EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSSSCG00000009962 (Gene tree)
Gene ID: 768099
Gene Symbol: TFIP11
Alias: DKFZP434B194|Spp382|TIP39
Full Name: tuftelin interacting protein 11
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 25915 bases
Position: chr14:44092218-44118132
Accession: 768099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000010632	G-patch	PF01585.23	3.6e-16	1	1
ENSSSCP00000051355	G-patch	PF01585.23	3.6e-16	1	1
ENSSSCP00000059607	G-patch	PF01585.23	3.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000039603	TFIP11-202	3556	XM_021072206	ENSSSCP00000051355	836 (aa)	XP_020927865	Q06AK6
ENSSSCT00000010917	TFIP11-203	2711	-	ENSSSCP00000010632	836 (aa)	-	Q06AK6
ENSSSCT00000041829	TFIP11-201	7621	XM_021072205	ENSSSCP00000059607	836 (aa)	XP_020927864	Q06AK6

Gene Model

Click here to download ENSSSCG00000009962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009962's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009962	TFIP11	100	97.611	ENSG00000100109	TFIP11	100	97.611	Homo_sapiens
ENSSSCG00000009962	TFIP11	100	66.235	ENSAPOG00000011350	tfip11	100	66.784	Acanthochromis_polyacanthus
ENSSSCG00000009962	TFIP11	100	97.133	ENSAMEG00000018077	TFIP11	100	97.133	Ailuropoda_melanoleuca
ENSSSCG00000009962	TFIP11	100	66.231	ENSACIG00000020016	tfip11	100	66.667	Amphilophus_citrinellus
ENSSSCG00000009962	TFIP11	100	67.062	ENSAOCG00000014412	tfip11	100	66.549	Amphiprion_ocellaris
ENSSSCG00000009962	TFIP11	100	67.062	ENSAPEG00000021837	tfip11	100	66.549	Amphiprion_percula
ENSSSCG00000009962	TFIP11	100	66.469	ENSATEG00000006472	tfip11	100	66.469	Anabas_testudineus
ENSSSCG00000009962	TFIP11	89	90.823	ENSAPLG00000012229	TFIP11	99	90.823	Anas_platyrhynchos
ENSSSCG00000009962	TFIP11	100	97.372	ENSANAG00000036330	TFIP11	100	97.372	Aotus_nancymaae
ENSSSCG00000009962	TFIP11	100	67.378	ENSACLG00000001959	tfip11	100	66.981	Astatotilapia_calliptera
ENSSSCG00000009962	TFIP11	100	66.235	ENSAMXG00000018840	tfip11	99	66.235	Astyanax_mexicanus
ENSSSCG00000009962	TFIP11	100	94.624	ENSBTAG00000012288	TFIP11	100	94.624	Bos_taurus
ENSSSCG00000009962	TFIP11	98	31.693	WBGene00007412	stip-1	99	31.465	Caenorhabditis_elegans
ENSSSCG00000009962	TFIP11	100	97.372	ENSCJAG00000008628	TFIP11	100	97.372	Callithrix_jacchus
ENSSSCG00000009962	TFIP11	100	97.372	ENSCAFG00000011741	TFIP11	100	97.372	Canis_familiaris
ENSSSCG00000009962	TFIP11	100	97.372	ENSCAFG00020022398	TFIP11	100	97.372	Canis_lupus_dingo
ENSSSCG00000009962	TFIP11	100	94.385	ENSCHIG00000017173	TFIP11	100	94.504	Capra_hircus
ENSSSCG00000009962	TFIP11	100	97.611	ENSTSYG00000011768	TFIP11	100	97.611	Carlito_syrichta
ENSSSCG00000009962	TFIP11	100	91.637	ENSCAPG00000014283	TFIP11	100	91.637	Cavia_aperea
ENSSSCG00000009962	TFIP11	100	96.535	ENSCPOG00000000358	TFIP11	100	96.535	Cavia_porcellus
ENSSSCG00000009962	TFIP11	100	97.252	ENSCCAG00000022675	TFIP11	100	97.252	Cebus_capucinus
ENSSSCG00000009962	TFIP11	100	97.491	ENSCATG00000040954	TFIP11	100	97.491	Cercocebus_atys
