Anolis_carolinensis
ENSSSCG00000009395	SETDB2	93	80.220	ENSANAG00000028107	SETDB2	100	80.220	Aotus_nancymaae
ENSSSCG00000009395	SETDB2	68	51.190	ENSACLG00000004046	-	76	51.190	Astatotilapia_calliptera
ENSSSCG00000009395	SETDB2	99	32.365	ENSAMXG00000016092	setdb2	99	32.361	Astyanax_mexicanus
ENSSSCG00000009395	SETDB2	100	86.143	ENSBTAG00000007329	SETDB2	100	86.143	Bos_taurus
ENSSSCG00000009395	SETDB2	100	80.764	ENSCJAG00000008864	SETDB2	100	80.764	Callithrix_jacchus
ENSSSCG00000009395	SETDB2	100	83.871	ENSCAFG00000004341	SETDB2	100	83.871	Canis_familiaris
ENSSSCG00000009395	SETDB2	100	85.269	ENSCAFG00020020283	SETDB2	100	85.269	Canis_lupus_dingo
ENSSSCG00000009395	SETDB2	100	85.286	ENSCHIG00000014895	SETDB2	100	85.286	Capra_hircus
ENSSSCG00000009395	SETDB2	100	82.386	ENSTSYG00000014051	SETDB2	99	82.386	Carlito_syrichta
ENSSSCG00000009395	SETDB2	70	70.552	ENSCAPG00000014168	-	98	70.552	Cavia_aperea
ENSSSCG00000009395	SETDB2	92	73.313	ENSCPOG00000002194	SETDB2	97	73.313	Cavia_porcellus
ENSSSCG00000009395	SETDB2	100	80.622	ENSCCAG00000031604	SETDB2	100	80.622	Cebus_capucinus
ENSSSCG00000009395	SETDB2	100	80.622	ENSCATG00000002055	SETDB2	100	80.622	Cercocebus_atys
ENSSSCG00000009395	SETDB2	100	75.813	ENSCLAG00000007348	SETDB2	100	75.813	Chinchilla_lanigera
ENSSSCG00000009395	SETDB2	100	80.339	ENSCSAG00000017713	SETDB2	100	80.339	Chlorocebus_sabaeus
ENSSSCG00000009395	SETDB2	94	43.271	ENSCPBG00000008524	SETDB2	92	42.302	Chrysemys_picta_bellii
ENSSSCG00000009395	SETDB2	100	75.770	ENSCANG00000033506	SETDB2	100	75.559	Colobus_angolensis_palliatus
ENSSSCG00000009395	SETDB2	100	69.676	ENSCGRG00001011194	Setdb2	100	69.676	Cricetulus_griseus_chok1gshd
ENSSSCG00000009395	SETDB2	100	69.676	ENSCGRG00000000801	Setdb2	100	69.676	Cricetulus_griseus_crigri
ENSSSCG00000009395	SETDB2	67	57.647	ENSCVAG00000004116	-	77	57.647	Cyprinodon_variegatus
ENSSSCG00000009395	SETDB2	57	63.793	ENSDARG00000101462	setdb2	68	64.912	Danio_rerio
ENSSSCG00000009395	SETDB2	100	77.191	ENSDNOG00000033679	SETDB2	100	77.191	Dasypus_novemcinctus
ENSSSCG00000009395	SETDB2	100	69.930	ENSDORG00000026163	Setdb2	100	69.930	Dipodomys_ordii
ENSSSCG00000009395	SETDB2	81	80.556	ENSETEG00000004821	SETDB2	81	80.556	Echinops_telfairi
ENSSSCG00000009395	SETDB2	100	86.429	ENSEASG00005017285	SETDB2	100	86.383	Equus_asinus_asinus
ENSSSCG00000009395	SETDB2	100	86.571	ENSECAG00000020357	SETDB2	100	86.525	Equus_caballus
ENSSSCG00000009395	SETDB2	99	75.387	ENSEEUG00000011247	SETDB2	100	75.387	Erinaceus_europaeus
ENSSSCG00000009395	SETDB2	99	31.414	ENSELUG00000024242	-	95	30.993	Esox_lucius
