EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000010198 (Gene tree)
Gene ID: 100157879
Gene Symbol: BMS1
Alias: BMS1L|KIAA0187
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 40685 bases
Position: chr14:61087610-61128294
Accession: 100157879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000031705	AARP2CN	PF08142.12	9e-32	1	1
ENSSSCP00000010874	AARP2CN	PF08142.12	2.3e-31	1	1
ENSSSCP00000025609	AARP2CN	PF08142.12	2.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000064258	BMS1-202	7016	-	ENSSSCP00000031705	1244 (aa)	-	A0A286ZJR5
ENSSSCT00000026474	BMS1-203	6495	-	ENSSSCP00000025609	1284 (aa)	-	F1RG23
ENSSSCT00000011164	BMS1-201	4283	XM_005670994	ENSSSCP00000010874	1284 (aa)	XP_005671051	F1RG23

Gene Model

Click here to download ENSSSCG00000010198's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000010198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000010198	BMS1	99	89.556	ENSG00000165733	BMS1	99	89.400	Homo_sapiens
ENSSSCG00000010198	BMS1	70	73.427	ENSAPOG00000002296	bms1	99	63.136	Acanthochromis_polyacanthus
ENSSSCG00000010198	BMS1	99	90.923	ENSAMEG00000016834	BMS1	99	91.304	Ailuropoda_melanoleuca
ENSSSCG00000010198	BMS1	87	69.305	ENSACIG00000002588	bms1	85	78.500	Amphilophus_citrinellus
ENSSSCG00000010198	BMS1	86	69.076	ENSAOCG00000018088	bms1	99	66.539	Amphiprion_ocellaris
ENSSSCG00000010198	BMS1	84	70.513	ENSAPEG00000014673	bms1	98	66.667	Amphiprion_percula
ENSSSCG00000010198	BMS1	89	69.342	ENSATEG00000023465	bms1	53	67.125	Anabas_testudineus
ENSSSCG00000010198	BMS1	97	73.039	ENSAPLG00000003759	BMS1	100	72.764	Anas_platyrhynchos
ENSSSCG00000010198	BMS1	99	71.352	ENSACAG00000004537	-	99	71.582	Anolis_carolinensis
ENSSSCG00000010198	BMS1	99	88.785	ENSANAG00000023432	BMS1	99	88.162	Aotus_nancymaae
ENSSSCG00000010198	BMS1	87	68.209	ENSACLG00000001294	bms1	99	62.317	Astatotilapia_calliptera
ENSSSCG00000010198	BMS1	99	94.081	ENSBTAG00000012878	BMS1	99	93.692	Bos_taurus
ENSSSCG00000010198	BMS1	82	52.657	WBGene00022021	Y61A9LA.10	99	52.471	Caenorhabditis_elegans
ENSSSCG00000010198	BMS1	99	89.149	ENSCJAG00000021705	BMS1	99	88.318	Callithrix_jacchus
ENSSSCG00000010198	BMS1	99	92.146	ENSCAFG00000007114	BMS1	99	91.913	Canis_familiaris
ENSSSCG00000010198	BMS1	99	92.146	ENSCAFG00020025282	BMS1	99	91.913	Canis_lupus_dingo
ENSSSCG00000010198	BMS1	99	94.081	ENSCHIG00000023251	BMS1	99	93.692	Capra_hircus
ENSSSCG00000010198	BMS1	99	82.670	ENSCAPG00000008652	BMS1	99	81.484	Cavia_aperea
ENSSSCG00000010198	BMS1	99	86.729	ENSCPOG00000000502	BMS1	99	85.547	Cavia_porcellus
ENSSSCG00000010198	BMS1	99	74.106	ENSCCAG00000024969	-	99	72.996	Cebus_capucinus
ENSSSCG00000010198	BMS1	93	67.851	ENSCATG00000008695	-	97	66.753	Cercocebus_atys
ENSSSCG00000010198	BMS1	99	89.486	ENSCATG00000030625	-	99	89.720	Cercocebus_atys
ENSSSCG00000010198	BMS1	99	86.729	ENSCLAG00000002446	BMS1	99	86.406	Chinchilla_lanigera
ENSSSCG00000010198	BMS1	99	89.720	ENSCSAG00000011118	BMS1	99	89.953	Chlorocebus_sabaeus