ENSSSCG00000009962	TFIP11	100	96.774	ENSCLAG00000007269	TFIP11	100	96.774	Chinchilla_lanigera
ENSSSCG00000009962	TFIP11	100	97.491	ENSCSAG00000010084	TFIP11	100	97.491	Chlorocebus_sabaeus
ENSSSCG00000009962	TFIP11	89	98.598	ENSCHOG00000008730	TFIP11	89	98.598	Choloepus_hoffmanni
ENSSSCG00000009962	TFIP11	100	88.876	ENSCPBG00000021598	TFIP11	100	88.876	Chrysemys_picta_bellii
ENSSSCG00000009962	TFIP11	98	42.673	ENSCING00000008698	stip	99	42.312	Ciona_intestinalis
ENSSSCG00000009962	TFIP11	98	40.887	ENSCSAVG00000002061	-	99	40.986	Ciona_savignyi
ENSSSCG00000009962	TFIP11	100	97.491	ENSCANG00000002400	TFIP11	100	97.491	Colobus_angolensis_palliatus
ENSSSCG00000009962	TFIP11	100	92.354	ENSCGRG00001013439	Tfip11	100	92.354	Cricetulus_griseus_chok1gshd
ENSSSCG00000009962	TFIP11	100	92.354	ENSCGRG00000000420	Tfip11	100	92.354	Cricetulus_griseus_crigri
ENSSSCG00000009962	TFIP11	100	65.839	ENSCSEG00000014082	tfip11	100	66.157	Cynoglossus_semilaevis
ENSSSCG00000009962	TFIP11	100	66.076	ENSCVAG00000011674	tfip11	100	65.998	Cyprinodon_variegatus
ENSSSCG00000009962	TFIP11	100	65.952	ENSDARG00000056932	tfip11	100	66.429	Danio_rerio
ENSSSCG00000009962	TFIP11	100	96.057	ENSDNOG00000042556	TFIP11	100	96.057	Dasypus_novemcinctus
ENSSSCG00000009962	TFIP11	100	94.743	ENSDORG00000006263	Tfip11	100	95.102	Dipodomys_ordii
ENSSSCG00000009962	TFIP11	98	34.514	FBgn0024191	sip1	99	34.932	Drosophila_melanogaster
ENSSSCG00000009962	TFIP11	99	55.006	ENSEBUG00000015059	tfip11	98	57.031	Eptatretus_burgeri
ENSSSCG00000009962	TFIP11	100	90.681	ENSEASG00005014285	-	100	90.681	Equus_asinus_asinus
ENSSSCG00000009962	TFIP11	100	97.252	ENSEASG00005009760	-	100	97.252	Equus_asinus_asinus
ENSSSCG00000009962	TFIP11	100	91.039	ENSECAG00000004795	-	100	91.039	Equus_caballus
ENSSSCG00000009962	TFIP11	100	97.013	ENSECAG00000016242	-	100	97.013	Equus_caballus
ENSSSCG00000009962	TFIP11	92	86.292	ENSEEUG00000015847	TFIP11	100	86.292	Erinaceus_europaeus
ENSSSCG00000009962	TFIP11	100	66.941	ENSELUG00000011596	TFIP11	100	67.330	Esox_lucius
ENSSSCG00000009962	TFIP11	100	67.059	ENSELUG00000022017	tfip11	100	67.447	Esox_lucius
ENSSSCG00000009962	TFIP11	100	97.133	ENSFCAG00000031626	TFIP11	100	97.133	Felis_catus
ENSSSCG00000009962	TFIP11	100	74.791	ENSFALG00000008853	-	100	75.269	Ficedula_albicollis
ENSSSCG00000009962	TFIP11	100	89.247	ENSFALG00000008481	-	100	89.035	Ficedula_albicollis
ENSSSCG00000009962	TFIP11	100	96.057	ENSFDAG00000016663	TFIP11	100	96.057	Fukomys_damarensis
ENSSSCG00000009962	TFIP11	100	66.863	ENSFHEG00000011548	tfip11	100	66.941	Fundulus_heteroclitus
ENSSSCG00000009962	TFIP11	100	65.885	ENSGMOG00000004834	tfip11	100	65.299	Gadus_morhua
ENSSSCG00000009962	TFIP11	100	89.631	ENSGALG00000005623	TFIP11	100	89.631	Gallus_gallus
ENSSSCG00000009962	TFIP11	100	65.284	ENSGAFG00000012142	tfip11	100	65.603	Gambusia_affinis
ENSSSCG00000009962	TFIP11	100	66.509	ENSGACG00000009599	tfip11	100	66.038	Gasterosteus_aculeatus
ENSSSCG00000009962	TFIP11	100	88.517	ENSGAGG00000008196	TFIP11	100	88.517	Gopherus_agassizii
