EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000010027 (Gene tree)
Gene ID: 100739740
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 18789 bases
Position: chr14:48075348-48094136
Accession: 100739740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000052980	zf-C2H2	PF00096.26	6.1e-28	1	5
ENSSSCP00000052980	zf-C2H2	PF00096.26	6.1e-28	2	5
ENSSSCP00000052980	zf-C2H2	PF00096.26	6.1e-28	3	5
ENSSSCP00000052980	zf-C2H2	PF00096.26	6.1e-28	4	5
ENSSSCP00000052980	zf-C2H2	PF00096.26	6.1e-28	5	5
ENSSSCP00000010698	zf-C2H2	PF00096.26	1.2e-21	1	4
ENSSSCP00000010698	zf-C2H2	PF00096.26	1.2e-21	2	4
ENSSSCP00000010698	zf-C2H2	PF00096.26	1.2e-21	3	4
ENSSSCP00000010698	zf-C2H2	PF00096.26	1.2e-21	4	4
ENSSSCP00000050343	zf-C2H2	PF00096.26	6.7e-17	1	3
ENSSSCP00000050343	zf-C2H2	PF00096.26	6.7e-17	2	3
ENSSSCP00000050343	zf-C2H2	PF00096.26	6.7e-17	3	3
ENSSSCP00000052980	zf-met	PF12874.7	5.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000049659	PATZ1-203	5635	-	ENSSSCP00000050343	432 (aa)	-	A0A287B2H0
ENSSSCT00000065454	PATZ1-202	1876	XM_021073093	ENSSSCP00000052980	581 (aa)	XP_020928752	A0A287B916
ENSSSCT00000010984	PATZ1-201	3963	-	ENSSSCP00000010698	535 (aa)	-	F1RPB9

Gene Model

Click here to download ENSSSCG00000010027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000010027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000010027	PATZ1	100	98.881	ENSG00000100105	PATZ1	85	98.797	Homo_sapiens
ENSSSCG00000010027	PATZ1	99	60.526	ENSAPOG00000018447	patz1	87	57.192	Acanthochromis_polyacanthus
ENSSSCG00000010027	PATZ1	100	99.485	ENSAMEG00000007074	PATZ1	85	99.485	Ailuropoda_melanoleuca
ENSSSCG00000010027	PATZ1	100	60.437	ENSACIG00000016779	patz1	89	60.437	Amphilophus_citrinellus
ENSSSCG00000010027	PATZ1	100	57.800	ENSAPEG00000013354	patz1	88	57.964	Amphiprion_percula
ENSSSCG00000010027	PATZ1	100	63.210	ENSATEG00000011260	patz1	88	58.264	Anabas_testudineus
ENSSSCG00000010027	PATZ1	100	91.424	ENSAPLG00000003934	PATZ1	99	90.395	Anas_platyrhynchos
ENSSSCG00000010027	PATZ1	100	98.881	ENSANAG00000029603	PATZ1	85	98.797	Aotus_nancymaae
ENSSSCG00000010027	PATZ1	99	62.500	ENSAMXG00000002273	patz1	88	62.500	Astyanax_mexicanus
ENSSSCG00000010027	PATZ1	100	99.313	ENSBTAG00000005478	PATZ1	85	99.313	Bos_taurus
ENSSSCG00000010027	PATZ1	100	98.881	ENSCJAG00000010978	PATZ1	85	98.797	Callithrix_jacchus
ENSSSCG00000010027	PATZ1	100	99.485	ENSCAFG00000013087	PATZ1	85	99.485	Canis_familiaris
ENSSSCG00000010027	PATZ1	100	98.969	ENSCHIG00000020203	PATZ1	85	98.969	Capra_hircus
