EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000009834 (Gene tree)
Gene ID: 100153708
Gene Symbol: ATXN2
Alias: ATX2|SCA2|TNRC13
Full Name: ataxin 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 107723 bases
Position: chr14:32664091-32771813
Accession: 100153708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000023292	PAM2	PF07145.15	9.3e-06	1	1
ENSSSCP00000035054	PAM2	PF07145.15	1e-05	1	1
ENSSSCP00000010498	PAM2	PF07145.15	1e-05	1	1
ENSSSCP00000052268	PAM2	PF07145.15	1e-05	1	1
ENSSSCP00000056267	PAM2	PF07145.15	1.1e-05	1	1
ENSSSCP00000036290	PAM2	PF07145.15	1.1e-05	1	1
ENSSSCP00000031182	PAM2	PF07145.15	1.1e-05	1	1
ENSSSCP00000023292	LsmAD	PF06741.13	8.3e-16	1	1
ENSSSCP00000010498	LsmAD	PF06741.13	9.5e-16	1	1
ENSSSCP00000035054	LsmAD	PF06741.13	9.5e-16	1	1
ENSSSCP00000056267	LsmAD	PF06741.13	1e-15	1	1
ENSSSCP00000052268	LsmAD	PF06741.13	1e-15	1	1
ENSSSCP00000036290	LsmAD	PF06741.13	1.1e-15	1	1
ENSSSCP00000031182	LsmAD	PF06741.13	1.1e-15	1	1
ENSSSCP00000023292	SM-ATX	PF14438.6	2.6e-21	1	1
ENSSSCP00000010498	SM-ATX	PF14438.6	2.8e-21	1	1
ENSSSCP00000035054	SM-ATX	PF14438.6	2.9e-21	1	1
ENSSSCP00000052268	SM-ATX	PF14438.6	3e-21	1	1
ENSSSCP00000056267	SM-ATX	PF14438.6	3.1e-21	1	1
ENSSSCP00000036290	SM-ATX	PF14438.6	3.3e-21	1	1
ENSSSCP00000031182	SM-ATX	PF14438.6	3.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000041394	ATXN2-201	5346	XM_005670656	ENSSSCP00000031182	1269 (aa)	XP_005670713	A0A286ZI01
ENSSSCT00000031994	ATXN2-206	3991	XM_021072918	ENSSSCP00000023292	1053 (aa)	XP_020928577	I3LGU8
ENSSSCT00000010778	ATXN2-205	4220	XM_005670654	ENSSSCP00000010498	1140 (aa)	XP_005670711	F1RMZ0
ENSSSCT00000063654	ATXN2-202	5292	XM_021072925	ENSSSCP00000036290	1251 (aa)	XP_020928584	A0A286ZXE5
ENSSSCT00000041356	ATXN2-207	3534	-	ENSSSCP00000052268	1177 (aa)	-	A0A287B833
ENSSSCT00000052661	ATXN2-204	4072	XM_021072936	ENSSSCP00000056267	1203 (aa)	XP_020928595	A0A287BJD3
ENSSSCT00000038091	ATXN2-203	5378	XM_001929533	ENSSSCP00000035054	1139 (aa)	XP_001929568	A0A286ZTR7

Gene Model

Click here to download ENSSSCG00000009834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000009834	ATXN2	94	40.979	ENSSSCG00000021845	ATXN2L	95	41.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009834	ATXN2	99	95.115	ENSG00000204842	ATXN2	99	100.000	Homo_sapiens
ENSSSCG00000009834	ATXN2	94	58.246	ENSAPOG00000014663	atxn2	96	70.915	Acanthochromis_polyacanthus