ENSSSCG00000009962	TFIP11	100	97.611	ENSGGOG00000004999	TFIP11	100	97.611	Gorilla_gorilla
ENSSSCG00000009962	TFIP11	100	67.497	ENSHBUG00000009935	tfip11	100	67.099	Haplochromis_burtoni
ENSSSCG00000009962	TFIP11	100	97.013	ENSHGLG00000008873	TFIP11	100	97.013	Heterocephalus_glaber_female
ENSSSCG00000009962	TFIP11	100	97.013	ENSHGLG00100016817	TFIP11	100	97.013	Heterocephalus_glaber_male
ENSSSCG00000009962	TFIP11	100	66.430	ENSHCOG00000015846	tfip11	100	66.903	Hippocampus_comes
ENSSSCG00000009962	TFIP11	100	65.595	ENSIPUG00000011965	tfip11	100	65.595	Ictalurus_punctatus
ENSSSCG00000009962	TFIP11	100	89.964	ENSSTOG00000013530	TFIP11	93	100.000	Ictidomys_tridecemlineatus
ENSSSCG00000009962	TFIP11	100	65.566	ENSKMAG00000013948	tfip11	100	65.161	Kryptolebias_marmoratus
ENSSSCG00000009962	TFIP11	100	66.981	ENSLBEG00000014079	tfip11	100	67.256	Labrus_bergylta
ENSSSCG00000009962	TFIP11	100	79.976	ENSLACG00000009243	TFIP11	100	79.976	Latimeria_chalumnae
ENSSSCG00000009962	TFIP11	99	70.490	ENSLOCG00000008684	tfip11	99	70.609	Lepisosteus_oculatus
ENSSSCG00000009962	TFIP11	100	97.491	ENSMFAG00000043406	TFIP11	100	97.491	Macaca_fascicularis
ENSSSCG00000009962	TFIP11	100	97.491	ENSMMUG00000023446	TFIP11	100	97.491	Macaca_mulatta
ENSSSCG00000009962	TFIP11	92	97.154	ENSMNEG00000039522	TFIP11	100	97.851	Macaca_nemestrina
ENSSSCG00000009962	TFIP11	100	97.491	ENSMLEG00000039426	TFIP11	100	97.491	Mandrillus_leucophaeus
ENSSSCG00000009962	TFIP11	100	66.981	ENSMAMG00000013817	tfip11	100	67.138	Mastacembelus_armatus
ENSSSCG00000009962	TFIP11	100	67.378	ENSMZEG00005016814	tfip11	100	66.981	Maylandia_zebra
ENSSSCG00000009962	TFIP11	100	86.532	ENSMGAG00000006881	TFIP11	100	86.532	Meleagris_gallopavo
ENSSSCG00000009962	TFIP11	100	91.995	ENSMAUG00000016136	Tfip11	100	91.995	Mesocricetus_auratus
ENSSSCG00000009962	TFIP11	100	96.177	ENSMICG00000013732	TFIP11	100	96.177	Microcebus_murinus
ENSSSCG00000009962	TFIP11	100	92.473	ENSMOCG00000021195	Tfip11	100	92.473	Microtus_ochrogaster
ENSSSCG00000009962	TFIP11	100	65.023	ENSMMOG00000017940	tfip11	100	65.187	Mola_mola
ENSSSCG00000009962	TFIP11	100	84.091	ENSMODG00000025040	-	100	83.971	Monodelphis_domestica
ENSSSCG00000009962	TFIP11	100	92.344	ENSMODG00000010710	TFIP11	100	92.344	Monodelphis_domestica
ENSSSCG00000009962	TFIP11	100	66.982	ENSMALG00000011938	tfip11	100	67.020	Monopterus_albus
ENSSSCG00000009962	TFIP11	100	92.124	MGP_CAROLIEiJ_G0027562	Tfip11	100	98.925	Mus_caroli
ENSSSCG00000009962	TFIP11	100	92.363	ENSMUSG00000029345	Tfip11	100	98.925	Mus_musculus
ENSSSCG00000009962	TFIP11	100	92.372	MGP_PahariEiJ_G0024144	-	100	98.925	Mus_pahari
ENSSSCG00000009962	TFIP11	100	92.363	MGP_SPRETEiJ_G0028560	Tfip11	100	98.925	Mus_spretus
ENSSSCG00000009962	TFIP11	98	97.439	ENSMPUG00000013605	TFIP11	93	97.439	Mustela_putorius_furo
ENSSSCG00000009962	TFIP11	100	97.013	ENSMLUG00000008015	TFIP11	100	97.013	Myotis_lucifugus
ENSSSCG00000009962	TFIP11	100	93.301	ENSNGAG00000001168	Tfip11	100	93.301	Nannospalax_galili