ENSSSCG00000010027	PATZ1	100	99.141	ENSTSYG00000033183	PATZ1	85	99.141	Carlito_syrichta
ENSSSCG00000010027	PATZ1	100	98.881	ENSCCAG00000028772	PATZ1	85	98.797	Cebus_capucinus
ENSSSCG00000010027	PATZ1	100	99.306	ENSCATG00000006101	PATZ1	85	98.969	Cercocebus_atys
ENSSSCG00000010027	PATZ1	100	91.595	ENSCPBG00000011277	PATZ1	85	90.566	Chrysemys_picta_bellii
ENSSSCG00000010027	PATZ1	100	99.074	ENSCANG00000024972	PATZ1	85	98.969	Colobus_angolensis_palliatus
ENSSSCG00000010027	PATZ1	100	96.220	ENSCGRG00001004071	Patz1	84	96.220	Cricetulus_griseus_chok1gshd
ENSSSCG00000010027	PATZ1	100	98.148	ENSCGRG00000004814	Patz1	91	97.938	Cricetulus_griseus_crigri
ENSSSCG00000010027	PATZ1	100	54.934	ENSCSEG00000001385	patz1	88	54.723	Cynoglossus_semilaevis
ENSSSCG00000010027	PATZ1	100	59.162	ENSCVAG00000007684	patz1	88	58.278	Cyprinodon_variegatus
ENSSSCG00000010027	PATZ1	99	60.488	ENSDARG00000076584	patz1	86	58.730	Danio_rerio
ENSSSCG00000010027	PATZ1	88	99.416	ENSDNOG00000003183	PATZ1	83	99.416	Dasypus_novemcinctus
ENSSSCG00000010027	PATZ1	100	99.141	ENSDORG00000023834	Patz1	85	99.141	Dipodomys_ordii
ENSSSCG00000010027	PATZ1	100	99.141	ENSECAG00000025030	PATZ1	85	99.141	Equus_caballus
ENSSSCG00000010027	PATZ1	99	62.972	ENSELUG00000002333	patz1	88	58.010	Esox_lucius
ENSSSCG00000010027	PATZ1	100	99.485	ENSFCAG00000030253	PATZ1	85	99.485	Felis_catus
ENSSSCG00000010027	PATZ1	100	91.595	ENSFALG00000007450	PATZ1	99	90.566	Ficedula_albicollis
ENSSSCG00000010027	PATZ1	100	97.917	ENSFDAG00000005614	PATZ1	88	94.854	Fukomys_damarensis
ENSSSCG00000010027	PATZ1	100	57.712	ENSFHEG00000014755	patz1	87	57.712	Fundulus_heteroclitus
ENSSSCG00000010027	PATZ1	98	54.146	ENSGMOG00000001062	patz1	87	53.971	Gadus_morhua
ENSSSCG00000010027	PATZ1	100	91.424	ENSGALG00000006934	PATZ1	84	90.395	Gallus_gallus
ENSSSCG00000010027	PATZ1	100	59.124	ENSGAFG00000010053	patz1	87	57.812	Gambusia_affinis
ENSSSCG00000010027	PATZ1	100	91.595	ENSGAGG00000003214	PATZ1	100	90.566	Gopherus_agassizii
ENSSSCG00000010027	PATZ1	100	99.074	ENSGGOG00000017171	PATZ1	85	98.969	Gorilla_gorilla
ENSSSCG00000010027	PATZ1	99	63.133	ENSHCOG00000017644	patz1	81	58.669	Hippocampus_comes
ENSSSCG00000010027	PATZ1	99	60.000	ENSIPUG00000017653	patz1	88	59.688	Ictalurus_punctatus
ENSSSCG00000010027	PATZ1	100	99.067	ENSSTOG00000020707	PATZ1	85	98.969	Ictidomys_tridecemlineatus
ENSSSCG00000010027	PATZ1	100	96.913	ENSJJAG00000015259	Patz1	85	96.913	Jaculus_jaculus
