EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000010156 (Gene tree)
Gene ID: 100154004
Gene Symbol: ARID4B
Alias: BCAA|BRCAA1|RBP1L1|SAP180
Full Name: RNA binding motif protein 34
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 183782 bases
Position: chr14:55924357-56108138
Accession: 100154004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000041266	Tudor-knot	PF11717.8	2e-11	1	1
ENSSSCP00000048429	Tudor-knot	PF11717.8	2.1e-11	1	1
ENSSSCP00000050943	Tudor-knot	PF11717.8	2.2e-11	1	1
ENSSSCP00000010832	Tudor-knot	PF11717.8	2.2e-11	1	1
ENSSSCP00000010833	RRM_1	PF00076.22	4.2e-29	1	2
ENSSSCP00000010833	RRM_1	PF00076.22	4.2e-29	2	2
ENSSSCP00000057714	RRM_1	PF00076.22	5.4e-29	1	2
ENSSSCP00000057714	RRM_1	PF00076.22	5.4e-29	2	2
ENSSSCP00000049369	RRM_1	PF00076.22	4.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000041429	ARID4B-204	8370	-	ENSSSCP00000044184	1161 (aa)	-	A0A287AJV8
ENSSSCT00000056218	ARID4B-208	1317	XM_021074093	ENSSSCP00000049369	404 (aa)	XP_020929752	A0A287AZT6
ENSSSCT00000055174	ARID4B-206	3865	-	ENSSSCP00000041266	1271 (aa)	-	A0A287ABT0
ENSSSCT00000058584	ARID4B-201	6149	-	ENSSSCP00000050943	1154 (aa)	-	A0A287B3A5
ENSSSCT00000051480	ARID4B-209	1406	-	ENSSSCP00000057714	448 (aa)	-	A0A287BMI9
ENSSSCT00000048287	ARID4B-205	6261	-	ENSSSCP00000048429	1150 (aa)	-	A0A287AX31
ENSSSCT00000011121	ARID4B-207	1404	XM_005670960	ENSSSCP00000010833	424 (aa)	XP_005671017	F1RGW8
ENSSSCT00000011120	ARID4B-202	6104	XM_021074399	ENSSSCP00000010832	1309 (aa)	XP_020930058	F1RGW9
ENSSSCT00000053189	ARID4B-203	5852	XM_021074402	ENSSSCP00000057958	1225 (aa)	XP_020930061	A0A287BN71

Gene Model

Click here to download ENSSSCG00000010156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000010156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000010156	ARID4B	100	92.922	ENSG00000054267	ARID4B	100	96.687	Homo_sapiens
ENSSSCG00000010156	ARID4B	99	94.584	ENSAMEG00000008801	ARID4B	100	94.584	Ailuropoda_melanoleuca
ENSSSCG00000010156	ARID4B	100	77.543	ENSAPLG00000004422	ARID4B	100	77.259	Anas_platyrhynchos
ENSSSCG00000010156	ARID4B	99	72.644	ENSACAG00000001289	ARID4B	100	73.091	Anolis_carolinensis
ENSSSCG00000010156	ARID4B	100	92.700	ENSANAG00000038088	ARID4B	100	92.700	Aotus_nancymaae
ENSSSCG00000010156	ARID4B	71	89.333	ENSAMXG00000003657	tomm20a	86	67.470	Astyanax_mexicanus
ENSSSCG00000010156	ARID4B	100	93.826	ENSBTAG00000000222	ARID4B	100	93.826	Bos_taurus
ENSSSCG00000010156	ARID4B	100	91.857	ENSCJAG00000018055	ARID4B	100	91.781	Callithrix_jacchus
