EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000009710 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 463 bases
Position: chr14:19898601-19899063
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000049721	Ribosomal_L7Ae	PF01248.26	8.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000010646	-	429	-	ENSSSCP00000049721	142 (aa)	-	A0A287B0N5

Gene Model

Click here to download ENSSSCG00000009710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000009710	-	59	36.047	ENSSSCG00000000058	SNU13	86	30.476
ENSSSCG00000009710	-	73	31.429	ENSSSCG00000036272	-	82	31.429
ENSSSCG00000009710	-	100	79.085	ENSSSCG00000039635	-	86	79.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009710	-	100	75.163	ENSG00000145912	NHP2	100	75.163	Homo_sapiens
ENSSSCG00000009710	-	100	56.209	ENSAPOG00000004742	nhp2	100	56.209	Acanthochromis_polyacanthus
ENSSSCG00000009710	-	100	78.431	ENSAMEG00000006471	NHP2	100	78.431	Ailuropoda_melanoleuca
ENSSSCG00000009710	-	85	62.879	ENSACIG00000007968	nhp2	100	57.862	Amphilophus_citrinellus
ENSSSCG00000009710	-	100	56.209	ENSAOCG00000016311	nhp2	100	56.209	Amphiprion_ocellaris
ENSSSCG00000009710	-	100	56.209	ENSAPEG00000008765	nhp2	100	56.209	Amphiprion_percula
ENSSSCG00000009710	-	67	74.737	ENSATEG00000009651	nhp2	100	60.000	Anabas_testudineus
ENSSSCG00000009710	-	75	80.374	ENSACAG00000006692	NHP2	97	64.430	Anolis_carolinensis
ENSSSCG00000009710	-	98	76.000	ENSANAG00000023290	NHP2	98	76.000	Aotus_nancymaae
ENSSSCG00000009710	-	73	75.000	ENSANAG00000031552	-	79	75.000	Aotus_nancymaae
ENSSSCG00000009710	-	67	72.632	ENSACLG00000001082	nhp2	100	57.143	Astatotilapia_calliptera
ENSSSCG00000009710	-	100	60.784	ENSAMXG00000005845	nhp2	100	60.784	Astyanax_mexicanus
ENSSSCG00000009710	-	100	78.431	ENSBTAG00000006374	NHP2	100	78.431	Bos_taurus
ENSSSCG00000009710	-	73	45.192	WBGene00012964	Y48A6B.3	64	45.192	Caenorhabditis_elegans
ENSSSCG00000009710	-	98	75.333	ENSCJAG00000023093	-	98	75.333	Callithrix_jacchus
ENSSSCG00000009710	-	98	76.000	ENSCJAG00000038564	-	98	76.000	Callithrix_jacchus
ENSSSCG00000009710	-	100	78.431	ENSCAFG00000000240	NHP2	100	78.431	Canis_familiaris
ENSSSCG00000009710	-	100	78.431	ENSCHIG00000015159	NHP2	100	78.431	Capra_hircus
ENSSSCG00000009710	-	98	64.029	ENSTSYG00000008150	NHP2	98	64.029	Carlito_syrichta
ENSSSCG00000009710	-	100	75.817	ENSCPOG00000033753	NHP2	100	75.817	Cavia_porcellus
ENSSSCG00000009710	-	98	61.333	ENSCCAG00000034664	-	98	61.333	Cebus_capucinus
ENSSSCG00000009710	-	98	66.000	ENSCCAG00000027964	-	98	66.000	Cebus_capucinus
ENSSSCG00000009710	-	98	76.000	ENSCCAG00000034815	NHP2	98	76.000	Cebus_capucinus
