EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000009572 (Gene tree)
Gene ID: 100738776
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 125831 bases
Position: chr11:154516-280346
Accession: 100738776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000027213	TUDOR	PF00567.24	1.5e-85	1	5
ENSSSCP00000027213	TUDOR	PF00567.24	1.5e-85	2	5
ENSSSCP00000027213	TUDOR	PF00567.24	1.5e-85	3	5
ENSSSCP00000027213	TUDOR	PF00567.24	1.5e-85	4	5
ENSSSCP00000027213	TUDOR	PF00567.24	1.5e-85	5	5
ENSSSCP00000010221	TUDOR	PF00567.24	3.7e-84	1	5
ENSSSCP00000010221	TUDOR	PF00567.24	3.7e-84	2	5
ENSSSCP00000010221	TUDOR	PF00567.24	3.7e-84	3	5
ENSSSCP00000010221	TUDOR	PF00567.24	3.7e-84	4	5
ENSSSCP00000010221	TUDOR	PF00567.24	3.7e-84	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000030729	RNF17-202	4416	-	ENSSSCP00000027213	1471 (aa)	-	I3LSX0
ENSSSCT00000010493	RNF17-201	4854	XM_021065407	ENSSSCP00000010221	1617 (aa)	XP_020921066	F1RN25

Gene Model

Click here to download ENSSSCG00000009572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009572's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009572	RNF17	100	79.865	ENSG00000132972	RNF17	99	83.138	Homo_sapiens
ENSSSCG00000009572	RNF17	82	32.898	ENSAPOG00000017034	rnf17	89	32.827	Acanthochromis_polyacanthus
ENSSSCG00000009572	RNF17	100	83.396	ENSAMEG00000017340	RNF17	100	77.371	Ailuropoda_melanoleuca
ENSSSCG00000009572	RNF17	97	32.385	ENSAOCG00000018283	rnf17	98	32.547	Amphiprion_ocellaris
ENSSSCG00000009572	RNF17	82	34.537	ENSAPEG00000022338	rnf17	83	34.761	Amphiprion_percula
ENSSSCG00000009572	RNF17	80	35.333	ENSATEG00000002067	rnf17	79	35.665	Anabas_testudineus
ENSSSCG00000009572	RNF17	89	48.669	ENSAPLG00000003969	RNF17	99	48.669	Anas_platyrhynchos
ENSSSCG00000009572	RNF17	91	46.823	ENSACAG00000001418	RNF17	91	46.823	Anolis_carolinensis
ENSSSCG00000009572	RNF17	92	72.961	ENSANAG00000029969	RNF17	96	72.961	Aotus_nancymaae
ENSSSCG00000009572	RNF17	98	30.842	ENSACLG00000018279	rnf17	99	30.332	Astatotilapia_calliptera
ENSSSCG00000009572	RNF17	82	37.994	ENSAMXG00000011002	rnf17	79	37.135	Astyanax_mexicanus
ENSSSCG00000009572	RNF17	55	81.899	ENSBTAG00000000278	RNF17	100	81.899	Bos_taurus
ENSSSCG00000009572	RNF17	100	76.727	ENSCJAG00000018937	RNF17	100	76.444	Callithrix_jacchus
ENSSSCG00000009572	RNF17	98	82.565	ENSCAFG00000007418	RNF17	98	83.155	Canis_familiaris
ENSSSCG00000009572	RNF17	50	86.307	ENSCAFG00020002919	-	100	86.307	Canis_lupus_dingo
ENSSSCG00000009572	RNF17	100	83.408	ENSCHIG00000026716	RNF17	100	83.581	Capra_hircus