ENSSSCG00000010156	ARID4B	100	94.741	ENSCAFG00000011439	ARID4B	100	94.741	Canis_familiaris
ENSSSCG00000010156	ARID4B	99	94.479	ENSCAFG00020027130	ARID4B	99	94.479	Canis_lupus_dingo
ENSSSCG00000010156	ARID4B	99	90.360	ENSCHIG00000020742	ARID4B	100	90.360	Capra_hircus
ENSSSCG00000010156	ARID4B	100	92.460	ENSTSYG00000010028	ARID4B	100	92.460	Carlito_syrichta
ENSSSCG00000010156	ARID4B	99	89.422	ENSCPOG00000034766	ARID4B	100	90.030	Cavia_porcellus
ENSSSCG00000010156	ARID4B	100	92.624	ENSCCAG00000021520	ARID4B	100	92.624	Cebus_capucinus
ENSSSCG00000010156	ARID4B	100	93.004	ENSCATG00000042166	ARID4B	100	92.624	Cercocebus_atys
ENSSSCG00000010156	ARID4B	100	91.476	ENSCLAG00000003255	ARID4B	100	91.857	Chinchilla_lanigera
ENSSSCG00000010156	ARID4B	100	92.928	ENSCSAG00000010069	ARID4B	100	92.928	Chlorocebus_sabaeus
ENSSSCG00000010156	ARID4B	76	100.000	ENSCHOG00000001152	ARID4B	74	100.000	Choloepus_hoffmanni
ENSSSCG00000010156	ARID4B	100	77.231	ENSCPBG00000004501	ARID4B	100	77.063	Chrysemys_picta_bellii
ENSSSCG00000010156	ARID4B	100	89.049	ENSCANG00000027498	ARID4B	100	84.175	Colobus_angolensis_palliatus
ENSSSCG00000010156	ARID4B	100	89.058	ENSCGRG00001014397	Arid4b	100	89.590	Cricetulus_griseus_chok1gshd
ENSSSCG00000010156	ARID4B	99	89.041	ENSCGRG00000004910	Arid4b	100	89.574	Cricetulus_griseus_crigri
ENSSSCG00000010156	ARID4B	56	92.598	ENSDNOG00000005711	ARID4B	100	92.598	Dasypus_novemcinctus
ENSSSCG00000010156	ARID4B	99	90.847	ENSDORG00000006422	Arid4b	100	90.847	Dipodomys_ordii
ENSSSCG00000010156	ARID4B	90	89.319	ENSETEG00000005596	ARID4B	92	88.755	Echinops_telfairi
ENSSSCG00000010156	ARID4B	99	93.435	ENSEASG00005000677	ARID4B	99	92.748	Equus_asinus_asinus
ENSSSCG00000010156	ARID4B	99	95.115	ENSECAG00000017836	ARID4B	99	94.885	Equus_caballus
ENSSSCG00000010156	ARID4B	85	97.222	ENSEEUG00000005378	ARID4B	86	97.222	Erinaceus_europaeus
ENSSSCG00000010156	ARID4B	100	93.598	ENSFCAG00000030096	ARID4B	100	93.598	Felis_catus
ENSSSCG00000010156	ARID4B	100	78.728	ENSFALG00000013548	ARID4B	98	79.485	Ficedula_albicollis
ENSSSCG00000010156	ARID4B	99	90.625	ENSFDAG00000014194	ARID4B	100	90.625	Fukomys_damarensis
ENSSSCG00000010156	ARID4B	62	61.142	ENSFHEG00000003798	tomm20a	54	61.602	Fundulus_heteroclitus
ENSSSCG00000010156	ARID4B	100	76.154	ENSGAGG00000020544	ARID4B	98	76.230	Gopherus_agassizii
ENSSSCG00000010156	ARID4B	100	93.374	ENSGGOG00000022080	ARID4B	100	93.374	Gorilla_gorilla
ENSSSCG00000010156	ARID4B	62	60.414	ENSHBUG00000020369	tomm20a	53	60.744	Haplochromis_burtoni
ENSSSCG00000010156	ARID4B	100	90.957	ENSHGLG00000012546	ARID4B	100	90.729	Heterocephalus_glaber_female