ENSSSCG00000009710	-	100	75.163	ENSCATG00000043608	NHP2	100	75.163	Cercocebus_atys
ENSSSCG00000009710	-	100	74.510	ENSCLAG00000016005	NHP2	100	74.510	Chinchilla_lanigera
ENSSSCG00000009710	-	100	75.163	ENSCSAG00000008690	NHP2	100	75.163	Chlorocebus_sabaeus
ENSSSCG00000009710	-	100	76.471	ENSCHOG00000013038	NHP2	100	76.471	Choloepus_hoffmanni
ENSSSCG00000009710	-	75	75.701	ENSCPBG00000022106	NHP2	96	63.194	Chrysemys_picta_bellii
ENSSSCG00000009710	-	73	58.654	ENSCSAVG00000008036	-	68	58.654	Ciona_savignyi
ENSSSCG00000009710	-	94	71.724	ENSCANG00000038441	-	92	76.154	Colobus_angolensis_palliatus
ENSSSCG00000009710	-	100	75.817	ENSCANG00000031562	NHP2	100	75.817	Colobus_angolensis_palliatus
ENSSSCG00000009710	-	100	69.935	ENSCGRG00001005326	Nhp2	100	69.935	Cricetulus_griseus_chok1gshd
ENSSSCG00000009710	-	100	69.935	ENSCGRG00000013680	Nhp2	100	69.935	Cricetulus_griseus_crigri
ENSSSCG00000009710	-	100	58.065	ENSCSEG00000006761	nhp2	100	58.065	Cynoglossus_semilaevis
ENSSSCG00000009710	-	100	56.863	ENSDARG00000069422	nhp2	100	56.863	Danio_rerio
ENSSSCG00000009710	-	100	75.817	ENSDNOG00000017150	NHP2	94	75.817	Dasypus_novemcinctus
ENSSSCG00000009710	-	100	75.163	ENSDORG00000003312	Nhp2	100	75.163	Dipodomys_ordii
ENSSSCG00000009710	-	75	45.794	FBgn0029148	NHP2	67	45.794	Drosophila_melanogaster
ENSSSCG00000009710	-	100	74.675	ENSETEG00000006774	NHP2	100	74.675	Echinops_telfairi
ENSSSCG00000009710	-	100	78.431	ENSEASG00005012569	NHP2	100	78.431	Equus_asinus_asinus
ENSSSCG00000009710	-	94	77.931	ENSECAG00000022963	NHP2	83	77.931	Equus_caballus
ENSSSCG00000009710	-	70	76.000	ENSELUG00000021981	nhp2	85	76.000	Esox_lucius
ENSSSCG00000009710	-	100	78.431	ENSFCAG00000015541	NHP2	100	78.431	Felis_catus
ENSSSCG00000009710	-	75	76.636	ENSFALG00000008774	NHP2	91	62.329	Ficedula_albicollis
ENSSSCG00000009710	-	100	71.895	ENSFDAG00000008131	NHP2	100	71.895	Fukomys_damarensis
ENSSSCG00000009710	-	100	57.692	ENSFHEG00000000431	nhp2	100	57.692	Fundulus_heteroclitus
ENSSSCG00000009710	-	86	65.414	ENSGMOG00000000278	nhp2	100	60.927	Gadus_morhua
ENSSSCG00000009710	-	68	78.351	ENSGALG00000033666	NHP2	58	78.351	Gallus_gallus
ENSSSCG00000009710	-	75	74.766	ENSGAFG00000009838	nhp2	100	58.974	Gambusia_affinis
ENSSSCG00000009710	-	86	63.158	ENSGACG00000020889	nhp2	100	57.516	Gasterosteus_aculeatus
ENSSSCG00000009710	-	62	63.000	ENSGAGG00000006901	NHP2	80	63.000	Gopherus_agassizii
ENSSSCG00000009710	-	100	63.399	ENSGGOG00000040409	-	100	63.399	Gorilla_gorilla
ENSSSCG00000009710	-	100	63.399	ENSGGOG00000027198	-	100	63.399	Gorilla_gorilla
ENSSSCG00000009710	-	67	72.632	ENSHBUG00000010207	nhp2	100	57.792	Haplochromis_burtoni