ENSSSCG00000009572	RNF17	97	76.519	ENSTSYG00000000365	RNF17	99	73.264	Carlito_syrichta
ENSSSCG00000009572	RNF17	82	64.221	ENSCAPG00000012908	RNF17	98	64.433	Cavia_aperea
ENSSSCG00000009572	RNF17	100	77.327	ENSCCAG00000026725	RNF17	99	76.889	Cebus_capucinus
ENSSSCG00000009572	RNF17	100	78.904	ENSCATG00000040352	RNF17	100	77.037	Cercocebus_atys
ENSSSCG00000009572	RNF17	98	78.320	ENSCLAG00000004127	RNF17	100	73.503	Chinchilla_lanigera
ENSSSCG00000009572	RNF17	100	78.904	ENSCSAG00000018019	RNF17	100	72.885	Chlorocebus_sabaeus
ENSSSCG00000009572	RNF17	88	82.203	ENSCHOG00000013310	RNF17	86	82.203	Choloepus_hoffmanni
ENSSSCG00000009572	RNF17	90	58.867	ENSCPBG00000020920	RNF17	95	58.015	Chrysemys_picta_bellii
ENSSSCG00000009572	RNF17	99	78.588	ENSCANG00000032927	RNF17	99	76.706	Colobus_angolensis_palliatus
ENSSSCG00000009572	RNF17	100	77.286	ENSCGRG00001022658	Rnf17	100	72.205	Cricetulus_griseus_chok1gshd
ENSSSCG00000009572	RNF17	100	77.286	ENSCGRG00000009924	Rnf17	100	72.205	Cricetulus_griseus_crigri
ENSSSCG00000009572	RNF17	82	31.142	ENSCSEG00000008626	rnf17	81	31.111	Cynoglossus_semilaevis
ENSSSCG00000009572	RNF17	73	36.111	ENSCVAG00000017008	rnf17	82	36.111	Cyprinodon_variegatus
ENSSSCG00000009572	RNF17	91	31.833	ENSDARG00000056387	rnf17	81	34.354	Danio_rerio
ENSSSCG00000009572	RNF17	99	81.798	ENSDNOG00000006115	RNF17	99	76.449	Dasypus_novemcinctus
ENSSSCG00000009572	RNF17	68	81.250	ENSETEG00000017874	-	64	81.250	Echinops_telfairi
ENSSSCG00000009572	RNF17	100	85.094	ENSECAG00000017152	RNF17	99	79.831	Equus_caballus
ENSSSCG00000009572	RNF17	82	65.348	ENSEEUG00000000332	RNF17	90	65.348	Erinaceus_europaeus
ENSSSCG00000009572	RNF17	83	36.292	ENSELUG00000005626	rnf17	76	36.292	Esox_lucius
ENSSSCG00000009572	RNF17	100	82.945	ENSFCAG00000004914	RNF17	100	80.267	Felis_catus
ENSSSCG00000009572	RNF17	86	50.119	ENSFALG00000008766	RNF17	91	51.278	Ficedula_albicollis
ENSSSCG00000009572	RNF17	100	76.369	ENSFDAG00000017857	RNF17	100	71.127	Fukomys_damarensis
ENSSSCG00000009572	RNF17	86	34.152	ENSFHEG00000014822	rnf17	74	34.603	Fundulus_heteroclitus
ENSSSCG00000009572	RNF17	50	36.232	ENSGMOG00000015560	-	97	36.232	Gadus_morhua
ENSSSCG00000009572	RNF17	81	31.224	ENSGAFG00000004463	rnf17	89	31.557	Gambusia_affinis
ENSSSCG00000009572	RNF17	56	35.385	ENSGACG00000001340	-	99	35.385	Gasterosteus_aculeatus
ENSSSCG00000009572	RNF17	93	55.547	ENSGAGG00000016999	RNF17	89	56.412	Gopherus_agassizii
ENSSSCG00000009572	RNF17	100	79.715	ENSGGOG00000014491	RNF17	98	80.631	Gorilla_gorilla