ENSSSCG00000010198	BMS1	99	88.336	ENSCHOG00000011055	BMS1	99	89.191	Choloepus_hoffmanni
ENSSSCG00000010198	BMS1	99	75.250	ENSCPBG00000025581	BMS1	99	74.637	Chrysemys_picta_bellii
ENSSSCG00000010198	BMS1	79	59.322	ENSCING00000003181	-	99	59.322	Ciona_intestinalis
ENSSSCG00000010198	BMS1	67	57.407	ENSCSAVG00000004113	-	88	55.374	Ciona_savignyi
ENSSSCG00000010198	BMS1	99	90.164	ENSCANG00000011609	BMS1	99	89.252	Colobus_angolensis_palliatus
ENSSSCG00000010198	BMS1	99	86.625	ENSCGRG00001019461	Bms1	99	86.547	Cricetulus_griseus_chok1gshd
ENSSSCG00000010198	BMS1	99	86.625	ENSCGRG00000009016	Bms1	99	86.547	Cricetulus_griseus_crigri
ENSSSCG00000010198	BMS1	88	68.831	ENSCSEG00000002469	bms1	50	69.044	Cynoglossus_semilaevis
ENSSSCG00000010198	BMS1	85	69.726	ENSCVAG00000008371	bms1	54	68.161	Cyprinodon_variegatus
ENSSSCG00000010198	BMS1	88	67.987	ENSDARG00000054154	bms1	99	62.897	Danio_rerio
ENSSSCG00000010198	BMS1	99	90.240	ENSDNOG00000015761	BMS1	99	89.760	Dasypus_novemcinctus
ENSSSCG00000010198	BMS1	99	88.203	ENSDORG00000002982	Bms1	99	87.734	Dipodomys_ordii
ENSSSCG00000010198	BMS1	78	58.722	FBgn0036686	CG7728	94	59.169	Drosophila_melanogaster
ENSSSCG00000010198	BMS1	88	81.662	ENSETEG00000009554	BMS1	91	82.371	Echinops_telfairi
ENSSSCG00000010198	BMS1	99	92.846	ENSEASG00005006894	BMS1	99	93.235	Equus_asinus_asinus
ENSSSCG00000010198	BMS1	99	92.768	ENSECAG00000001358	BMS1	99	93.157	Equus_caballus
ENSSSCG00000010198	BMS1	89	67.235	ENSELUG00000001756	bms1	94	68.366	Esox_lucius
ENSSSCG00000010198	BMS1	99	92.146	ENSFCAG00000011220	BMS1	99	91.680	Felis_catus
ENSSSCG00000010198	BMS1	100	71.170	ENSFALG00000006882	BMS1	100	72.155	Ficedula_albicollis
ENSSSCG00000010198	BMS1	99	85.324	ENSFDAG00000001422	BMS1	99	84.531	Fukomys_damarensis
ENSSSCG00000010198	BMS1	85	70.270	ENSFHEG00000003367	bms1	97	68.279	Fundulus_heteroclitus
ENSSSCG00000010198	BMS1	87	65.916	ENSGMOG00000000718	bms1	96	64.384	Gadus_morhua
ENSSSCG00000010198	BMS1	99	73.012	ENSGALG00000002624	BMS1	99	73.328	Gallus_gallus
ENSSSCG00000010198	BMS1	99	58.921	ENSGACG00000015334	bms1	89	66.506	Gasterosteus_aculeatus
ENSSSCG00000010198	BMS1	99	74.422	ENSGAGG00000003467	BMS1	99	73.789	Gopherus_agassizii
ENSSSCG00000010198	BMS1	86	68.612	ENSHBUG00000022628	bms1	99	62.085	Haplochromis_burtoni
ENSSSCG00000010198	BMS1	99	86.172	ENSHGLG00000000477	BMS1	99	84.531	Heterocephalus_glaber_female
ENSSSCG00000010198	BMS1	99	86.250	ENSHGLG00100002176	BMS1	99	84.609	Heterocephalus_glaber_male
ENSSSCG00000010198	BMS1	89	68.130	ENSHCOG00000017604	bms1	98	67.442	Hippocampus_comes
ENSSSCG00000010198	BMS1	99	62.187	ENSIPUG00000017855	bms1	94	73.649	Ictalurus_punctatus
ENSSSCG00000010198	BMS1	99	88.906	ENSSTOG00000015063	BMS1	99	87.978	Ictidomys_tridecemlineatus
ENSSSCG00000010198	BMS1	99	87.354	ENSJJAG00000017328	Bms1	99	86.328	Jaculus_jaculus
ENSSSCG00000010198	BMS1	58	67.041	ENSKMAG00000021982	bms1	93	67.836	Kryptolebias_marmoratus
ENSSSCG00000010198	BMS1	82	71.625	ENSLBEG00000028208	bms1	97	66.463	Labrus_bergylta
