EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000009522 (Gene tree)
Gene ID: 100524103
Gene Symbol: PCCA
Alias: -
Full Name: propionyl-CoA carboxylase subunit alpha
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 380427 bases
Position: chr11:68920906-69301332
Accession: 100524103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000059078	RimK	PF08443.11	4.7e-05	1	1
ENSSSCP00000037907	RimK	PF08443.11	5.2e-05	1	1
ENSSSCP00000044870	RimK	PF08443.11	5.3e-05	1	1
ENSSSCP00000051580	RimK	PF08443.11	5.5e-05	1	1
ENSSSCP00000046198	RimK	PF08443.11	6.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000038021	PCCA-203	2398	XM_021065867	ENSSSCP00000037907	691 (aa)	XP_020921526	A0A287A1V2
ENSSSCT00000054459	PCCA-206	2419	-	ENSSSCP00000044870	712 (aa)	-	A0A287ALU0
ENSSSCT00000010440	PCCA-202	2135	-	ENSSSCP00000010169	686 (aa)	-	F1RP22
ENSSSCT00000051470	PCCA-204	2362	-	ENSSSCP00000046198	683 (aa)	-	A0A287AQ80
ENSSSCT00000062011	PCCA-201	2168	-	ENSSSCP00000059078	697 (aa)	-	A0A287BRL7
ENSSSCT00000056816	PCCA-205	5574	XM_021065866	ENSSSCP00000051580	730 (aa)	XP_020921525	A0A287B5L2

Gene Model

Click here to download ENSSSCG00000009522's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00280	Valine, leucine and isoleucine degradation	KEGG
ssc00630	Glyoxylate and dicarboxylate metabolism	KEGG
ssc00640	Propanoate metabolism	KEGG
ssc01100	Metabolic pathways	KEGG
ssc01200	Carbon metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000009522	PCCA	91	39.695	ENSSSCG00000025942	MCCC1	98	36.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009522	PCCA	100	89.751	ENSG00000175198	PCCA	99	92.722	Homo_sapiens
ENSSSCG00000009522	PCCA	91	76.032	ENSAPOG00000002389	pcca	100	76.161	Acanthochromis_polyacanthus
ENSSSCG00000009522	PCCA	91	93.858	ENSAMEG00000016627	PCCA	100	93.858	Ailuropoda_melanoleuca
ENSSSCG00000009522	PCCA	84	82.353	ENSACIG00000015913	PCCA	98	82.353	Amphilophus_citrinellus
ENSSSCG00000009522	PCCA	98	75.140	ENSAOCG00000005451	pcca	99	75.140	Amphiprion_ocellaris
ENSSSCG00000009522	PCCA	98	74.755	ENSAPEG00000002955	pcca	99	74.755	Amphiprion_percula
ENSSSCG00000009522	PCCA	96	75.000	ENSATEG00000004273	pcca	98	76.606	Anabas_testudineus
ENSSSCG00000009522	PCCA	95	84.971	ENSAPLG00000002609	PCCA	100	84.971	Anas_platyrhynchos
ENSSSCG00000009522	PCCA	100	90.188	ENSANAG00000031162	PCCA	100	90.188	Aotus_nancymaae
ENSSSCG00000009522	PCCA	96	76.387	ENSACLG00000006725	pcca	93	78.571	Astatotilapia_calliptera
ENSSSCG00000009522	PCCA	100	92.387	ENSBTAG00000010672	PCCA	100	92.387	Bos_taurus
ENSSSCG00000009522	PCCA	100	89.726	ENSCJAG00000020998	PCCA	100	89.726	Callithrix_jacchus
ENSSSCG00000009522	PCCA	100	93.434	ENSCAFG00000005838	PCCA	100	93.434	Canis_familiaris
ENSSSCG00000009522	PCCA	100	93.434	ENSCAFG00020022683	PCCA	100	93.434	Canis_lupus_dingo
ENSSSCG00000009522	PCCA	100	92.192	ENSCHIG00000007335	PCCA	100	92.192	Capra_hircus