ENSSSCG00000010027	PATZ1	100	57.358	ENSKMAG00000008157	patz1	87	57.807	Kryptolebias_marmoratus
ENSSSCG00000010027	PATZ1	100	98.969	ENSLAFG00000002317	PATZ1	86	98.969	Loxodonta_africana
ENSSSCG00000010027	PATZ1	100	99.306	ENSMFAG00000040968	PATZ1	85	98.969	Macaca_fascicularis
ENSSSCG00000010027	PATZ1	100	99.306	ENSMNEG00000037588	PATZ1	85	98.969	Macaca_nemestrina
ENSSSCG00000010027	PATZ1	100	99.306	ENSMLEG00000030938	PATZ1	85	98.969	Mandrillus_leucophaeus
ENSSSCG00000010027	PATZ1	100	57.539	ENSMAMG00000023652	patz1	89	56.825	Mastacembelus_armatus
ENSSSCG00000010027	PATZ1	100	87.650	ENSMGAG00000008439	PATZ1	99	86.621	Meleagris_gallopavo
ENSSSCG00000010027	PATZ1	100	98.507	ENSMAUG00000004129	Patz1	85	98.454	Mesocricetus_auratus
ENSSSCG00000010027	PATZ1	100	98.797	ENSMICG00000005430	PATZ1	85	98.797	Microcebus_murinus
ENSSSCG00000010027	PATZ1	100	98.148	ENSMOCG00000014488	Patz1	85	98.110	Microtus_ochrogaster
ENSSSCG00000010027	PATZ1	99	54.300	ENSMMOG00000021679	patz1	88	53.913	Mola_mola
ENSSSCG00000010027	PATZ1	100	57.143	ENSMALG00000021172	patz1	88	56.645	Monopterus_albus
ENSSSCG00000010027	PATZ1	100	97.948	MGP_CAROLIEiJ_G0016007	Patz1	85	97.938	Mus_caroli
ENSSSCG00000010027	PATZ1	100	98.134	ENSMUSG00000020453	Patz1	85	98.110	Mus_musculus
ENSSSCG00000010027	PATZ1	100	98.134	MGP_PahariEiJ_G0016884	Patz1	85	98.110	Mus_pahari
ENSSSCG00000010027	PATZ1	100	98.134	MGP_SPRETEiJ_G0016846	Patz1	85	98.110	Mus_spretus
ENSSSCG00000010027	PATZ1	100	99.313	ENSMLUG00000009942	PATZ1	85	99.313	Myotis_lucifugus
ENSSSCG00000010027	PATZ1	100	98.507	ENSNGAG00000010268	Patz1	85	98.454	Nannospalax_galili
ENSSSCG00000010027	PATZ1	100	60.194	ENSNBRG00000016032	patz1	89	60.194	Neolamprologus_brichardi
ENSSSCG00000010027	PATZ1	80	94.194	ENSMEUG00000016293	PATZ1	99	94.181	Notamacropus_eugenii
ENSSSCG00000010027	PATZ1	100	98.282	ENSODEG00000003589	PATZ1	85	98.282	Octodon_degus
ENSSSCG00000010027	PATZ1	100	58.793	ENSONIG00000004248	patz1	87	58.793	Oreochromis_niloticus
ENSSSCG00000010027	PATZ1	100	93.664	ENSOANG00000014654	PATZ1	85	94.007	Ornithorhynchus_anatinus
ENSSSCG00000010027	PATZ1	100	58.652	ENSORLG00020010937	patz1	87	57.539	Oryzias_latipes_hni
ENSSSCG00000010027	PATZ1	100	57.812	ENSORLG00015007396	patz1	87	57.639	Oryzias_latipes_hsok
ENSSSCG00000010027	PATZ1	100	57.343	ENSOMEG00000006636	patz1	87	57.343	Oryzias_melastigma
ENSSSCG00000010027	PATZ1	100	99.141	ENSOGAG00000027905	PATZ1	85	99.141	Otolemur_garnettii
ENSSSCG00000010027	PATZ1	100	99.074	ENSPPAG00000033227	PATZ1	85	98.969	Pan_paniscus