ENSSSCG00000009395	SETDB2	100	86.241	ENSFCAG00000012034	SETDB2	100	86.241	Felis_catus
ENSSSCG00000009395	SETDB2	100	47.059	ENSFALG00000008379	SETDB2	97	47.059	Ficedula_albicollis
ENSSSCG00000009395	SETDB2	100	76.944	ENSFDAG00000017408	SETDB2	100	76.944	Fukomys_damarensis
ENSSSCG00000009395	SETDB2	100	45.568	ENSGALG00000017006	SETDB2	97	45.202	Gallus_gallus
ENSSSCG00000009395	SETDB2	70	50.485	ENSGAFG00000000077	-	80	50.485	Gambusia_affinis
ENSSSCG00000009395	SETDB2	67	54.321	ENSGACG00000015463	-	76	54.321	Gasterosteus_aculeatus
ENSSSCG00000009395	SETDB2	100	49.374	ENSGAGG00000014099	SETDB2	96	49.715	Gopherus_agassizii
ENSSSCG00000009395	SETDB2	100	80.764	ENSGGOG00000016016	SETDB2	100	80.764	Gorilla_gorilla
ENSSSCG00000009395	SETDB2	68	51.190	ENSHBUG00000001477	-	76	51.190	Haplochromis_burtoni
ENSSSCG00000009395	SETDB2	100	77.935	ENSHGLG00000003820	SETDB2	99	77.935	Heterocephalus_glaber_female
ENSSSCG00000009395	SETDB2	100	78.076	ENSHGLG00100008642	SETDB2	99	78.076	Heterocephalus_glaber_male
ENSSSCG00000009395	SETDB2	74	58.065	ENSIPUG00000011157	setdb2	84	58.065	Ictalurus_punctatus
ENSSSCG00000009395	SETDB2	100	78.612	ENSSTOG00000002985	SETDB2	100	78.612	Ictidomys_tridecemlineatus
ENSSSCG00000009395	SETDB2	99	69.615	ENSJJAG00000011079	Setdb2	99	69.615	Jaculus_jaculus
ENSSSCG00000009395	SETDB2	76	51.190	ENSKMAG00000012100	-	97	48.611	Kryptolebias_marmoratus
ENSSSCG00000009395	SETDB2	100	39.653	ENSLACG00000009640	SETDB2	99	39.103	Latimeria_chalumnae
ENSSSCG00000009395	SETDB2	69	52.885	ENSLOCG00000009739	-	88	52.885	Lepisosteus_oculatus
ENSSSCG00000009395	SETDB2	100	78.056	ENSLAFG00000012612	SETDB2	100	78.056	Loxodonta_africana
ENSSSCG00000009395	SETDB2	100	80.481	ENSMFAG00000032631	SETDB2	100	80.481	Macaca_fascicularis
ENSSSCG00000009395	SETDB2	100	80.481	ENSMMUG00000013473	SETDB2	100	80.481	Macaca_mulatta
ENSSSCG00000009395	SETDB2	100	80.198	ENSMNEG00000037148	SETDB2	100	80.198	Macaca_nemestrina
ENSSSCG00000009395	SETDB2	100	80.481	ENSMLEG00000043613	SETDB2	100	80.481	Mandrillus_leucophaeus
ENSSSCG00000009395	SETDB2	73	43.662	ENSMAMG00000022781	-	84	43.662	Mastacembelus_armatus
ENSSSCG00000009395	SETDB2	68	51.190	ENSMZEG00005012098	-	76	51.190	Maylandia_zebra
ENSSSCG00000009395	SETDB2	100	44.856	ENSMGAG00000015017	SETDB2	100	44.795	Meleagris_gallopavo
ENSSSCG00000009395	SETDB2	100	69.405	ENSMAUG00000012871	Setdb2	100	69.405	Mesocricetus_auratus
ENSSSCG00000009395	SETDB2	100	80.764	ENSMICG00000012641	SETDB2	100	80.764	Microcebus_murinus
ENSSSCG00000009395	SETDB2	100	65.722	ENSMOCG00000021987	Setdb2	100	65.722	Microtus_ochrogaster