ENSSSCG00000009962	TFIP11	100	66.587	ENSNBRG00000005227	tfip11	100	66.785	Neolamprologus_brichardi
ENSSSCG00000009962	TFIP11	100	96.894	ENSNLEG00000007735	TFIP11	100	96.894	Nomascus_leucogenys
ENSSSCG00000009962	TFIP11	100	92.344	ENSMEUG00000006642	TFIP11	100	92.344	Notamacropus_eugenii
ENSSSCG00000009962	TFIP11	74	96.927	ENSOPRG00000013740	TFIP11	74	96.927	Ochotona_princeps
ENSSSCG00000009962	TFIP11	100	95.704	ENSODEG00000017086	TFIP11	100	96.181	Octodon_degus
ENSSSCG00000009962	TFIP11	100	67.378	ENSONIG00000013652	tfip11	100	67.335	Oreochromis_niloticus
ENSSSCG00000009962	TFIP11	100	95.704	ENSOCUG00000006298	TFIP11	100	95.704	Oryctolagus_cuniculus
ENSSSCG00000009962	TFIP11	100	65.836	ENSORLG00000008318	tfip11	100	65.480	Oryzias_latipes
ENSSSCG00000009962	TFIP11	100	66.746	ENSORLG00020012182	tfip11	100	66.391	Oryzias_latipes_hni
ENSSSCG00000009962	TFIP11	100	66.746	ENSORLG00015001303	tfip11	100	66.391	Oryzias_latipes_hsok
ENSSSCG00000009962	TFIP11	100	65.680	ENSOMEG00000000088	tfip11	100	65.444	Oryzias_melastigma
ENSSSCG00000009962	TFIP11	99	80.338	ENSOGAG00000029400	-	99	79.855	Otolemur_garnettii
ENSSSCG00000009962	TFIP11	100	97.611	ENSOGAG00000010584	-	100	97.611	Otolemur_garnettii
ENSSSCG00000009962	TFIP11	100	92.832	ENSOARG00000001236	TFIP11	100	93.070	Ovis_aries
ENSSSCG00000009962	TFIP11	100	97.611	ENSPPAG00000037529	TFIP11	100	97.611	Pan_paniscus
ENSSSCG00000009962	TFIP11	100	96.894	ENSPPRG00000010373	TFIP11	100	96.894	Panthera_pardus
ENSSSCG00000009962	TFIP11	100	97.013	ENSPTIG00000005731	TFIP11	100	97.013	Panthera_tigris_altaica
ENSSSCG00000009962	TFIP11	100	97.491	ENSPTRG00000014196	TFIP11	100	97.491	Pan_troglodytes
ENSSSCG00000009962	TFIP11	100	97.491	ENSPANG00000018711	TFIP11	100	97.491	Papio_anubis
ENSSSCG00000009962	TFIP11	100	68.609	ENSPKIG00000024728	tfip11	100	68.847	Paramormyrops_kingsleyae
ENSSSCG00000009962	TFIP11	100	89.593	ENSPSIG00000009979	TFIP11	100	89.593	Pelodiscus_sinensis
ENSSSCG00000009962	TFIP11	100	61.275	ENSPMGG00000021616	tfip11	100	61.249	Periophthalmus_magnuspinnatus
ENSSSCG00000009962	TFIP11	100	92.593	ENSPEMG00000009979	Tfip11	100	92.593	Peromyscus_maniculatus_bairdii
ENSSSCG00000009962	TFIP11	100	58.446	ENSPMAG00000005546	tfip11	100	58.625	Petromyzon_marinus
ENSSSCG00000009962	TFIP11	100	92.105	ENSPCIG00000020963	TFIP11	100	92.105	Phascolarctos_cinereus
ENSSSCG00000009962	TFIP11	100	65.799	ENSPFOG00000016485	tfip11	100	66.076	Poecilia_formosa
ENSSSCG00000009962	TFIP11	100	65.917	ENSPLAG00000003258	tfip11	100	66.194	Poecilia_latipinna
ENSSSCG00000009962	TFIP11	100	65.877	ENSPMEG00000008257	tfip11	100	66.076	Poecilia_mexicana
ENSSSCG00000009962	TFIP11	100	65.917	ENSPREG00000001742	tfip11	100	65.839	Poecilia_reticulata
ENSSSCG00000009962	TFIP11	100	88.402	ENSPPYG00000011666	TFIP11	100	88.402	Pongo_abelii
ENSSSCG00000009962	TFIP11	93	99.336	ENSPCAG00000005912	TFIP11	93	99.336	Procavia_capensis
ENSSSCG00000009962	TFIP11	100	96.655	ENSPCOG00000027919	TFIP11	100	96.655	Propithecus_coquereli