ENSSSCG00000009710	-	100	75.163	ENSHGLG00000013630	NHP2	100	75.163	Heterocephalus_glaber_female
ENSSSCG00000009710	-	100	72.028	ENSHGLG00000014450	-	100	72.028	Heterocephalus_glaber_female
ENSSSCG00000009710	-	100	75.163	ENSHGLG00100007298	NHP2	100	75.163	Heterocephalus_glaber_male
ENSSSCG00000009710	-	100	72.028	ENSHGLG00100005282	-	100	72.028	Heterocephalus_glaber_male
ENSSSCG00000009710	-	100	72.028	ENSHGLG00100003440	-	100	72.028	Heterocephalus_glaber_male
ENSSSCG00000009710	-	100	56.962	ENSHCOG00000019552	nhp2	100	56.962	Hippocampus_comes
ENSSSCG00000009710	-	100	62.745	ENSIPUG00000024197	NHP2	100	62.745	Ictalurus_punctatus
ENSSSCG00000009710	-	100	76.471	ENSSTOG00000003235	NHP2	100	76.471	Ictidomys_tridecemlineatus
ENSSSCG00000009710	-	100	73.203	ENSJJAG00000016469	Nhp2	100	73.856	Jaculus_jaculus
ENSSSCG00000009710	-	67	72.632	ENSLBEG00000002128	nhp2	100	57.419	Labrus_bergylta
ENSSSCG00000009710	-	100	64.286	ENSLACG00000017167	NHP2	99	64.286	Latimeria_chalumnae
ENSSSCG00000009710	-	75	77.570	ENSLOCG00000009630	nhp2	100	60.131	Lepisosteus_oculatus
ENSSSCG00000009710	-	100	77.124	ENSLAFG00000012828	NHP2	100	77.124	Loxodonta_africana
ENSSSCG00000009710	-	100	75.163	ENSMFAG00000032376	NHP2	100	75.163	Macaca_fascicularis
ENSSSCG00000009710	-	100	54.248	ENSMMUG00000046673	-	100	54.248	Macaca_mulatta
ENSSSCG00000009710	-	100	75.163	ENSMNEG00000038787	NHP2	100	75.163	Macaca_nemestrina
ENSSSCG00000009710	-	100	75.163	ENSMLEG00000028639	NHP2	100	75.163	Mandrillus_leucophaeus
ENSSSCG00000009710	-	67	75.789	ENSMAMG00000022425	nhp2	100	58.710	Mastacembelus_armatus
ENSSSCG00000009710	-	67	72.632	ENSMZEG00005027834	nhp2	100	57.143	Maylandia_zebra
ENSSSCG00000009710	-	70	75.000	ENSMGAG00000003917	NHP2	100	75.000	Meleagris_gallopavo
ENSSSCG00000009710	-	100	77.124	ENSMICG00000005379	NHP2	100	77.124	Microcebus_murinus
ENSSSCG00000009710	-	100	70.588	ENSMOCG00000022171	Nhp2	100	70.588	Microtus_ochrogaster
ENSSSCG00000009710	-	67	71.579	ENSMMOG00000016811	nhp2	100	58.333	Mola_mola
ENSSSCG00000009710	-	100	62.338	ENSMODG00000004231	NHP2	100	62.338	Monodelphis_domestica
ENSSSCG00000009710	-	100	58.710	ENSMALG00000009613	nhp2	100	58.710	Monopterus_albus
ENSSSCG00000009710	-	100	69.935	MGP_CAROLIEiJ_G0016312	Nhp2	100	69.935	Mus_caroli
ENSSSCG00000009710	-	100	69.281	ENSMUSG00000001056	Nhp2	100	69.281	Mus_musculus
ENSSSCG00000009710	-	100	69.281	MGP_PahariEiJ_G0017447	Nhp2	100	69.281	Mus_pahari
ENSSSCG00000009710	-	100	69.281	MGP_SPRETEiJ_G0017156	Nhp2	100	69.281	Mus_spretus
ENSSSCG00000009710	-	100	76.129	ENSMPUG00000000747	NHP2	100	76.129	Mustela_putorius_furo
ENSSSCG00000009710	-	100	73.856	ENSMLUG00000003377	NHP2	100	73.856	Myotis_lucifugus
