EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000009912 (Gene tree)
Gene ID: 100151786
Gene Symbol: POP5
Alias: -
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 2470 bases
Position: chr14:40523446-40525915
Accession: 100151786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000010577	RNase_P_Rpp14	PF01900.19	2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000010862	POP5-201	711	XM_001925378	ENSSSCP00000010577	170 (aa)	XP_001925413	F1RJI5

Gene Model

Click here to download ENSSSCG00000009912's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG
ssc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009912	POP5	87	94.595	ENSG00000167272	POP5	100	88.824	Homo_sapiens
ENSSSCG00000009912	POP5	88	53.691	ENSAPOG00000023686	POP5	100	51.190	Acanthochromis_polyacanthus
ENSSSCG00000009912	POP5	100	88.953	ENSAMEG00000008503	POP5	100	88.953	Ailuropoda_melanoleuca
ENSSSCG00000009912	POP5	87	54.054	ENSACIG00000018362	pop5	98	52.761	Amphilophus_citrinellus
ENSSSCG00000009912	POP5	88	52.667	ENSAOCG00000001930	pop5	98	50.920	Amphiprion_ocellaris
ENSSSCG00000009912	POP5	88	52.667	ENSAPEG00000006795	pop5	98	50.920	Amphiprion_percula
ENSSSCG00000009912	POP5	84	55.634	ENSATEG00000016792	pop5	99	50.299	Anabas_testudineus
ENSSSCG00000009912	POP5	52	74.157	ENSAPLG00000015761	POP5	96	70.192	Anas_platyrhynchos
ENSSSCG00000009912	POP5	94	60.625	ENSACAG00000003091	POP5	96	60.625	Anolis_carolinensis
ENSSSCG00000009912	POP5	87	93.243	ENSANAG00000023744	POP5	100	87.059	Aotus_nancymaae
ENSSSCG00000009912	POP5	89	54.967	ENSACLG00000021131	-	99	52.695	Astatotilapia_calliptera
ENSSSCG00000009912	POP5	88	54.305	ENSAMXG00000038175	pop5	92	51.553	Astyanax_mexicanus
ENSSSCG00000009912	POP5	100	93.529	ENSBTAG00000005385	POP5	100	93.529	Bos_taurus
ENSSSCG00000009912	POP5	87	93.919	ENSCJAG00000001309	POP5	100	87.647	Callithrix_jacchus
ENSSSCG00000009912	POP5	100	91.176	ENSCAFG00000010389	POP5	100	91.176	Canis_familiaris
ENSSSCG00000009912	POP5	100	91.176	ENSCAFG00020020663	POP5	100	91.176	Canis_lupus_dingo
ENSSSCG00000009912	POP5	100	94.706	ENSCHIG00000016402	POP5	100	94.706	Capra_hircus
ENSSSCG00000009912	POP5	100	92.941	ENSTSYG00000027616	POP5	100	92.941	Carlito_syrichta
ENSSSCG00000009912	POP5	68	93.043	ENSCAPG00000016873	POP5	100	93.043	Cavia_aperea
ENSSSCG00000009912	POP5	100	91.176	ENSCPOG00000012337	POP5	100	91.176	Cavia_porcellus
ENSSSCG00000009912	POP5	87	93.243	ENSCCAG00000023154	POP5	100	87.647	Cebus_capucinus
ENSSSCG00000009912	POP5	87	94.595	ENSCATG00000036825	POP5	100	88.235	Cercocebus_atys
ENSSSCG00000009912	POP5	100	92.941	ENSCLAG00000007808	POP5	100	92.941	Chinchilla_lanigera