ENSSSCG00000009962	TFIP11	100	67.260	ENSPNYG00000018025	tfip11	100	66.863	Pundamilia_nyererei
ENSSSCG00000009962	TFIP11	100	66.903	ENSPNAG00000015368	tfip11	100	66.903	Pygocentrus_nattereri
ENSSSCG00000009962	TFIP11	100	92.593	ENSRNOG00000000663	Tfip11	100	92.593	Rattus_norvegicus
ENSSSCG00000009962	TFIP11	100	97.372	ENSRBIG00000044444	TFIP11	100	97.372	Rhinopithecus_bieti
ENSSSCG00000009962	TFIP11	100	97.372	ENSRROG00000034930	TFIP11	100	97.372	Rhinopithecus_roxellana
ENSSSCG00000009962	TFIP11	100	97.252	ENSSBOG00000035111	TFIP11	100	97.252	Saimiri_boliviensis_boliviensis
ENSSSCG00000009962	TFIP11	100	92.344	ENSSHAG00000014104	TFIP11	100	92.344	Sarcophilus_harrisii
ENSSSCG00000009962	TFIP11	100	68.765	ENSSFOG00015013856	tfip11	100	69.240	Scleropages_formosus
ENSSSCG00000009962	TFIP11	100	67.685	ENSSMAG00000011179	tfip11	100	67.840	Scophthalmus_maximus
ENSSSCG00000009962	TFIP11	100	67.059	ENSSDUG00000014159	tfip11	100	66.824	Seriola_dumerili
ENSSSCG00000009962	TFIP11	64	58.258	ENSSLDG00000001011	tfip11	99	57.895	Seriola_lalandi_dorsalis
ENSSSCG00000009962	TFIP11	77	94.942	ENSSARG00000007065	TFIP11	92	94.942	Sorex_araneus
ENSSSCG00000009962	TFIP11	92	88.381	ENSSPUG00000007618	TFIP11	98	88.381	Sphenodon_punctatus
ENSSSCG00000009962	TFIP11	100	66.864	ENSSPAG00000017719	tfip11	100	66.981	Stegastes_partitus
ENSSSCG00000009962	TFIP11	100	87.440	ENSTGUG00000007710	TFIP11	100	87.232	Taeniopygia_guttata
ENSSSCG00000009962	TFIP11	100	63.863	ENSTRUG00000016348	tfip11	100	63.507	Takifugu_rubripes
ENSSSCG00000009962	TFIP11	100	65.485	ENSTNIG00000015914	tfip11	100	66.076	Tetraodon_nigroviridis
ENSSSCG00000009962	TFIP11	74	97.491	ENSTBEG00000007895	TFIP11	74	97.491	Tupaia_belangeri
ENSSSCG00000009962	TFIP11	68	99.331	ENSTTRG00000009421	TFIP11	68	99.331	Tursiops_truncatus
ENSSSCG00000009962	TFIP11	86	96.676	ENSUAMG00000016248	TFIP11	93	96.676	Ursus_americanus
ENSSSCG00000009962	TFIP11	100	95.455	ENSUMAG00000015595	TFIP11	100	95.455	Ursus_maritimus
ENSSSCG00000009962	TFIP11	88	94.616	ENSVVUG00000015797	TFIP11	97	94.616	Vulpes_vulpes
ENSSSCG00000009962	TFIP11	94	81.609	ENSXETG00000003784	tfip11	99	81.609	Xenopus_tropicalis
ENSSSCG00000009962	TFIP11	100	65.718	ENSXCOG00000016947	tfip11	100	66.272	Xiphophorus_couchianus
ENSSSCG00000009962	TFIP11	100	65.758	ENSXMAG00000007524	tfip11	100	66.430	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000390	spliceosomal complex disassembly	-	ISS	Process
GO:0000784	nuclear chromosome, telomeric region	-	IEA	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005681	spliceosomal complex	-	ISS	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0031012	extracellular matrix	-	IEA	Component
GO:0031214	biomineral tissue development	-	IEA	Process
GO:0031333	negative regulation of protein complex assembly	-	IEA	Process
GO:0032091	negative regulation of protein binding	-	IEA	Process
GO:0071008	U2-type post-mRNA release spliceosomal complex	-	ISS	Component
GO:0071013	catalytic step 2 spliceosome	-	IEA	Component