ENSSSCG00000010198	BMS1	99	61.806	ENSLACG00000001600	BMS1	100	62.346	Latimeria_chalumnae
ENSSSCG00000010198	BMS1	84	74.831	ENSLOCG00000012914	bms1	99	63.129	Lepisosteus_oculatus
ENSSSCG00000010198	BMS1	99	89.097	ENSLAFG00000006250	BMS1	99	89.019	Loxodonta_africana
ENSSSCG00000010198	BMS1	84	88.665	ENSMFAG00000037771	BMS1	97	91.103	Macaca_fascicularis
ENSSSCG00000010198	BMS1	93	76.354	ENSMMUG00000007426	-	99	75.838	Macaca_mulatta
ENSSSCG00000010198	BMS1	87	71.625	ENSMLEG00000029084	-	97	70.799	Mandrillus_leucophaeus
ENSSSCG00000010198	BMS1	99	59.722	ENSMAMG00000020855	bms1	90	70.429	Mastacembelus_armatus
ENSSSCG00000010198	BMS1	87	68.008	ENSMZEG00005005663	bms1	99	62.239	Maylandia_zebra
ENSSSCG00000010198	BMS1	95	72.888	ENSMGAG00000001170	BMS1	99	73.006	Meleagris_gallopavo
ENSSSCG00000010198	BMS1	99	86.003	ENSMAUG00000002195	Bms1	99	86.003	Mesocricetus_auratus
ENSSSCG00000010198	BMS1	99	89.977	ENSMICG00000009977	BMS1	99	89.433	Microcebus_murinus
ENSSSCG00000010198	BMS1	99	85.413	ENSMOCG00000002038	Bms1	99	85.569	Microtus_ochrogaster
ENSSSCG00000010198	BMS1	86	68.323	ENSMMOG00000000977	bms1	98	66.603	Mola_mola
ENSSSCG00000010198	BMS1	99	79.511	ENSMODG00000001177	BMS1	99	78.806	Monodelphis_domestica
ENSSSCG00000010198	BMS1	99	61.072	ENSMALG00000009680	bms1	99	60.154	Monopterus_albus
ENSSSCG00000010198	BMS1	76	95.388	MGP_CAROLIEiJ_G0028785	-	86	95.388	Mus_caroli
ENSSSCG00000010198	BMS1	99	85.202	ENSMUSG00000030138	Bms1	99	85.202	Mus_musculus
ENSSSCG00000010198	BMS1	99	85.491	MGP_PahariEiJ_G0022539	Bms1	99	85.413	Mus_pahari
ENSSSCG00000010198	BMS1	99	85.125	MGP_SPRETEiJ_G0029816	Bms1	99	85.047	Mus_spretus
ENSSSCG00000010198	BMS1	99	91.757	ENSMPUG00000017276	BMS1	99	91.835	Mustela_putorius_furo
ENSSSCG00000010198	BMS1	99	90.973	ENSMLUG00000003260	BMS1	99	90.428	Myotis_lucifugus
ENSSSCG00000010198	BMS1	95	82.528	ENSNGAG00000015258	Bms1	99	82.472	Nannospalax_galili
ENSSSCG00000010198	BMS1	99	88.629	ENSNLEG00000015791	BMS1	99	88.396	Nomascus_leucogenys
ENSSSCG00000010198	BMS1	80	96.190	ENSOPRG00000005195	BMS1	81	96.190	Ochotona_princeps
ENSSSCG00000010198	BMS1	99	86.105	ENSODEG00000005554	BMS1	99	85.625	Octodon_degus
ENSSSCG00000010198	BMS1	89	68.489	ENSONIG00000007227	bms1	99	61.598	Oreochromis_niloticus
ENSSSCG00000010198	BMS1	99	78.028	ENSOANG00000000662	-	99	77.838	Ornithorhynchus_anatinus
ENSSSCG00000010198	BMS1	99	88.456	ENSOCUG00000005354	BMS1	99	87.363	Oryctolagus_cuniculus
ENSSSCG00000010198	BMS1	87	70.016	ENSORLG00000014655	bms1	99	67.311	Oryzias_latipes
ENSSSCG00000010198	BMS1	87	69.544	ENSORLG00020016246	bms1	92	68.555	Oryzias_latipes_hni
ENSSSCG00000010198	BMS1	87	70.081	ENSORLG00015014183	bms1	88	67.505	Oryzias_latipes_hsok
ENSSSCG00000010198	BMS1	87	70.048	ENSOMEG00000015042	bms1	97	69.080	Oryzias_melastigma
ENSSSCG00000010198	BMS1	99	90.613	ENSOGAG00000006511	BMS1	99	90.303	Otolemur_garnettii
ENSSSCG00000010198	BMS1	99	93.944	ENSOARG00000003900	BMS1	99	93.556	Ovis_aries
ENSSSCG00000010198	BMS1	99	85.903	ENSPPAG00000027837	BMS1	99	85.748	Pan_paniscus