ENSSSCG00000009912	POP5	87	94.595	ENSCSAG00000002246	POP5	100	88.235	Chlorocebus_sabaeus
ENSSSCG00000009912	POP5	85	75.862	ENSCHOG00000013969	POP5	100	74.706	Choloepus_hoffmanni
ENSSSCG00000009912	POP5	99	68.824	ENSCPBG00000011331	POP5	99	68.824	Chrysemys_picta_bellii
ENSSSCG00000009912	POP5	87	93.919	ENSCANG00000028001	POP5	100	87.647	Colobus_angolensis_palliatus
ENSSSCG00000009912	POP5	100	89.412	ENSCGRG00001017974	Pop5	100	89.412	Cricetulus_griseus_chok1gshd
ENSSSCG00000009912	POP5	100	89.412	ENSCGRG00000010102	Pop5	100	89.412	Cricetulus_griseus_crigri
ENSSSCG00000009912	POP5	81	56.204	ENSCSEG00000011103	pop5	91	56.618	Cynoglossus_semilaevis
ENSSSCG00000009912	POP5	89	52.632	ENSCSEG00000008332	-	100	50.595	Cynoglossus_semilaevis
ENSSSCG00000009912	POP5	91	37.419	ENSCVAG00000009152	-	92	37.419	Cyprinodon_variegatus
ENSSSCG00000009912	POP5	88	53.642	ENSDARG00000053452	pop5	99	51.765	Danio_rerio
ENSSSCG00000009912	POP5	100	89.535	ENSDNOG00000012668	-	90	89.535	Dasypus_novemcinctus
ENSSSCG00000009912	POP5	100	91.176	ENSDNOG00000045952	-	100	91.176	Dasypus_novemcinctus
ENSSSCG00000009912	POP5	100	88.235	ENSDORG00000029401	Pop5	100	91.765	Dipodomys_ordii
ENSSSCG00000009912	POP5	84	31.690	FBgn0036696	CG14057	95	31.690	Drosophila_melanogaster
ENSSSCG00000009912	POP5	98	84.337	ENSETEG00000009283	POP5	98	84.337	Echinops_telfairi
ENSSSCG00000009912	POP5	86	40.816	ENSEBUG00000016369	pop5	90	40.816	Eptatretus_burgeri
ENSSSCG00000009912	POP5	100	92.941	ENSEASG00005004714	POP5	100	92.941	Equus_asinus_asinus
ENSSSCG00000009912	POP5	100	94.118	ENSECAG00000010012	POP5	100	94.118	Equus_caballus
ENSSSCG00000009912	POP5	94	55.346	ENSELUG00000023394	pop5	98	55.346	Esox_lucius
ENSSSCG00000009912	POP5	100	90.000	ENSFCAG00000042614	POP5	100	90.000	Felis_catus
ENSSSCG00000009912	POP5	89	71.053	ENSFALG00000007537	POP5	99	68.072	Ficedula_albicollis
ENSSSCG00000009912	POP5	99	86.391	ENSFDAG00000009972	POP5	99	89.941	Fukomys_damarensis
ENSSSCG00000009912	POP5	96	52.096	ENSFHEG00000022341	pop5	100	52.096	Fundulus_heteroclitus
ENSSSCG00000009912	POP5	76	58.915	ENSGMOG00000001073	pop5	98	58.915	Gadus_morhua
ENSSSCG00000009912	POP5	86	61.644	ENSGALG00000007124	POP5	56	60.127	Gallus_gallus
ENSSSCG00000009912	POP5	84	59.155	ENSGAFG00000005937	-	93	56.287	Gambusia_affinis
ENSSSCG00000009912	POP5	96	51.534	ENSGACG00000012710	-	100	51.534	Gasterosteus_aculeatus
ENSSSCG00000009912	POP5	99	68.824	ENSGAGG00000016005	POP5	99	68.824	Gopherus_agassizii
ENSSSCG00000009912	POP5	87	94.595	ENSGGOG00000013505	POP5	100	88.824	Gorilla_gorilla