ENSSSCG00000009572	RNF17	98	30.728	ENSHBUG00000003554	rnf17	99	30.160	Haplochromis_burtoni
ENSSSCG00000009572	RNF17	99	77.586	ENSHGLG00000007270	RNF17	100	72.283	Heterocephalus_glaber_female
ENSSSCG00000009572	RNF17	99	77.511	ENSHGLG00100017393	RNF17	100	72.162	Heterocephalus_glaber_male
ENSSSCG00000009572	RNF17	70	41.304	ENSHCOG00000017676	rnf17	79	41.304	Hippocampus_comes
ENSSSCG00000009572	RNF17	86	33.634	ENSIPUG00000001087	rnf17	94	33.634	Ictalurus_punctatus
ENSSSCG00000009572	RNF17	100	76.987	ENSJJAG00000016584	Rnf17	100	72.447	Jaculus_jaculus
ENSSSCG00000009572	RNF17	82	34.653	ENSKMAG00000013403	rnf17	98	31.519	Kryptolebias_marmoratus
ENSSSCG00000009572	RNF17	83	32.289	ENSLBEG00000014910	rnf17	73	34.241	Labrus_bergylta
ENSSSCG00000009572	RNF17	87	51.195	ENSLACG00000000323	RNF17	99	47.079	Latimeria_chalumnae
ENSSSCG00000009572	RNF17	91	34.588	ENSLOCG00000010768	rnf17	89	31.089	Lepisosteus_oculatus
ENSSSCG00000009572	RNF17	100	79.129	ENSMFAG00000032388	RNF17	100	77.037	Macaca_fascicularis
ENSSSCG00000009572	RNF17	100	80.464	ENSMMUG00000014610	RNF17	98	80.269	Macaca_mulatta
ENSSSCG00000009572	RNF17	100	79.054	ENSMNEG00000011234	RNF17	98	80.194	Macaca_nemestrina
ENSSSCG00000009572	RNF17	100	78.604	ENSMLEG00000030227	RNF17	98	76.664	Mandrillus_leucophaeus
ENSSSCG00000009572	RNF17	82	34.130	ENSMAMG00000020403	rnf17	86	34.160	Mastacembelus_armatus
ENSSSCG00000009572	RNF17	98	30.902	ENSMZEG00005019166	rnf17	99	30.391	Maylandia_zebra
ENSSSCG00000009572	RNF17	85	51.381	ENSMGAG00000015138	RNF17	100	51.381	Meleagris_gallopavo
ENSSSCG00000009572	RNF17	99	73.838	ENSMAUG00000004788	Rnf17	99	69.389	Mesocricetus_auratus
ENSSSCG00000009572	RNF17	100	81.579	ENSMICG00000010364	RNF17	100	78.783	Microcebus_murinus
ENSSSCG00000009572	RNF17	65	78.007	ENSMOCG00000011818	-	100	78.366	Microtus_ochrogaster
ENSSSCG00000009572	RNF17	82	40.288	ENSMMOG00000019514	rnf17	82	40.288	Mola_mola
ENSSSCG00000009572	RNF17	99	70.412	ENSMODG00000007827	RNF17	98	66.181	Monodelphis_domestica
ENSSSCG00000009572	RNF17	78	38.235	ENSMALG00000016943	rnf17	76	35.351	Monopterus_albus
ENSSSCG00000009572	RNF17	100	76.687	MGP_CAROLIEiJ_G0019337	Rnf17	100	71.480	Mus_caroli
ENSSSCG00000009572	RNF17	100	76.162	ENSMUSG00000000365	Rnf17	100	71.239	Mus_musculus
ENSSSCG00000009572	RNF17	100	76.387	MGP_PahariEiJ_G0030355	Rnf17	100	71.662	Mus_pahari
ENSSSCG00000009572	RNF17	100	76.087	MGP_SPRETEiJ_G0020228	Rnf17	100	71.118	Mus_spretus
ENSSSCG00000009572	RNF17	100	82.569	ENSMPUG00000013305	RNF17	100	77.224	Mustela_putorius_furo