ENSSSCG00000009834	ATXN2	94	97.295	ENSAMEG00000013747	ATXN2	100	97.295	Ailuropoda_melanoleuca
ENSSSCG00000009834	ATXN2	91	56.367	ENSACIG00000004928	atxn2	100	57.182	Amphilophus_citrinellus
ENSSSCG00000009834	ATXN2	93	58.520	ENSAOCG00000001107	atxn2	96	69.667	Amphiprion_ocellaris
ENSSSCG00000009834	ATXN2	94	58.102	ENSAPEG00000020250	atxn2	95	70.847	Amphiprion_percula
ENSSSCG00000009834	ATXN2	91	55.831	ENSATEG00000018587	atxn2	100	57.298	Anabas_testudineus
ENSSSCG00000009834	ATXN2	94	88.723	ENSAPLG00000008724	ATXN2	99	88.224	Anas_platyrhynchos
ENSSSCG00000009834	ATXN2	94	79.796	ENSACAG00000002419	ATXN2	99	80.669	Anolis_carolinensis
ENSSSCG00000009834	ATXN2	99	94.217	ENSANAG00000022522	ATXN2	100	94.688	Aotus_nancymaae
ENSSSCG00000009834	ATXN2	91	58.388	ENSACLG00000013359	atxn2	97	58.505	Astatotilapia_calliptera
ENSSSCG00000009834	ATXN2	89	69.592	ENSAMXG00000002342	atxn2	90	68.810	Astyanax_mexicanus
ENSSSCG00000009834	ATXN2	95	96.289	ENSBTAG00000022069	ATXN2	100	97.517	Bos_taurus
ENSSSCG00000009834	ATXN2	98	94.723	ENSCJAG00000011756	ATXN2	100	92.755	Callithrix_jacchus
ENSSSCG00000009834	ATXN2	99	94.400	ENSCAFG00000008606	ATXN2	95	92.444	Canis_familiaris
ENSSSCG00000009834	ATXN2	92	97.233	ENSCAFG00020017041	ATXN2	100	97.233	Canis_lupus_dingo
ENSSSCG00000009834	ATXN2	95	96.207	ENSCHIG00000012141	ATXN2	95	91.539	Capra_hircus
ENSSSCG00000009834	ATXN2	94	97.007	ENSTSYG00000002717	ATXN2	99	96.183	Carlito_syrichta
ENSSSCG00000009834	ATXN2	75	83.702	ENSCAPG00000013332	ATXN2	100	89.275	Cavia_aperea
ENSSSCG00000009834	ATXN2	99	92.832	ENSCPOG00000001390	ATXN2	100	94.504	Cavia_porcellus
ENSSSCG00000009834	ATXN2	99	94.840	ENSCCAG00000026267	ATXN2	99	96.183	Cebus_capucinus
ENSSSCG00000009834	ATXN2	99	93.872	ENSCATG00000017877	ATXN2	98	94.849	Cercocebus_atys
ENSSSCG00000009834	ATXN2	94	94.869	ENSCLAG00000009324	ATXN2	100	94.380	Chinchilla_lanigera
ENSSSCG00000009834	ATXN2	99	94.050	ENSCSAG00000002590	ATXN2	98	94.947	Chlorocebus_sabaeus
ENSSSCG00000009834	ATXN2	76	89.544	ENSCHOG00000004284	ATXN2	86	89.544	Choloepus_hoffmanni
ENSSSCG00000009834	ATXN2	91	86.004	ENSCPBG00000003465	ATXN2	100	86.217	Chrysemys_picta_bellii
ENSSSCG00000009834	ATXN2	94	96.539	ENSCANG00000042302	ATXN2	100	96.539	Colobus_angolensis_palliatus
ENSSSCG00000009834	ATXN2	94	90.926	ENSCGRG00001022603	Atxn2	90	86.667	Cricetulus_griseus_chok1gshd
ENSSSCG00000009834	ATXN2	94	93.389	ENSCGRG00000015823	Atxn2	100	92.895	Cricetulus_griseus_crigri
ENSSSCG00000009834	ATXN2	92	62.259	ENSCSEG00000009072	-	96	67.000	Cynoglossus_semilaevis