ENSSSCG00000009912	POP5	89	54.967	ENSHBUG00000011718	-	99	52.695	Haplochromis_burtoni
ENSSSCG00000009912	POP5	100	90.000	ENSHGLG00000011786	POP5	100	90.000	Heterocephalus_glaber_female
ENSSSCG00000009912	POP5	100	90.000	ENSHGLG00100014284	POP5	100	90.000	Heterocephalus_glaber_male
ENSSSCG00000009912	POP5	88	50.336	ENSHCOG00000011809	pop5	99	49.080	Hippocampus_comes
ENSSSCG00000009912	POP5	88	51.333	ENSIPUG00000003437	pop5	100	49.405	Ictalurus_punctatus
ENSSSCG00000009912	POP5	100	91.765	ENSSTOG00000012577	POP5	100	91.765	Ictidomys_tridecemlineatus
ENSSSCG00000009912	POP5	100	85.294	ENSJJAG00000001080	Pop5	99	88.166	Jaculus_jaculus
ENSSSCG00000009912	POP5	86	52.381	ENSKMAG00000011158	-	99	49.412	Kryptolebias_marmoratus
ENSSSCG00000009912	POP5	92	50.000	ENSLBEG00000008652	pop5	92	50.000	Labrus_bergylta
ENSSSCG00000009912	POP5	92	63.924	ENSLACG00000018188	POP5	98	63.924	Latimeria_chalumnae
ENSSSCG00000009912	POP5	88	53.691	ENSLOCG00000002924	pop5	99	51.205	Lepisosteus_oculatus
ENSSSCG00000009912	POP5	100	88.372	ENSLAFG00000014545	POP5	100	88.372	Loxodonta_africana
ENSSSCG00000009912	POP5	87	94.595	ENSMFAG00000045933	POP5	99	92.258	Macaca_fascicularis
ENSSSCG00000009912	POP5	87	94.595	ENSMMUG00000040120	POP5	100	88.824	Macaca_mulatta
ENSSSCG00000009912	POP5	87	94.595	ENSMNEG00000041716	POP5	100	88.824	Macaca_nemestrina
ENSSSCG00000009912	POP5	87	93.919	ENSMLEG00000029377	POP5	100	88.235	Mandrillus_leucophaeus
ENSSSCG00000009912	POP5	84	55.634	ENSMAMG00000002108	pop5	98	51.534	Mastacembelus_armatus
ENSSSCG00000009912	POP5	89	54.967	ENSMZEG00005000069	-	99	52.695	Maylandia_zebra
ENSSSCG00000009912	POP5	100	88.824	ENSMAUG00000019670	Pop5	100	88.824	Mesocricetus_auratus
ENSSSCG00000009912	POP5	100	93.529	ENSMICG00000008692	POP5	100	93.529	Microcebus_murinus
ENSSSCG00000009912	POP5	100	80.000	ENSMOCG00000013322	Pop5	100	80.000	Microtus_ochrogaster
ENSSSCG00000009912	POP5	85	54.483	ENSMMOG00000010471	pop5	97	52.500	Mola_mola
ENSSSCG00000009912	POP5	100	75.882	ENSMODG00000003066	POP5	68	75.882	Monodelphis_domestica
ENSSSCG00000009912	POP5	84	57.042	ENSMALG00000017797	-	99	52.695	Monopterus_albus
ENSSSCG00000009912	POP5	100	88.235	MGP_CAROLIEiJ_G0027618	Pop5	100	88.235	Mus_caroli
ENSSSCG00000009912	POP5	100	88.235	ENSMUSG00000060152	Pop5	100	88.235	Mus_musculus
ENSSSCG00000009912	POP5	100	85.882	MGP_PahariEiJ_G0024198	Pop5	100	85.882	Mus_pahari
ENSSSCG00000009912	POP5	100	87.059	MGP_SPRETEiJ_G0028616	Pop5	100	87.059	Mus_spretus
ENSSSCG00000009912	POP5	88	92.667	ENSMPUG00000003221	POP5	100	88.824	Mustela_putorius_furo
ENSSSCG00000009912	POP5	98	90.476	ENSMLUG00000014657	POP5	99	90.476	Myotis_lucifugus