ENSSSCG00000009395	SETDB2	100	54.167	ENSMODG00000010929	SETDB2	100	54.444	Monodelphis_domestica
ENSSSCG00000009395	SETDB2	67	53.571	ENSMALG00000001256	-	93	31.593	Monopterus_albus
ENSSSCG00000009395	SETDB2	100	65.248	MGP_CAROLIEiJ_G0019367	Setdb2	100	65.248	Mus_caroli
ENSSSCG00000009395	SETDB2	100	65.106	ENSMUSG00000071350	Setdb2	100	65.106	Mus_musculus
ENSSSCG00000009395	SETDB2	100	65.532	MGP_PahariEiJ_G0030385	Setdb2	100	65.532	Mus_pahari
ENSSSCG00000009395	SETDB2	100	65.248	MGP_SPRETEiJ_G0020259	Setdb2	100	65.248	Mus_spretus
ENSSSCG00000009395	SETDB2	100	84.571	ENSMPUG00000018019	SETDB2	99	84.571	Mustela_putorius_furo
ENSSSCG00000009395	SETDB2	100	80.286	ENSMLUG00000004378	SETDB2	99	80.286	Myotis_lucifugus
ENSSSCG00000009395	SETDB2	100	74.752	ENSNGAG00000013911	Setdb2	100	74.752	Nannospalax_galili
ENSSSCG00000009395	SETDB2	53	36.944	ENSNBRG00000022486	-	72	35.958	Neolamprologus_brichardi
ENSSSCG00000009395	SETDB2	100	80.905	ENSNLEG00000003613	SETDB2	100	80.905	Nomascus_leucogenys
ENSSSCG00000009395	SETDB2	94	47.563	ENSMEUG00000005220	-	100	47.858	Notamacropus_eugenii
ENSSSCG00000009395	SETDB2	82	80.000	ENSOPRG00000012261	SETDB2	83	76.657	Ochotona_princeps
ENSSSCG00000009395	SETDB2	72	38.462	ENSONIG00000009000	-	89	38.462	Oreochromis_niloticus
ENSSSCG00000009395	SETDB2	99	53.693	ENSOANG00000015546	SETDB2	93	54.674	Ornithorhynchus_anatinus
ENSSSCG00000009395	SETDB2	100	77.008	ENSOCUG00000003755	SETDB2	100	77.008	Oryctolagus_cuniculus
ENSSSCG00000009395	SETDB2	67	54.118	ENSORLG00000001147	-	75	54.118	Oryzias_latipes
ENSSSCG00000009395	SETDB2	68	54.118	ENSORLG00020006680	-	78	54.118	Oryzias_latipes_hni
ENSSSCG00000009395	SETDB2	64	67.241	ENSORLG00015009952	-	73	67.241	Oryzias_latipes_hsok
ENSSSCG00000009395	SETDB2	99	75.749	ENSOGAG00000005339	SETDB2	99	75.749	Otolemur_garnettii
ENSSSCG00000009395	SETDB2	100	85.143	ENSOARG00000008487	SETDB2	100	85.143	Ovis_aries
ENSSSCG00000009395	SETDB2	100	81.047	ENSPPAG00000039854	SETDB2	100	81.047	Pan_paniscus
ENSSSCG00000009395	SETDB2	100	85.957	ENSPPRG00000000069	SETDB2	100	85.957	Panthera_pardus
ENSSSCG00000009395	SETDB2	100	86.241	ENSPTIG00000006314	SETDB2	100	86.241	Panthera_tigris_altaica
ENSSSCG00000009395	SETDB2	100	80.905	ENSPTRG00000005873	SETDB2	100	80.905	Pan_troglodytes
ENSSSCG00000009395	SETDB2	100	80.481	ENSPANG00000017051	SETDB2	100	80.481	Papio_anubis
ENSSSCG00000009395	SETDB2	73	62.353	ENSPKIG00000009795	-	83	62.353	Paramormyrops_kingsleyae
ENSSSCG00000009395	SETDB2	100	45.455	ENSPSIG00000002200	SETDB2	95	45.418	Pelodiscus_sinensis
ENSSSCG00000009395	SETDB2	100	54.951	ENSPCIG00000002912	SETDB2	100	55.230	Phascolarctos_cinereus