ENSSSCG00000009834	ATXN2	94	56.749	ENSCSEG00000018366	atxn2	96	68.814	Cynoglossus_semilaevis
ENSSSCG00000009834	ATXN2	91	67.164	ENSCVAG00000020160	atxn2	96	69.608	Cyprinodon_variegatus
ENSSSCG00000009834	ATXN2	94	70.513	ENSDARG00000052897	atxn2	96	61.066	Danio_rerio
ENSSSCG00000009834	ATXN2	100	94.148	ENSDNOG00000015696	ATXN2	100	93.873	Dasypus_novemcinctus
ENSSSCG00000009834	ATXN2	94	84.831	ENSDORG00000000808	Atxn2	99	85.070	Dipodomys_ordii
ENSSSCG00000009834	ATXN2	88	94.048	ENSETEG00000005224	ATXN2	77	94.048	Echinops_telfairi
ENSSSCG00000009834	ATXN2	99	94.885	ENSEASG00005012077	ATXN2	100	96.828	Equus_asinus_asinus
ENSSSCG00000009834	ATXN2	97	97.315	ENSECAG00000014347	ATXN2	94	93.719	Equus_caballus
ENSSSCG00000009834	ATXN2	72	96.066	ENSEEUG00000014635	-	71	96.066	Erinaceus_europaeus
ENSSSCG00000009834	ATXN2	94	57.923	ENSELUG00000019632	atxn2	96	57.934	Esox_lucius
ENSSSCG00000009834	ATXN2	100	96.319	ENSFCAG00000003178	ATXN2	100	96.319	Felis_catus
ENSSSCG00000009834	ATXN2	92	84.872	ENSFALG00000009001	ATXN2	100	84.776	Ficedula_albicollis
ENSSSCG00000009834	ATXN2	94	95.425	ENSFDAG00000020942	ATXN2	100	94.720	Fukomys_damarensis
ENSSSCG00000009834	ATXN2	85	67.353	ENSFHEG00000019561	atxn2	95	68.889	Fundulus_heteroclitus
ENSSSCG00000009834	ATXN2	86	62.395	ENSGMOG00000007412	atxn2	92	59.528	Gadus_morhua
ENSSSCG00000009834	ATXN2	94	83.613	ENSGALG00000004625	ATXN2	98	84.726	Gallus_gallus
ENSSSCG00000009834	ATXN2	89	67.761	ENSGAFG00000003302	atxn2	95	70.261	Gambusia_affinis
ENSSSCG00000009834	ATXN2	93	57.221	ENSGACG00000006295	atxn2	100	57.480	Gasterosteus_aculeatus
ENSSSCG00000009834	ATXN2	91	86.983	ENSGAGG00000005014	ATXN2	100	86.777	Gopherus_agassizii
ENSSSCG00000009834	ATXN2	99	90.569	ENSGGOG00000002137	ATXN2	100	96.667	Gorilla_gorilla
ENSSSCG00000009834	ATXN2	93	59.241	ENSHBUG00000002921	atxn2	96	71.242	Haplochromis_burtoni
ENSSSCG00000009834	ATXN2	94	93.446	ENSHGLG00000009812	ATXN2	95	86.946	Heterocephalus_glaber_female
ENSSSCG00000009834	ATXN2	94	95.794	ENSHGLG00100019351	ATXN2	100	95.254	Heterocephalus_glaber_male
ENSSSCG00000009834	ATXN2	90	66.082	ENSHCOG00000005278	atxn2	94	68.038	Hippocampus_comes
ENSSSCG00000009834	ATXN2	94	57.226	ENSIPUG00000016649	atxn2	95	58.061	Ictalurus_punctatus
ENSSSCG00000009834	ATXN2	94	96.732	ENSSTOG00000000978	ATXN2	100	96.336	Ictidomys_tridecemlineatus
ENSSSCG00000009834	ATXN2	94	59.366	ENSKMAG00000000980	atxn2	96	69.453	Kryptolebias_marmoratus