ENSSSCG00000010027	PATZ1	100	99.485	ENSPPRG00000001573	PATZ1	85	99.485	Panthera_pardus
ENSSSCG00000010027	PATZ1	100	99.485	ENSPTIG00000007937	PATZ1	89	99.485	Panthera_tigris_altaica
ENSSSCG00000010027	PATZ1	100	99.074	ENSPTRG00000014268	PATZ1	85	98.969	Pan_troglodytes
ENSSSCG00000010027	PATZ1	100	99.306	ENSPANG00000006821	PATZ1	85	98.969	Papio_anubis
ENSSSCG00000010027	PATZ1	100	63.109	ENSPKIG00000019584	patz1	90	62.645	Paramormyrops_kingsleyae
ENSSSCG00000010027	PATZ1	71	83.535	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
ENSSSCG00000010027	PATZ1	68	95.202	ENSPSIG00000011562	-	100	95.429	Pelodiscus_sinensis
ENSSSCG00000010027	PATZ1	100	56.672	ENSPMGG00000010196	patz1	88	56.672	Periophthalmus_magnuspinnatus
ENSSSCG00000010027	PATZ1	100	98.321	ENSPEMG00000005321	Patz1	85	98.110	Peromyscus_maniculatus_bairdii
ENSSSCG00000010027	PATZ1	100	57.366	ENSPLAG00000010425	patz1	100	56.908	Poecilia_latipinna
ENSSSCG00000010027	PATZ1	100	57.465	ENSPMEG00000000255	patz1	87	57.639	Poecilia_mexicana
ENSSSCG00000010027	PATZ1	100	56.704	ENSPREG00000002440	patz1	88	56.866	Poecilia_reticulata
ENSSSCG00000010027	PATZ1	100	99.141	ENSPPYG00000011732	PATZ1	85	99.141	Pongo_abelii
ENSSSCG00000010027	PATZ1	100	98.625	ENSPCOG00000019729	PATZ1	85	98.625	Propithecus_coquereli
ENSSSCG00000010027	PATZ1	100	99.485	ENSPVAG00000001749	PATZ1	85	99.485	Pteropus_vampyrus
ENSSSCG00000010027	PATZ1	100	59.508	ENSPNYG00000013542	patz1	88	59.508	Pundamilia_nyererei
ENSSSCG00000010027	PATZ1	99	60.390	ENSPNAG00000017222	patz1	99	58.852	Pygocentrus_nattereri
ENSSSCG00000010027	PATZ1	100	99.074	ENSRBIG00000044231	PATZ1	85	98.969	Rhinopithecus_bieti
ENSSSCG00000010027	PATZ1	100	99.074	ENSRROG00000037155	PATZ1	85	98.969	Rhinopithecus_roxellana
ENSSSCG00000010027	PATZ1	100	98.881	ENSSBOG00000003894	PATZ1	85	98.797	Saimiri_boliviensis_boliviensis
ENSSSCG00000010027	PATZ1	75	91.071	ENSSFOG00015013244	patz1	67	91.071	Scleropages_formosus
ENSSSCG00000010027	PATZ1	100	90.411	ENSSPUG00000015298	PATZ1	83	89.555	Sphenodon_punctatus
ENSSSCG00000010027	PATZ1	100	57.742	ENSTRUG00000015366	patz1	88	59.756	Takifugu_rubripes
ENSSSCG00000010027	PATZ1	100	99.485	ENSTTRG00000010279	PATZ1	85	99.485	Tursiops_truncatus
ENSSSCG00000010027	PATZ1	100	99.440	ENSUAMG00000015014	PATZ1	84	99.440	Ursus_americanus
ENSSSCG00000010027	PATZ1	100	75.897	ENSXETG00000004190	patz1	88	75.897	Xenopus_tropicalis
ENSSSCG00000010027	PATZ1	100	57.812	ENSXMAG00000015531	patz1	87	57.986	Xiphophorus_maculatus