ENSSSCG00000009572	RNF17	100	82.044	ENSMLUG00000003903	RNF17	100	75.750	Myotis_lucifugus
ENSSSCG00000009572	RNF17	99	76.912	ENSNGAG00000013553	Rnf17	100	71.971	Nannospalax_galili
ENSSSCG00000009572	RNF17	82	36.158	ENSNBRG00000012006	rnf17	81	36.559	Neolamprologus_brichardi
ENSSSCG00000009572	RNF17	100	78.979	ENSNLEG00000013780	RNF17	98	80.120	Nomascus_leucogenys
ENSSSCG00000009572	RNF17	70	67.945	ENSMEUG00000003276	-	60	67.945	Notamacropus_eugenii
ENSSSCG00000009572	RNF17	88	69.036	ENSOPRG00000016743	-	86	68.983	Ochotona_princeps
ENSSSCG00000009572	RNF17	50	66.766	ENSODEG00000005443	-	100	67.313	Octodon_degus
ENSSSCG00000009572	RNF17	88	31.821	ENSONIG00000015746	rnf17	99	33.872	Oreochromis_niloticus
ENSSSCG00000009572	RNF17	100	79.910	ENSOCUG00000007384	RNF17	100	74.293	Oryctolagus_cuniculus
ENSSSCG00000009572	RNF17	88	32.320	ENSORLG00000012818	rnf17	98	32.320	Oryzias_latipes
ENSSSCG00000009572	RNF17	97	31.673	ENSORLG00020009879	-	98	31.689	Oryzias_latipes_hni
ENSSSCG00000009572	RNF17	97	31.660	ENSORLG00015013027	-	98	31.676	Oryzias_latipes_hsok
ENSSSCG00000009572	RNF17	74	33.243	ENSOMEG00000009891	rnf17	85	33.363	Oryzias_melastigma
ENSSSCG00000009572	RNF17	100	79.730	ENSOGAG00000014803	RNF17	100	73.321	Otolemur_garnettii
ENSSSCG00000009572	RNF17	98	83.632	ENSOARG00000014641	RNF17	99	79.138	Ovis_aries
ENSSSCG00000009572	RNF17	100	75.979	ENSPPAG00000028779	RNF17	98	80.556	Pan_paniscus
ENSSSCG00000009572	RNF17	100	82.870	ENSPPRG00000009230	RNF17	100	80.267	Panthera_pardus
ENSSSCG00000009572	RNF17	100	82.795	ENSPTIG00000001738	RNF17	100	80.267	Panthera_tigris_altaica
ENSSSCG00000009572	RNF17	100	79.639	ENSPTRG00000005713	RNF17	98	80.556	Pan_troglodytes
ENSSSCG00000009572	RNF17	100	79.429	ENSPANG00000007640	RNF17	98	80.344	Papio_anubis
ENSSSCG00000009572	RNF17	85	35.697	ENSPKIG00000001648	rnf17	90	36.184	Paramormyrops_kingsleyae
ENSSSCG00000009572	RNF17	82	61.425	ENSPSIG00000011245	RNF17	100	61.595	Pelodiscus_sinensis
ENSSSCG00000009572	RNF17	100	77.061	ENSPEMG00000008693	Rnf17	100	72.266	Peromyscus_maniculatus_bairdii
ENSSSCG00000009572	RNF17	79	67.364	ENSPCIG00000009190	-	95	67.647	Phascolarctos_cinereus
ENSSSCG00000009572	RNF17	86	32.645	ENSPFOG00000007124	rnf17	74	33.629	Poecilia_formosa
ENSSSCG00000009572	RNF17	88	31.691	ENSPLAG00000006198	rnf17	74	33.984	Poecilia_latipinna
ENSSSCG00000009572	RNF17	88	31.915	ENSPMEG00000022432	rnf17	90	31.544	Poecilia_mexicana
ENSSSCG00000009572	RNF17	82	42.754	ENSPREG00000001414	rnf17	82	42.754	Poecilia_reticulata