ENSSSCG00000010198	BMS1	99	92.146	ENSPPRG00000001311	BMS1	99	91.213	Panthera_pardus
ENSSSCG00000010198	BMS1	99	90.506	ENSPTIG00000009652	BMS1	99	89.650	Panthera_tigris_altaica
ENSSSCG00000010198	BMS1	99	89.634	ENSPTRG00000002441	BMS1	99	89.478	Pan_troglodytes
ENSSSCG00000010198	BMS1	99	72.936	ENSPSIG00000006481	BMS1	99	73.115	Pelodiscus_sinensis
ENSSSCG00000010198	BMS1	99	79.735	ENSPEMG00000022467	Bms1	99	78.956	Peromyscus_maniculatus_bairdii
ENSSSCG00000010198	BMS1	95	93.960	ENSPCIG00000001339	BMS1	98	86.798	Phascolarctos_cinereus
ENSSSCG00000010198	BMS1	79	75.123	ENSPFOG00000015180	bms1	98	65.846	Poecilia_formosa
ENSSSCG00000010198	BMS1	79	75.369	ENSPMEG00000023176	bms1	94	65.844	Poecilia_mexicana
ENSSSCG00000010198	BMS1	79	74.572	ENSPREG00000002695	bms1	97	65.951	Poecilia_reticulata
ENSSSCG00000010198	BMS1	63	85.897	ENSPPYG00000002836	-	99	86.410	Pongo_abelii
ENSSSCG00000010198	BMS1	73	95.238	ENSPCAG00000014528	BMS1	73	95.238	Procavia_capensis
ENSSSCG00000010198	BMS1	95	85.287	ENSPCOG00000023834	-	99	85.057	Propithecus_coquereli
ENSSSCG00000010198	BMS1	99	88.941	ENSPVAG00000000725	BMS1	99	87.685	Pteropus_vampyrus
ENSSSCG00000010198	BMS1	85	82.514	ENSRNOG00000006576	Bms1	100	82.526	Rattus_norvegicus
ENSSSCG00000010198	BMS1	99	87.900	ENSRROG00000040101	BMS1	99	87.695	Rhinopithecus_roxellana
ENSSSCG00000010198	BMS1	74	45.962	YPL217C	-	82	46.398	Saccharomyces_cerevisiae
ENSSSCG00000010198	BMS1	99	89.174	ENSSBOG00000035778	BMS1	99	88.941	Saimiri_boliviensis_boliviensis
ENSSSCG00000010198	BMS1	99	79.556	ENSSHAG00000005062	BMS1	99	78.484	Sarcophilus_harrisii
ENSSSCG00000010198	BMS1	99	62.992	ENSSFOG00015022313	bms1	99	61.868	Scleropages_formosus
ENSSSCG00000010198	BMS1	89	68.006	ENSSMAG00000019966	bms1	53	66.465	Scophthalmus_maximus
ENSSSCG00000010198	BMS1	72	80.357	ENSSARG00000014407	BMS1	100	79.353	Sorex_araneus
ENSSSCG00000010198	BMS1	99	73.451	ENSSPUG00000014454	BMS1	99	73.180	Sphenodon_punctatus
ENSSSCG00000010198	BMS1	99	71.407	ENSTGUG00000006302	-	99	71.603	Taeniopygia_guttata
ENSSSCG00000010198	BMS1	90	65.447	ENSTRUG00000008028	bms1	97	65.497	Takifugu_rubripes
ENSSSCG00000010198	BMS1	99	59.248	ENSTNIG00000006216	bms1	83	70.938	Tetraodon_nigroviridis
ENSSSCG00000010198	BMS1	60	93.197	ENSTBEG00000001673	-	64	92.969	Tupaia_belangeri
ENSSSCG00000010198	BMS1	99	92.362	ENSTTRG00000007983	BMS1	99	91.342	Tursiops_truncatus
ENSSSCG00000010198	BMS1	99	91.907	ENSUAMG00000023996	BMS1	99	92.218	Ursus_americanus
ENSSSCG00000010198	BMS1	99	91.829	ENSUMAG00000016523	BMS1	99	92.140	Ursus_maritimus
ENSSSCG00000010198	BMS1	88	88.996	ENSVPAG00000007477	BMS1	94	96.137	Vicugna_pacos
ENSSSCG00000010198	BMS1	99	91.991	ENSVVUG00000021305	BMS1	99	91.757	Vulpes_vulpes
ENSSSCG00000010198	BMS1	98	66.011	ENSXETG00000008158	bms1	99	66.512	Xenopus_tropicalis
ENSSSCG00000010198	BMS1	85	67.708	ENSXCOG00000000506	bms1	96	76.341	Xiphophorus_couchianus
ENSSSCG00000010198	BMS1	85	67.857	ENSXMAG00000014236	bms1	98	66.920	Xiphophorus_maculatus