ENSSSCG00000009710	-	100	74.510	ENSNGAG00000021818	Nhp2	100	74.510	Nannospalax_galili
ENSSSCG00000009710	-	67	75.789	ENSNBRG00000018016	nhp2	100	59.740	Neolamprologus_brichardi
ENSSSCG00000009710	-	100	63.522	ENSNLEG00000015765	NHP2	100	63.522	Nomascus_leucogenys
ENSSSCG00000009710	-	100	61.688	ENSMEUG00000003839	NHP2	100	61.688	Notamacropus_eugenii
ENSSSCG00000009710	-	100	58.170	ENSOPRG00000007907	NHP2	100	58.170	Ochotona_princeps
ENSSSCG00000009710	-	100	75.817	ENSODEG00000006948	NHP2	100	75.817	Octodon_degus
ENSSSCG00000009710	-	67	76.842	ENSONIG00000017865	nhp2	100	60.390	Oreochromis_niloticus
ENSSSCG00000009710	-	53	82.667	ENSOANG00000001204	-	100	82.667	Ornithorhynchus_anatinus
ENSSSCG00000009710	-	99	75.658	ENSOCUG00000016091	-	99	75.658	Oryctolagus_cuniculus
ENSSSCG00000009710	-	99	76.316	ENSOCUG00000016057	-	99	76.316	Oryctolagus_cuniculus
ENSSSCG00000009710	-	100	61.438	ENSORLG00000029195	nhp2	100	61.438	Oryzias_latipes
ENSSSCG00000009710	-	100	61.438	ENSORLG00020003277	nhp2	100	61.438	Oryzias_latipes_hni
ENSSSCG00000009710	-	100	61.438	ENSORLG00015007851	nhp2	100	61.438	Oryzias_latipes_hsok
ENSSSCG00000009710	-	100	60.784	ENSOMEG00000017381	nhp2	87	60.784	Oryzias_melastigma
ENSSSCG00000009710	-	100	72.903	ENSOGAG00000016108	NHP2	100	72.903	Otolemur_garnettii
ENSSSCG00000009710	-	100	77.465	ENSOARG00000006274	NHP2	100	77.465	Ovis_aries
ENSSSCG00000009710	-	100	64.052	ENSPPAG00000038834	-	100	64.052	Pan_paniscus
ENSSSCG00000009710	-	100	75.163	ENSPPAG00000028668	NHP2	100	75.163	Pan_paniscus
ENSSSCG00000009710	-	100	78.431	ENSPPRG00000022505	NHP2	100	78.431	Panthera_pardus
ENSSSCG00000009710	-	66	89.362	ENSPTIG00000021731	NHP2	81	89.216	Panthera_tigris_altaica
ENSSSCG00000009710	-	93	65.734	ENSPTRG00000050430	-	99	65.734	Pan_troglodytes
ENSSSCG00000009710	-	100	75.817	ENSPTRG00000048185	NHP2	100	75.817	Pan_troglodytes
ENSSSCG00000009710	-	93	65.734	ENSPTRG00000049011	-	99	65.734	Pan_troglodytes
ENSSSCG00000009710	-	100	75.163	ENSPANG00000019121	NHP2	100	75.163	Papio_anubis
ENSSSCG00000009710	-	89	67.153	ENSPKIG00000006410	nhp2	100	63.399	Paramormyrops_kingsleyae
ENSSSCG00000009710	-	92	59.859	ENSPMGG00000002916	nhp2	87	59.859	Periophthalmus_magnuspinnatus
ENSSSCG00000009710	-	100	68.627	ENSPEMG00000023567	Nhp2	100	68.627	Peromyscus_maniculatus_bairdii
ENSSSCG00000009710	-	92	58.333	ENSPMAG00000009888	nhp2	93	58.333	Petromyzon_marinus
ENSSSCG00000009710	-	78	72.973	ENSPCIG00000019848	-	93	72.973	Phascolarctos_cinereus
ENSSSCG00000009710	-	100	61.688	ENSPCIG00000002727	-	100	61.688	Phascolarctos_cinereus