ENSSSCG00000010156	ARID4B	100	90.957	ENSHGLG00100015436	ARID4B	100	90.729	Heterocephalus_glaber_male
ENSSSCG00000010156	ARID4B	94	73.608	ENSHCOG00000010376	tomm20a	70	73.786	Hippocampus_comes
ENSSSCG00000010156	ARID4B	100	91.413	ENSSTOG00000002810	ARID4B	100	91.793	Ictidomys_tridecemlineatus
ENSSSCG00000010156	ARID4B	100	85.301	ENSJJAG00000021368	Arid4b	100	85.910	Jaculus_jaculus
ENSSSCG00000010156	ARID4B	99	92.824	ENSLAFG00000014295	ARID4B	100	92.137	Loxodonta_africana
ENSSSCG00000010156	ARID4B	100	92.700	ENSMFAG00000044016	ARID4B	100	92.700	Macaca_fascicularis
ENSSSCG00000010156	ARID4B	100	92.700	ENSMMUG00000007141	ARID4B	100	92.700	Macaca_mulatta
ENSSSCG00000010156	ARID4B	100	92.618	ENSMNEG00000014840	ARID4B	100	92.390	Macaca_nemestrina
ENSSSCG00000010156	ARID4B	99	92.813	ENSMLEG00000033583	ARID4B	100	92.813	Mandrillus_leucophaeus
ENSSSCG00000010156	ARID4B	62	60.276	ENSMZEG00005009879	tomm20a	53	60.606	Maylandia_zebra
ENSSSCG00000010156	ARID4B	100	78.728	ENSMGAG00000011896	ARID4B	100	79.410	Meleagris_gallopavo
ENSSSCG00000010156	ARID4B	100	92.711	ENSMICG00000016358	ARID4B	100	92.787	Microcebus_murinus
ENSSSCG00000010156	ARID4B	64	75.787	ENSMMOG00000000561	tomm20a	69	74.757	Mola_mola
ENSSSCG00000010156	ARID4B	100	83.954	ENSMODG00000008417	ARID4B	100	84.791	Monodelphis_domestica
ENSSSCG00000010156	ARID4B	100	87.985	MGP_CAROLIEiJ_G0018236	Arid4b	100	88.365	Mus_caroli
ENSSSCG00000010156	ARID4B	100	87.452	ENSMUSG00000039219	Arid4b	100	87.833	Mus_musculus
ENSSSCG00000010156	ARID4B	100	88.137	MGP_PahariEiJ_G0019286	Arid4b	100	88.517	Mus_pahari
ENSSSCG00000010156	ARID4B	100	87.300	MGP_SPRETEiJ_G0019094	Arid4b	100	87.681	Mus_spretus
ENSSSCG00000010156	ARID4B	100	93.598	ENSMPUG00000002906	ARID4B	100	93.598	Mustela_putorius_furo
ENSSSCG00000010156	ARID4B	99	90.951	ENSMLUG00000016232	ARID4B	100	90.798	Myotis_lucifugus
ENSSSCG00000010156	ARID4B	100	87.746	ENSNGAG00000014629	Arid4b	100	87.670	Nannospalax_galili
ENSSSCG00000010156	ARID4B	100	93.004	ENSNLEG00000002665	ARID4B	100	93.232	Nomascus_leucogenys
ENSSSCG00000010156	ARID4B	100	91.020	ENSODEG00000005373	ARID4B	100	90.868	Octodon_degus
ENSSSCG00000010156	ARID4B	99	92.155	ENSOCUG00000006605	ARID4B	100	91.851	Oryctolagus_cuniculus
ENSSSCG00000010156	ARID4B	89	74.760	ENSORLG00020013988	tomm20a	72	74.458	Oryzias_latipes_hni
ENSSSCG00000010156	ARID4B	89	75.362	ENSORLG00015022835	tomm20a	72	75.061	Oryzias_latipes_hsok
ENSSSCG00000010156	ARID4B	99	93.123	ENSOARG00000003481	ARID4B	97	92.972	Ovis_aries