ENSSSCG00000009912	POP5	100	88.824	ENSNGAG00000002594	Pop5	99	89.349	Nannospalax_galili
ENSSSCG00000009912	POP5	66	55.357	ENSNBRG00000001020	-	83	55.357	Neolamprologus_brichardi
ENSSSCG00000009912	POP5	87	93.919	ENSNLEG00000015839	POP5	100	88.235	Nomascus_leucogenys
ENSSSCG00000009912	POP5	98	76.048	ENSMEUG00000015288	POP5	96	78.205	Notamacropus_eugenii
ENSSSCG00000009912	POP5	86	94.521	ENSOPRG00000004327	POP5	99	91.765	Ochotona_princeps
ENSSSCG00000009912	POP5	99	77.515	ENSODEG00000010351	-	100	77.515	Octodon_degus
ENSSSCG00000009912	POP5	100	90.588	ENSODEG00000006549	-	100	91.176	Octodon_degus
ENSSSCG00000009912	POP5	89	54.967	ENSONIG00000011172	pop5	99	53.293	Oreochromis_niloticus
ENSSSCG00000009912	POP5	68	73.913	ENSOANG00000001792	-	100	73.913	Ornithorhynchus_anatinus
ENSSSCG00000009912	POP5	99	91.124	ENSOCUG00000006537	POP5	99	91.124	Oryctolagus_cuniculus
ENSSSCG00000009912	POP5	100	48.235	ENSORLG00000014745	pop5	100	48.235	Oryzias_latipes
ENSSSCG00000009912	POP5	98	49.102	ENSORLG00020001168	pop5	98	49.102	Oryzias_latipes_hni
ENSSSCG00000009912	POP5	98	49.701	ENSORLG00015013535	pop5	98	49.701	Oryzias_latipes_hsok
ENSSSCG00000009912	POP5	94	52.174	ENSOMEG00000017643	pop5	96	52.174	Oryzias_melastigma
ENSSSCG00000009912	POP5	89	91.447	ENSOGAG00000008528	POP5	93	91.447	Otolemur_garnettii
ENSSSCG00000009912	POP5	100	93.605	ENSOARG00000012764	POP5	100	93.605	Ovis_aries
ENSSSCG00000009912	POP5	87	94.595	ENSPPAG00000043719	POP5	100	88.824	Pan_paniscus
ENSSSCG00000009912	POP5	100	90.000	ENSPPRG00000006474	POP5	100	90.000	Panthera_pardus
ENSSSCG00000009912	POP5	100	90.000	ENSPTIG00000012194	POP5	100	90.000	Panthera_tigris_altaica
ENSSSCG00000009912	POP5	87	94.595	ENSPTRG00000005543	POP5	100	88.824	Pan_troglodytes
ENSSSCG00000009912	POP5	87	94.595	ENSPANG00000014166	POP5	100	88.824	Papio_anubis
ENSSSCG00000009912	POP5	88	57.047	ENSPKIG00000025154	pop5	98	54.268	Paramormyrops_kingsleyae
ENSSSCG00000009912	POP5	65	72.973	ENSPSIG00000013154	POP5	86	72.973	Pelodiscus_sinensis
ENSSSCG00000009912	POP5	100	48.824	ENSPMGG00000000812	-	97	48.824	Periophthalmus_magnuspinnatus
ENSSSCG00000009912	POP5	100	86.471	ENSPEMG00000017493	Pop5	100	86.471	Peromyscus_maniculatus_bairdii
ENSSSCG00000009912	POP5	87	56.667	ENSPFOG00000013000	pop5	99	52.695	Poecilia_formosa
ENSSSCG00000009912	POP5	87	56.081	ENSPLAG00000014070	pop5	99	52.410	Poecilia_latipinna
ENSSSCG00000009912	POP5	86	56.463	ENSPMEG00000012863	POP5	99	53.614	Poecilia_mexicana
ENSSSCG00000009912	POP5	86	56.463	ENSPMEG00000024039	pop5	99	53.614	Poecilia_mexicana