ENSSSCG00000009572	RNF17	100	79.189	ENSPPYG00000005215	RNF17	100	72.869	Pongo_abelii
ENSSSCG00000009572	RNF17	72	84.211	ENSPCAG00000002665	RNF17	76	84.211	Procavia_capensis
ENSSSCG00000009572	RNF17	81	68.145	ENSPCOG00000020211	RNF17	100	57.692	Propithecus_coquereli
ENSSSCG00000009572	RNF17	99	73.137	ENSPVAG00000013021	RNF17	100	67.055	Pteropus_vampyrus
ENSSSCG00000009572	RNF17	82	35.468	ENSPNAG00000027505	rnf17	85	35.697	Pygocentrus_nattereri
ENSSSCG00000009572	RNF17	100	76.237	ENSRNOG00000008059	Rnf17	100	71.420	Rattus_norvegicus
ENSSSCG00000009572	RNF17	100	77.021	ENSRBIG00000027010	RNF17	98	76.105	Rhinopithecus_bieti
ENSSSCG00000009572	RNF17	100	78.378	ENSRROG00000022801	RNF17	98	79.491	Rhinopithecus_roxellana
ENSSSCG00000009572	RNF17	99	77.477	ENSSBOG00000021661	RNF17	99	77.481	Saimiri_boliviensis_boliviensis
ENSSSCG00000009572	RNF17	99	69.167	ENSSHAG00000005609	RNF17	99	64.937	Sarcophilus_harrisii
ENSSSCG00000009572	RNF17	82	43.137	ENSSFOG00015023037	rnf17	89	43.137	Scleropages_formosus
ENSSSCG00000009572	RNF17	78	33.028	ENSSMAG00000007429	rnf17	75	33.625	Scophthalmus_maximus
ENSSSCG00000009572	RNF17	87	31.694	ENSSDUG00000013530	rnf17	92	31.716	Seriola_dumerili
ENSSSCG00000009572	RNF17	85	31.783	ENSSLDG00000019577	rnf17	92	31.712	Seriola_lalandi_dorsalis
ENSSSCG00000009572	RNF17	100	72.998	ENSSARG00000003016	RNF17	83	72.998	Sorex_araneus
ENSSSCG00000009572	RNF17	98	51.417	ENSSPUG00000008917	RNF17	95	55.141	Sphenodon_punctatus
ENSSSCG00000009572	RNF17	77	33.533	ENSSPAG00000001925	rnf17	97	30.785	Stegastes_partitus
ENSSSCG00000009572	RNF17	74	53.535	ENSTGUG00000011267	-	100	53.846	Taeniopygia_guttata
ENSSSCG00000009572	RNF17	85	34.241	ENSTRUG00000015498	rnf17	80	34.033	Takifugu_rubripes
ENSSSCG00000009572	RNF17	82	33.939	ENSTNIG00000015681	rnf17	100	33.939	Tetraodon_nigroviridis
ENSSSCG00000009572	RNF17	100	66.448	ENSTBEG00000000282	RNF17	92	66.043	Tupaia_belangeri
ENSSSCG00000009572	RNF17	99	76.272	ENSTTRG00000012698	RNF17	96	74.753	Tursiops_truncatus
ENSSSCG00000009572	RNF17	50	86.280	ENSUMAG00000013953	-	100	86.280	Ursus_maritimus
ENSSSCG00000009572	RNF17	83	84.507	ENSVPAG00000011388	RNF17	85	84.507	Vicugna_pacos
ENSSSCG00000009572	RNF17	100	83.095	ENSVVUG00000006226	RNF17	100	86.111	Vulpes_vulpes
ENSSSCG00000009572	RNF17	79	41.916	ENSXETG00000034020	RNF17	100	43.437	Xenopus_tropicalis
ENSSSCG00000009572	RNF17	82	30.327	ENSXCOG00000018295	rnf17	76	33.452	Xiphophorus_couchianus
ENSSSCG00000009572	RNF17	82	30.588	ENSXMAG00000014747	rnf17	77	33.779	Xiphophorus_maculatus