ENSSSCG00000009834	ATXN2	55	54.063	ENSLBEG00000017484	atxn2	97	51.638	Labrus_bergylta
ENSSSCG00000009834	ATXN2	94	74.609	ENSLACG00000012531	ATXN2	99	74.631	Latimeria_chalumnae
ENSSSCG00000009834	ATXN2	90	72.671	ENSLOCG00000007880	atxn2	96	73.312	Lepisosteus_oculatus
ENSSSCG00000009834	ATXN2	94	95.065	ENSLAFG00000007416	ATXN2	99	95.612	Loxodonta_africana
ENSSSCG00000009834	ATXN2	99	94.671	ENSMFAG00000000374	ATXN2	99	96.074	Macaca_fascicularis
ENSSSCG00000009834	ATXN2	99	91.393	ENSMMUG00000002226	ATXN2	100	96.571	Macaca_mulatta
ENSSSCG00000009834	ATXN2	99	94.671	ENSMNEG00000035588	ATXN2	100	94.501	Macaca_nemestrina
ENSSSCG00000009834	ATXN2	94	96.726	ENSMLEG00000024324	ATXN2	100	96.726	Mandrillus_leucophaeus
ENSSSCG00000009834	ATXN2	93	58.090	ENSMAMG00000019160	atxn2	95	70.261	Mastacembelus_armatus
ENSSSCG00000009834	ATXN2	93	59.241	ENSMZEG00005008476	atxn2	96	71.242	Maylandia_zebra
ENSSSCG00000009834	ATXN2	94	88.372	ENSMGAG00000005288	ATXN2	99	87.500	Meleagris_gallopavo
ENSSSCG00000009834	ATXN2	63	91.994	ENSMAUG00000008223	-	100	92.900	Mesocricetus_auratus
ENSSSCG00000009834	ATXN2	92	96.952	ENSMICG00000013541	ATXN2	100	96.952	Microcebus_murinus
ENSSSCG00000009834	ATXN2	78	92.385	ENSMOCG00000005219	Atxn2	100	92.457	Microtus_ochrogaster
ENSSSCG00000009834	ATXN2	91	71.479	ENSMMOG00000013189	atxn2	95	66.154	Mola_mola
ENSSSCG00000009834	ATXN2	95	88.241	ENSMODG00000012221	ATXN2	84	89.139	Monodelphis_domestica
ENSSSCG00000009834	ATXN2	93	58.708	ENSMALG00000018529	atxn2	96	71.242	Monopterus_albus
ENSSSCG00000009834	ATXN2	94	93.464	MGP_CAROLIEiJ_G0027692	Atxn2	100	90.734	Mus_caroli
ENSSSCG00000009834	ATXN2	94	92.904	ENSMUSG00000042605	Atxn2	100	92.473	Mus_musculus
ENSSSCG00000009834	ATXN2	100	81.119	MGP_PahariEiJ_G0024272	Atxn2	100	90.512	Mus_pahari
ENSSSCG00000009834	ATXN2	94	93.190	MGP_SPRETEiJ_G0028690	Atxn2	100	92.696	Mus_spretus
ENSSSCG00000009834	ATXN2	94	95.056	ENSMPUG00000002212	ATXN2	99	95.220	Mustela_putorius_furo
ENSSSCG00000009834	ATXN2	94	95.345	ENSMLUG00000015559	ATXN2	99	95.416	Myotis_lucifugus
ENSSSCG00000009834	ATXN2	91	60.728	ENSNBRG00000015794	atxn2	99	59.256	Neolamprologus_brichardi
ENSSSCG00000009834	ATXN2	99	95.196	ENSNLEG00000000484	ATXN2	99	96.510	Nomascus_leucogenys
ENSSSCG00000009834	ATXN2	79	97.727	ENSMEUG00000012244	-	85	97.727	Notamacropus_eugenii
ENSSSCG00000009834	ATXN2	93	89.603	ENSOPRG00000014599	ATXN2	100	89.698	Ochotona_princeps
ENSSSCG00000009834	ATXN2	92	94.577	ENSODEG00000010798	ATXN2	100	94.577	Octodon_degus