ENSSSCG00000009522	PCCA	95	92.284	ENSTSYG00000000053	PCCA	95	92.975	Carlito_syrichta
ENSSSCG00000009522	PCCA	100	89.452	ENSCPOG00000011274	PCCA	100	89.452	Cavia_porcellus
ENSSSCG00000009522	PCCA	100	89.898	ENSCCAG00000022253	PCCA	100	89.898	Cebus_capucinus
ENSSSCG00000009522	PCCA	100	90.922	ENSCATG00000034177	PCCA	100	90.922	Cercocebus_atys
ENSSSCG00000009522	PCCA	100	90.000	ENSCLAG00000003205	PCCA	100	90.000	Chinchilla_lanigera
ENSSSCG00000009522	PCCA	100	90.548	ENSCSAG00000017493	PCCA	100	90.548	Chlorocebus_sabaeus
ENSSSCG00000009522	PCCA	89	85.547	ENSCHOG00000000247	PCCA	90	85.547	Choloepus_hoffmanni
ENSSSCG00000009522	PCCA	96	83.714	ENSCPBG00000018046	PCCA	97	83.714	Chrysemys_picta_bellii
ENSSSCG00000009522	PCCA	92	63.501	ENSCING00000008081	-	95	63.501	Ciona_intestinalis
ENSSSCG00000009522	PCCA	92	62.815	ENSCSAVG00000011361	-	100	62.815	Ciona_savignyi
ENSSSCG00000009522	PCCA	100	90.337	ENSCANG00000013062	PCCA	100	90.337	Colobus_angolensis_palliatus
ENSSSCG00000009522	PCCA	100	87.534	ENSCGRG00001015819	Pcca	100	87.534	Cricetulus_griseus_chok1gshd
ENSSSCG00000009522	PCCA	98	88.252	ENSCGRG00000014796	Pcca	100	87.397	Cricetulus_griseus_crigri
ENSSSCG00000009522	PCCA	96	74.000	ENSCSEG00000016645	pcca	98	74.000	Cynoglossus_semilaevis
ENSSSCG00000009522	PCCA	91	77.157	ENSCVAG00000010430	pcca	95	84.055	Cyprinodon_variegatus
ENSSSCG00000009522	PCCA	100	89.452	ENSDNOG00000042384	PCCA	100	90.867	Dasypus_novemcinctus
ENSSSCG00000009522	PCCA	100	75.424	ENSDORG00000012949	Pcca	100	75.424	Dipodomys_ordii
ENSSSCG00000009522	PCCA	100	94.118	ENSEASG00005022166	PCCA	100	93.288	Equus_asinus_asinus
ENSSSCG00000009522	PCCA	98	93.838	ENSECAG00000018952	PCCA	100	93.151	Equus_caballus
ENSSSCG00000009522	PCCA	92	75.591	ENSELUG00000002383	pcca	100	76.435	Esox_lucius
ENSSSCG00000009522	PCCA	100	94.290	ENSFCAG00000012573	PCCA	100	94.290	Felis_catus
ENSSSCG00000009522	PCCA	100	88.904	ENSFDAG00000005817	PCCA	97	88.904	Fukomys_damarensis
ENSSSCG00000009522	PCCA	96	74.714	ENSFHEG00000011811	pcca	98	74.714	Fundulus_heteroclitus
ENSSSCG00000009522	PCCA	95	75.775	ENSGAFG00000011218	pcca	96	75.775	Gambusia_affinis
ENSSSCG00000009522	PCCA	91	77.143	ENSGACG00000002342	pcca	100	77.301	Gasterosteus_aculeatus
ENSSSCG00000009522	PCCA	91	85.556	ENSGAGG00000010472	PCCA	95	85.443	Gopherus_agassizii
ENSSSCG00000009522	PCCA	100	90.044	ENSGGOG00000012516	PCCA	100	90.044	Gorilla_gorilla
ENSSSCG00000009522	PCCA	100	89.315	ENSHGLG00000011057	PCCA	100	89.315	Heterocephalus_glaber_female
ENSSSCG00000009522	PCCA	100	89.315	ENSHGLG00100001468	PCCA	100	89.315	Heterocephalus_glaber_male
ENSSSCG00000009522	PCCA	98	73.633	ENSHCOG00000016098	pcca	100	75.851	Hippocampus_comes
ENSSSCG00000009522	PCCA	95	90.791	ENSSTOG00000021045	PCCA	100	90.791	Ictidomys_tridecemlineatus
ENSSSCG00000009522	PCCA	100	87.945	ENSJJAG00000011150	Pcca	100	87.945	Jaculus_jaculus