ENSSSCG00000009710	-	100	57.051	ENSPFOG00000002315	nhp2	100	57.051	Poecilia_formosa
ENSSSCG00000009710	-	100	56.410	ENSPLAG00000019287	nhp2	100	56.410	Poecilia_latipinna
ENSSSCG00000009710	-	100	57.051	ENSPMEG00000024346	nhp2	100	57.051	Poecilia_mexicana
ENSSSCG00000009710	-	75	69.159	ENSPREG00000005005	nhp2	91	69.159	Poecilia_reticulata
ENSSSCG00000009710	-	100	75.163	ENSPPYG00000016105	NHP2	100	75.163	Pongo_abelii
ENSSSCG00000009710	-	100	77.124	ENSPCOG00000020708	NHP2	100	77.124	Propithecus_coquereli
ENSSSCG00000009710	-	100	73.856	ENSPVAG00000001647	NHP2	100	73.856	Pteropus_vampyrus
ENSSSCG00000009710	-	67	72.632	ENSPNYG00000022418	nhp2	100	57.792	Pundamilia_nyererei
ENSSSCG00000009710	-	100	60.131	ENSPNAG00000013779	nhp2	100	60.131	Pygocentrus_nattereri
ENSSSCG00000009710	-	100	70.423	ENSRNOG00000004247	Nhp2	100	70.423	Rattus_norvegicus
ENSSSCG00000009710	-	100	71.242	ENSRNOG00000049622	LOC103690013	100	71.242	Rattus_norvegicus
ENSSSCG00000009710	-	100	75.163	ENSRBIG00000018610	NHP2	100	75.163	Rhinopithecus_bieti
ENSSSCG00000009710	-	100	75.163	ENSRROG00000043373	NHP2	100	75.163	Rhinopithecus_roxellana
ENSSSCG00000009710	-	100	61.438	ENSRROG00000044295	-	100	61.438	Rhinopithecus_roxellana
ENSSSCG00000009710	-	73	45.614	YDL208W	-	73	45.614	Saccharomyces_cerevisiae
ENSSSCG00000009710	-	98	76.000	ENSSBOG00000027889	NHP2	98	76.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000009710	-	100	61.688	ENSSHAG00000015581	NHP2	100	61.688	Sarcophilus_harrisii
ENSSSCG00000009710	-	100	60.784	ENSSFOG00015017061	nhp2	100	60.784	Scleropages_formosus
ENSSSCG00000009710	-	87	62.687	ENSSMAG00000011251	nhp2	100	58.333	Scophthalmus_maximus
ENSSSCG00000009710	-	100	58.824	ENSSDUG00000023355	nhp2	100	58.824	Seriola_dumerili
ENSSSCG00000009710	-	86	68.421	ENSSPUG00000005173	NHP2	88	68.421	Sphenodon_punctatus
ENSSSCG00000009710	-	100	56.209	ENSSPAG00000011696	nhp2	100	56.209	Stegastes_partitus
ENSSSCG00000009710	-	51	69.863	ENSTGUG00000000368	NHP2	95	54.464	Taeniopygia_guttata
ENSSSCG00000009710	-	85	65.649	ENSTRUG00000008183	nhp2	82	65.649	Takifugu_rubripes
ENSSSCG00000009710	-	73	66.667	ENSTNIG00000004219	nhp2	95	55.128	Tetraodon_nigroviridis
ENSSSCG00000009710	-	100	78.431	ENSUAMG00000025154	NHP2	100	78.431	Ursus_americanus
ENSSSCG00000009710	-	99	74.834	ENSUMAG00000023916	NHP2	97	74.834	Ursus_maritimus
ENSSSCG00000009710	-	70	66.667	ENSVPAG00000010059	NHP2	100	66.667	Vicugna_pacos
ENSSSCG00000009710	-	100	66.667	ENSVVUG00000001030	NHP2	100	66.667	Vulpes_vulpes
ENSSSCG00000009710	-	75	79.245	ENSXETG00000006731	nhp2	71	79.245	Xenopus_tropicalis
ENSSSCG00000009710	-	75	74.766	ENSXMAG00000007031	nhp2	100	58.974	Xiphophorus_maculatus