ENSSSCG00000009834	ATXN2	93	59.693	ENSONIG00000014521	atxn2	98	58.513	Oreochromis_niloticus
ENSSSCG00000009834	ATXN2	81	90.683	ENSOANG00000004796	ATXN2	100	90.683	Ornithorhynchus_anatinus
ENSSSCG00000009834	ATXN2	94	92.451	ENSOCUG00000002855	ATXN2	69	92.710	Oryctolagus_cuniculus
ENSSSCG00000009834	ATXN2	85	63.657	ENSORLG00000003606	atxn2	95	65.217	Oryzias_latipes
ENSSSCG00000009834	ATXN2	93	57.490	ENSORLG00020000785	atxn2	96	67.846	Oryzias_latipes_hni
ENSSSCG00000009834	ATXN2	93	57.436	ENSORLG00015012345	atxn2	96	67.846	Oryzias_latipes_hsok
ENSSSCG00000009834	ATXN2	93	57.895	ENSOMEG00000020080	atxn2	96	57.797	Oryzias_melastigma
ENSSSCG00000009834	ATXN2	100	96.053	ENSOGAG00000000609	ATXN2	95	92.146	Otolemur_garnettii
ENSSSCG00000009834	ATXN2	94	97.390	ENSOARG00000018223	ATXN2	100	97.390	Ovis_aries
ENSSSCG00000009834	ATXN2	94	96.922	ENSPPAG00000028043	ATXN2	100	96.857	Pan_paniscus
ENSSSCG00000009834	ATXN2	98	94.563	ENSPPRG00000003573	ATXN2	100	94.396	Panthera_pardus
ENSSSCG00000009834	ATXN2	94	96.913	ENSPTIG00000021122	ATXN2	100	96.762	Panthera_tigris_altaica
ENSSSCG00000009834	ATXN2	99	94.227	ENSPTRG00000029540	ATXN2	100	96.952	Pan_troglodytes
ENSSSCG00000009834	ATXN2	99	93.568	ENSPANG00000017168	ATXN2	99	96.183	Papio_anubis
ENSSSCG00000009834	ATXN2	90	68.634	ENSPKIG00000023134	atxn2	96	69.579	Paramormyrops_kingsleyae
ENSSSCG00000009834	ATXN2	94	87.232	ENSPSIG00000002353	-	99	87.009	Pelodiscus_sinensis
ENSSSCG00000009834	ATXN2	92	56.036	ENSPMGG00000005074	atxn2	100	55.415	Periophthalmus_magnuspinnatus
ENSSSCG00000009834	ATXN2	78	94.286	ENSPEMG00000015340	Atxn2	100	93.103	Peromyscus_maniculatus_bairdii
ENSSSCG00000009834	ATXN2	73	48.596	ENSPMAG00000004603	atxn2	93	51.930	Petromyzon_marinus
ENSSSCG00000009834	ATXN2	74	54.576	ENSPMAG00000007157	atxn2	87	54.576	Petromyzon_marinus
ENSSSCG00000009834	ATXN2	57	85.561	ENSPCIG00000006165	-	99	84.641	Phascolarctos_cinereus
ENSSSCG00000009834	ATXN2	86	65.051	ENSPFOG00000005857	atxn2	96	55.348	Poecilia_formosa
ENSSSCG00000009834	ATXN2	91	67.761	ENSPLAG00000015241	atxn2	96	70.508	Poecilia_latipinna
ENSSSCG00000009834	ATXN2	91	67.164	ENSPMEG00000016681	atxn2	96	70.508	Poecilia_mexicana
ENSSSCG00000009834	ATXN2	92	71.821	ENSPREG00000014825	atxn2	95	70.134	Poecilia_reticulata
ENSSSCG00000009834	ATXN2	99	94.760	ENSPPYG00000004963	ATXN2	92	94.420	Pongo_abelii
ENSSSCG00000009834	ATXN2	72	100.000	ENSPCAG00000004216	-	65	97.107	Procavia_capensis