ENSSSCG00000009522	PCCA	95	75.466	ENSKMAG00000014632	pcca	98	75.466	Kryptolebias_marmoratus
ENSSSCG00000009522	PCCA	93	82.271	ENSLACG00000012828	PCCA	100	83.591	Latimeria_chalumnae
ENSSSCG00000009522	PCCA	92	91.045	ENSLAFG00000014958	PCCA	100	91.045	Loxodonta_africana
ENSSSCG00000009522	PCCA	100	90.776	ENSMFAG00000020427	PCCA	100	90.776	Macaca_fascicularis
ENSSSCG00000009522	PCCA	100	90.483	ENSMMUG00000004493	PCCA	100	90.483	Macaca_mulatta
ENSSSCG00000009522	PCCA	100	90.630	ENSMNEG00000045261	PCCA	100	90.630	Macaca_nemestrina
ENSSSCG00000009522	PCCA	100	90.922	ENSMLEG00000033842	PCCA	100	90.922	Mandrillus_leucophaeus
ENSSSCG00000009522	PCCA	92	76.935	ENSMAMG00000009304	pcca	94	76.935	Mastacembelus_armatus
ENSSSCG00000009522	PCCA	92	78.571	ENSMZEG00005018487	pcca	93	78.571	Maylandia_zebra
ENSSSCG00000009522	PCCA	61	89.713	ENSMGAG00000014892	PCCA	99	89.713	Meleagris_gallopavo
ENSSSCG00000009522	PCCA	100	85.962	ENSMAUG00000000626	Pcca	100	85.962	Mesocricetus_auratus
ENSSSCG00000009522	PCCA	100	92.094	ENSMICG00000010685	-	100	92.094	Microcebus_murinus
ENSSSCG00000009522	PCCA	71	88.296	ENSMICG00000038258	-	96	87.280	Microcebus_murinus
ENSSSCG00000009522	PCCA	100	87.808	ENSMOCG00000015156	Pcca	100	87.808	Microtus_ochrogaster
ENSSSCG00000009522	PCCA	97	74.221	ENSMALG00000009947	pcca	100	76.708	Monopterus_albus
ENSSSCG00000009522	PCCA	100	88.219	MGP_CAROLIEiJ_G0019618	Pcca	100	88.219	Mus_caroli
ENSSSCG00000009522	PCCA	100	88.082	ENSMUSG00000041650	Pcca	100	88.082	Mus_musculus
ENSSSCG00000009522	PCCA	100	88.493	MGP_PahariEiJ_G0030634	Pcca	100	88.493	Mus_pahari
ENSSSCG00000009522	PCCA	100	87.945	MGP_SPRETEiJ_G0020515	Pcca	100	87.945	Mus_spretus
ENSSSCG00000009522	PCCA	94	94.745	ENSMPUG00000011333	PCCA	100	94.745	Mustela_putorius_furo
ENSSSCG00000009522	PCCA	86	91.980	ENSMLUG00000005729	PCCA	99	92.123	Myotis_lucifugus
ENSSSCG00000009522	PCCA	100	83.787	ENSNGAG00000016528	Pcca	100	83.787	Nannospalax_galili
ENSSSCG00000009522	PCCA	72	75.584	ENSNBRG00000019075	pcca	96	75.584	Neolamprologus_brichardi
ENSSSCG00000009522	PCCA	100	86.551	ENSODEG00000010667	PCCA	100	86.551	Octodon_degus
ENSSSCG00000009522	PCCA	96	76.136	ENSONIG00000013151	pcca	97	76.136	Oreochromis_niloticus
ENSSSCG00000009522	PCCA	93	90.394	ENSOCUG00000017230	PCCA	96	90.534	Oryctolagus_cuniculus
ENSSSCG00000009522	PCCA	97	72.524	ENSORLG00000000361	pcca	99	72.524	Oryzias_latipes
ENSSSCG00000009522	PCCA	97	72.803	ENSORLG00020005749	pcca	99	72.803	Oryzias_latipes_hni
ENSSSCG00000009522	PCCA	97	72.803	ENSORLG00015012738	pcca	99	72.803	Oryzias_latipes_hsok
ENSSSCG00000009522	PCCA	97	73.603	ENSOMEG00000001912	pcca	99	74.844	Oryzias_melastigma
ENSSSCG00000009522	PCCA	100	90.000	ENSOGAG00000017088	PCCA	100	90.000	Otolemur_garnettii
ENSSSCG00000009522	PCCA	91	94.444	ENSOARG00000004442	PCCA	100	94.427	Ovis_aries