ENSSSCG00000010156	ARID4B	100	92.998	ENSPPAG00000031651	ARID4B	100	92.922	Pan_paniscus
ENSSSCG00000010156	ARID4B	100	93.745	ENSPPRG00000013739	ARID4B	100	93.745	Panthera_pardus
ENSSSCG00000010156	ARID4B	100	91.686	ENSPTIG00000012520	ARID4B	100	91.826	Panthera_tigris_altaica
ENSSSCG00000010156	ARID4B	85	92.176	ENSPTRG00000048786	-	95	92.086	Pan_troglodytes
ENSSSCG00000010156	ARID4B	100	93.227	ENSPTRG00000002129	ARID4B	100	93.151	Pan_troglodytes
ENSSSCG00000010156	ARID4B	99	92.232	ENSPANG00000013611	ARID4B	100	92.232	Papio_anubis
ENSSSCG00000010156	ARID4B	93	77.066	ENSPSIG00000011632	ARID4B	99	76.948	Pelodiscus_sinensis
ENSSSCG00000010156	ARID4B	100	83.409	ENSPCIG00000029756	ARID4B	100	83.562	Phascolarctos_cinereus
ENSSSCG00000010156	ARID4B	62	61.978	ENSPFOG00000019430	tomm20a	56	60.548	Poecilia_formosa
ENSSSCG00000010156	ARID4B	62	61.699	ENSPLAG00000010554	tomm20a	56	61.295	Poecilia_latipinna
ENSSSCG00000010156	ARID4B	62	61.699	ENSPREG00000007996	tomm20a	54	61.433	Poecilia_reticulata
ENSSSCG00000010156	ARID4B	100	92.998	ENSPPYG00000000098	ARID4B	100	92.922	Pongo_abelii
ENSSSCG00000010156	ARID4B	100	92.933	ENSPCOG00000024328	ARID4B	100	92.933	Propithecus_coquereli
ENSSSCG00000010156	ARID4B	100	90.465	ENSPVAG00000015159	ARID4B	100	90.084	Pteropus_vampyrus
ENSSSCG00000010156	ARID4B	87	86.174	ENSRNOG00000016391	LOC100912163	97	86.696	Rattus_norvegicus
ENSSSCG00000010156	ARID4B	99	87.707	ENSRBIG00000042029	ARID4B	100	85.149	Rhinopithecus_bieti
ENSSSCG00000010156	ARID4B	100	92.928	ENSRROG00000045203	ARID4B	100	92.928	Rhinopithecus_roxellana
ENSSSCG00000010156	ARID4B	83	91.674	ENSSBOG00000020196	ARID4B	100	91.674	Saimiri_boliviensis_boliviensis
ENSSSCG00000010156	ARID4B	100	84.015	ENSSHAG00000015214	ARID4B	100	84.470	Sarcophilus_harrisii
ENSSSCG00000010156	ARID4B	61	58.172	ENSSFOG00015000132	arid4b	55	58.146	Scleropages_formosus
ENSSSCG00000010156	ARID4B	99	52.544	ENSSDUG00000003019	tomm20a	53	61.528	Seriola_dumerili
ENSSSCG00000010156	ARID4B	100	77.534	ENSSPUG00000015466	ARID4B	98	76.853	Sphenodon_punctatus
ENSSSCG00000010156	ARID4B	100	78.767	ENSTGUG00000010246	ARID4B	100	78.995	Taeniopygia_guttata
ENSSSCG00000010156	ARID4B	88	77.431	ENSTBEG00000003961	ARID4B	80	84.582	Tupaia_belangeri
ENSSSCG00000010156	ARID4B	100	94.207	ENSTTRG00000002228	ARID4B	100	94.131	Tursiops_truncatus
ENSSSCG00000010156	ARID4B	99	93.745	ENSUMAG00000006905	ARID4B	100	93.586	Ursus_maritimus
ENSSSCG00000010156	ARID4B	69	94.500	ENSVPAG00000006841	ARID4B	69	94.500	Vicugna_pacos
ENSSSCG00000010156	ARID4B	99	93.210	ENSVVUG00000008154	ARID4B	99	93.287	Vulpes_vulpes