ENSSSCG00000009834	ATXN2	100	93.772	ENSPCOG00000022031	ATXN2	99	96.183	Propithecus_coquereli
ENSSSCG00000009834	ATXN2	100	91.184	ENSPVAG00000013179	ATXN2	87	96.819	Pteropus_vampyrus
ENSSSCG00000009834	ATXN2	55	52.437	ENSPNYG00000016981	atxn2	96	52.773	Pundamilia_nyererei
ENSSSCG00000009834	ATXN2	94	60.794	ENSPNAG00000010889	atxn2	96	61.388	Pygocentrus_nattereri
ENSSSCG00000009834	ATXN2	94	93.010	ENSRNOG00000001256	Atxn2	98	93.071	Rattus_norvegicus
ENSSSCG00000009834	ATXN2	93	93.797	ENSRBIG00000039212	ATXN2	99	96.183	Rhinopithecus_bieti
ENSSSCG00000009834	ATXN2	94	96.726	ENSRROG00000031170	ATXN2	100	96.660	Rhinopithecus_roxellana
ENSSSCG00000009834	ATXN2	92	94.688	ENSSBOG00000031563	ATXN2	99	96.401	Saimiri_boliviensis_boliviensis
ENSSSCG00000009834	ATXN2	94	88.744	ENSSHAG00000007304	ATXN2	99	88.785	Sarcophilus_harrisii
ENSSSCG00000009834	ATXN2	92	61.054	ENSSFOG00015017229	atxn2	100	60.865	Scleropages_formosus
ENSSSCG00000009834	ATXN2	93	58.301	ENSSMAG00000004627	atxn2	96	70.418	Scophthalmus_maximus
ENSSSCG00000009834	ATXN2	94	58.278	ENSSDUG00000001223	atxn2	96	71.525	Seriola_dumerili
ENSSSCG00000009834	ATXN2	91	57.850	ENSSLDG00000019837	atxn2	100	57.817	Seriola_lalandi_dorsalis
ENSSSCG00000009834	ATXN2	90	90.984	ENSSARG00000006291	ATXN2	94	90.984	Sorex_araneus
ENSSSCG00000009834	ATXN2	93	87.042	ENSSPUG00000010317	ATXN2	98	82.447	Sphenodon_punctatus
ENSSSCG00000009834	ATXN2	90	70.696	ENSSPAG00000000377	atxn2	95	70.915	Stegastes_partitus
ENSSSCG00000009834	ATXN2	93	84.510	ENSTGUG00000006497	ATXN2	99	83.776	Taeniopygia_guttata
ENSSSCG00000009834	ATXN2	93	56.322	ENSTRUG00000016801	atxn2	96	67.628	Takifugu_rubripes
ENSSSCG00000009834	ATXN2	81	98.462	ENSTBEG00000001985	ATXN2	89	98.438	Tupaia_belangeri
ENSSSCG00000009834	ATXN2	91	99.507	ENSTTRG00000000952	ATXN2	87	99.413	Tursiops_truncatus
ENSSSCG00000009834	ATXN2	100	96.254	ENSUAMG00000025295	ATXN2	100	96.254	Ursus_americanus
ENSSSCG00000009834	ATXN2	92	97.424	ENSUMAG00000007315	ATXN2	100	97.424	Ursus_maritimus
ENSSSCG00000009834	ATXN2	88	97.656	ENSVPAG00000005940	ATXN2	94	98.333	Vicugna_pacos
ENSSSCG00000009834	ATXN2	92	97.143	ENSVVUG00000016107	ATXN2	100	97.143	Vulpes_vulpes
ENSSSCG00000009834	ATXN2	93	77.103	ENSXETG00000020912	atxn2	100	77.009	Xenopus_tropicalis
ENSSSCG00000009834	ATXN2	54	56.240	ENSXCOG00000010001	atxn2	98	56.856	Xiphophorus_couchianus
ENSSSCG00000009834	ATXN2	91	67.463	ENSXMAG00000003481	atxn2	96	69.831	Xiphophorus_maculatus