ENSSSCG00000009522	PCCA	100	90.044	ENSPPAG00000036841	PCCA	100	90.044	Pan_paniscus
ENSSSCG00000009522	PCCA	100	94.143	ENSPPRG00000006626	PCCA	100	94.143	Panthera_pardus
ENSSSCG00000009522	PCCA	91	95.397	ENSPTIG00000009732	PCCA	100	95.540	Panthera_tigris_altaica
ENSSSCG00000009522	PCCA	100	89.898	ENSPTRG00000006001	PCCA	100	89.898	Pan_troglodytes
ENSSSCG00000009522	PCCA	96	79.020	ENSPKIG00000004765	pcca	98	79.020	Paramormyrops_kingsleyae
ENSSSCG00000009522	PCCA	91	84.286	ENSPSIG00000009154	PCCA	100	84.365	Pelodiscus_sinensis
ENSSSCG00000009522	PCCA	100	88.356	ENSPEMG00000009083	Pcca	100	88.356	Peromyscus_maniculatus_bairdii
ENSSSCG00000009522	PCCA	100	85.796	ENSPCIG00000027261	PCCA	100	85.796	Phascolarctos_cinereus
ENSSSCG00000009522	PCCA	95	74.964	ENSPFOG00000014855	pcca	96	74.964	Poecilia_formosa
ENSSSCG00000009522	PCCA	95	74.964	ENSPLAG00000016583	pcca	96	74.964	Poecilia_latipinna
ENSSSCG00000009522	PCCA	95	74.820	ENSPMEG00000011613	pcca	96	74.820	Poecilia_mexicana
ENSSSCG00000009522	PCCA	91	75.397	ENSPREG00000007537	pcca	100	75.873	Poecilia_reticulata
ENSSSCG00000009522	PCCA	100	90.000	ENSPPYG00000005473	PCCA	100	90.000	Pongo_abelii
ENSSSCG00000009522	PCCA	100	89.458	ENSPCOG00000015321	PCCA	100	89.458	Propithecus_coquereli
ENSSSCG00000009522	PCCA	91	78.362	ENSPNYG00000008226	pcca	100	78.362	Pundamilia_nyererei
ENSSSCG00000009522	PCCA	92	78.815	ENSPNAG00000011078	pcca	95	78.815	Pygocentrus_nattereri
ENSSSCG00000009522	PCCA	100	90.630	ENSRROG00000030936	PCCA	100	90.630	Rhinopithecus_roxellana
ENSSSCG00000009522	PCCA	100	90.137	ENSSBOG00000020005	PCCA	100	90.137	Saimiri_boliviensis_boliviensis
ENSSSCG00000009522	PCCA	51	94.269	ENSSHAG00000014732	-	100	94.269	Sarcophilus_harrisii
ENSSSCG00000009522	PCCA	97	79.066	ENSSFOG00015021986	pcca	99	79.066	Scleropages_formosus
ENSSSCG00000009522	PCCA	91	76.508	ENSSMAG00000018126	pcca	100	76.625	Scophthalmus_maximus
ENSSSCG00000009522	PCCA	92	77.481	ENSSDUG00000021326	pcca	95	77.481	Seriola_dumerili
ENSSSCG00000009522	PCCA	96	75.286	ENSSLDG00000016568	pcca	98	77.849	Seriola_lalandi_dorsalis
ENSSSCG00000009522	PCCA	91	83.043	ENSSPUG00000006036	PCCA	96	83.175	Sphenodon_punctatus
ENSSSCG00000009522	PCCA	95	71.470	ENSSPAG00000022191	pcca	94	71.470	Stegastes_partitus
ENSSSCG00000009522	PCCA	95	82.370	ENSTGUG00000010915	PCCA	100	82.370	Taeniopygia_guttata
ENSSSCG00000009522	PCCA	96	73.973	ENSTRUG00000004990	pcca	99	73.860	Takifugu_rubripes
ENSSSCG00000009522	PCCA	100	89.754	ENSTTRG00000002569	PCCA	100	89.754	Tursiops_truncatus
ENSSSCG00000009522	PCCA	96	89.940	ENSUMAG00000023453	PCCA	100	94.272	Ursus_maritimus
ENSSSCG00000009522	PCCA	100	93.707	ENSVVUG00000013550	PCCA	100	95.404	Vulpes_vulpes
ENSSSCG00000009522	PCCA	91	76.032	ENSXCOG00000014159	pcca	100	76.480	Xiphophorus_couchianus
ENSSSCG00000009522	PCCA	95	75.108	ENSXMAG00000014869	pcca	98	74.571	Xiphophorus_maculatus