ENSSSCG00000009912	POP5	84	57.746	ENSPREG00000020151	pop5	85	57.746	Poecilia_reticulata
ENSSSCG00000009912	POP5	87	93.919	ENSPPYG00000005036	POP5	84	88.235	Pongo_abelii
ENSSSCG00000009912	POP5	61	90.385	ENSPCAG00000004788	POP5	100	90.385	Procavia_capensis
ENSSSCG00000009912	POP5	100	92.941	ENSPCOG00000017618	POP5	100	92.941	Propithecus_coquereli
ENSSSCG00000009912	POP5	100	92.941	ENSPVAG00000002233	POP5	100	92.941	Pteropus_vampyrus
ENSSSCG00000009912	POP5	89	54.967	ENSPNYG00000002679	pop5	99	52.695	Pundamilia_nyererei
ENSSSCG00000009912	POP5	84	51.748	ENSPNAG00000012662	pop5	97	46.821	Pygocentrus_nattereri
ENSSSCG00000009912	POP5	94	88.125	ENSRNOG00000001199	Pop5	100	87.647	Rattus_norvegicus
ENSSSCG00000009912	POP5	86	93.151	ENSRBIG00000043505	POP5	96	93.377	Rhinopithecus_bieti
ENSSSCG00000009912	POP5	87	93.243	ENSRROG00000045063	POP5	96	93.377	Rhinopithecus_roxellana
ENSSSCG00000009912	POP5	87	93.919	ENSSBOG00000032691	POP5	100	91.176	Saimiri_boliviensis_boliviensis
ENSSSCG00000009912	POP5	88	55.034	ENSSFOG00015005630	pop5	100	53.846	Scleropages_formosus
ENSSSCG00000009912	POP5	84	54.167	ENSSMAG00000018868	pop5	85	54.167	Scophthalmus_maximus
ENSSSCG00000009912	POP5	98	51.497	ENSSDUG00000001282	-	99	51.497	Seriola_dumerili
ENSSSCG00000009912	POP5	98	52.096	ENSSLDG00000003801	-	99	52.096	Seriola_lalandi_dorsalis
ENSSSCG00000009912	POP5	98	52.096	ENSSLDG00000017031	pop5	99	52.096	Seriola_lalandi_dorsalis
ENSSSCG00000009912	POP5	61	92.308	ENSSARG00000005564	POP5	64	92.308	Sorex_araneus
ENSSSCG00000009912	POP5	88	72.483	ENSSPUG00000015531	POP5	100	67.857	Sphenodon_punctatus
ENSSSCG00000009912	POP5	84	59.155	ENSSPAG00000015306	pop5	98	55.828	Stegastes_partitus
ENSSSCG00000009912	POP5	96	69.512	ENSTGUG00000009602	POP5	100	69.512	Taeniopygia_guttata
ENSSSCG00000009912	POP5	98	53.293	ENSTRUG00000016214	pop5	98	53.293	Takifugu_rubripes
ENSSSCG00000009912	POP5	99	51.479	ENSTNIG00000011465	pop5	99	51.479	Tetraodon_nigroviridis
ENSSSCG00000009912	POP5	100	90.588	ENSTBEG00000010131	POP5	100	90.588	Tupaia_belangeri
ENSSSCG00000009912	POP5	100	95.294	ENSTTRG00000000153	POP5	100	95.294	Tursiops_truncatus
ENSSSCG00000009912	POP5	96	89.024	ENSUAMG00000015541	POP5	76	89.024	Ursus_americanus
ENSSSCG00000009912	POP5	100	89.412	ENSUMAG00000006137	POP5	100	89.412	Ursus_maritimus
ENSSSCG00000009912	POP5	100	92.941	ENSVPAG00000010365	POP5	100	92.941	Vicugna_pacos
ENSSSCG00000009912	POP5	100	91.176	ENSVVUG00000021154	POP5	100	91.176	Vulpes_vulpes
ENSSSCG00000009912	POP5	58	66.667	ENSXETG00000031793	POP5	86	66.667	Xenopus_tropicalis
ENSSSCG00000009912	POP5	84	58.451	ENSXMAG00000003508	-	85	54.601	Xiphophorus_maculatus