ENSSSCG00000009395	SETDB2	90	43.704	ENSPFOG00000006673	-	94	43.704	Poecilia_formosa
ENSSSCG00000009395	SETDB2	90	44.444	ENSPLAG00000016914	-	94	44.444	Poecilia_latipinna
ENSSSCG00000009395	SETDB2	90	44.444	ENSPMEG00000003842	-	94	44.444	Poecilia_mexicana
ENSSSCG00000009395	SETDB2	74	41.045	ENSPREG00000022531	-	85	41.045	Poecilia_reticulata
ENSSSCG00000009395	SETDB2	100	80.198	ENSPPYG00000005368	SETDB2	100	80.198	Pongo_abelii
ENSSSCG00000009395	SETDB2	58	97.059	ENSPCAG00000010230	-	58	97.059	Procavia_capensis
ENSSSCG00000009395	SETDB2	97	79.758	ENSPCOG00000017644	SETDB2	99	81.818	Propithecus_coquereli
ENSSSCG00000009395	SETDB2	95	87.755	ENSPVAG00000006911	SETDB2	100	79.498	Pteropus_vampyrus
ENSSSCG00000009395	SETDB2	53	51.190	ENSPNYG00000023676	-	66	51.190	Pundamilia_nyererei
ENSSSCG00000009395	SETDB2	75	61.176	ENSPNAG00000011459	setdb2	86	57.292	Pygocentrus_nattereri
ENSSSCG00000009395	SETDB2	100	64.571	ENSRNOG00000021680	Setdb2	100	64.568	Rattus_norvegicus
ENSSSCG00000009395	SETDB2	100	80.905	ENSRBIG00000006562	SETDB2	100	80.905	Rhinopithecus_bieti
ENSSSCG00000009395	SETDB2	100	80.764	ENSRROG00000032499	SETDB2	100	80.764	Rhinopithecus_roxellana
ENSSSCG00000009395	SETDB2	100	81.047	ENSSBOG00000023249	SETDB2	100	81.047	Saimiri_boliviensis_boliviensis
ENSSSCG00000009395	SETDB2	100	54.017	ENSSHAG00000007281	SETDB2	100	54.155	Sarcophilus_harrisii
ENSSSCG00000009395	SETDB2	68	61.364	ENSSFOG00015008204	-	99	32.540	Scleropages_formosus
ENSSSCG00000009395	SETDB2	50	54.545	ENSSMAG00000000035	-	68	54.545	Scophthalmus_maximus
ENSSSCG00000009395	SETDB2	67	53.488	ENSSDUG00000002987	-	73	53.488	Seriola_dumerili
ENSSSCG00000009395	SETDB2	67	54.651	ENSSLDG00000015081	-	73	54.651	Seriola_lalandi_dorsalis
ENSSSCG00000009395	SETDB2	100	77.195	ENSSARG00000009926	SETDB2	100	77.195	Sorex_araneus
ENSSSCG00000009395	SETDB2	62	71.111	ENSSPAG00000006869	-	75	71.111	Stegastes_partitus
ENSSSCG00000009395	SETDB2	55	50.785	ENSTGUG00000012159	SETDB2	93	50.785	Taeniopygia_guttata
ENSSSCG00000009395	SETDB2	87	97.436	ENSTBEG00000008013	SETDB2	90	97.436	Tupaia_belangeri
ENSSSCG00000009395	SETDB2	100	85.286	ENSTTRG00000012932	SETDB2	100	85.286	Tursiops_truncatus
ENSSSCG00000009395	SETDB2	100	86.809	ENSUMAG00000018406	SETDB2	100	86.809	Ursus_maritimus
ENSSSCG00000009395	SETDB2	100	82.958	ENSVPAG00000012019	SETDB2	100	82.958	Vicugna_pacos
ENSSSCG00000009395	SETDB2	88	79.504	ENSVVUG00000028174	SETDB2	91	82.799	Vulpes_vulpes
ENSSSCG00000009395	SETDB2	99	40.541	ENSXETG00000015666	setdb2	99	40.541	Xenopus_tropicalis
ENSSSCG00000009395	SETDB2	81	37.766	ENSXMAG00000006323	-	89	37.766	Xiphophorus_maculatus