EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000010203 (Gene tree)
Gene ID: 100155475
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 21233 bases
Position: chr14:61646718-61667950
Accession: 100155475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000010879	zf-RNPHF	PF08080.12	2.4e-22	1	1
ENSSSCP00000033744	zf-RNPHF	PF08080.12	2.4e-22	1	1
ENSSSCP00000034875	zf-RNPHF	PF08080.12	2.4e-22	1	1
ENSSSCP00000037111	zf-RNPHF	PF08080.12	2.4e-22	1	1
ENSSSCP00000037870	zf-RNPHF	PF08080.12	2.4e-22	1	1
ENSSSCP00000042859	zf-RNPHF	PF08080.12	2.4e-22	1	1
ENSSSCP00000040592	zf-RNPHF	PF08080.12	2.6e-22	1	1
ENSSSCP00000040592	RRM_1	PF00076.22	3.6e-28	1	2
ENSSSCP00000040592	RRM_1	PF00076.22	3.6e-28	2	2
ENSSSCP00000010879	RRM_1	PF00076.22	5.3e-28	1	2
ENSSSCP00000010879	RRM_1	PF00076.22	5.3e-28	2	2
ENSSSCP00000033744	RRM_1	PF00076.22	5.3e-28	1	2
ENSSSCP00000033744	RRM_1	PF00076.22	5.3e-28	2	2
ENSSSCP00000034875	RRM_1	PF00076.22	5.3e-28	1	2
ENSSSCP00000034875	RRM_1	PF00076.22	5.3e-28	2	2
ENSSSCP00000037111	RRM_1	PF00076.22	5.3e-28	1	2
ENSSSCP00000037111	RRM_1	PF00076.22	5.3e-28	2	2
ENSSSCP00000037870	RRM_1	PF00076.22	5.3e-28	1	2
ENSSSCP00000037870	RRM_1	PF00076.22	5.3e-28	2	2
ENSSSCP00000042859	RRM_1	PF00076.22	5.3e-28	1	2
ENSSSCP00000042859	RRM_1	PF00076.22	5.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000060825	-	2159	-	ENSSSCP00000040592	382 (aa)	-	A0A287A9H4
ENSSSCT00000048062	-	2162	XM_013983263	ENSSSCP00000034875	414 (aa)	XP_013838717	F1RG16
ENSSSCT00000059531	-	2261	XM_005670999	ENSSSCP00000033744	414 (aa)	XP_005671056	F1RG16
ENSSSCT00000058620	-	2359	XM_021073897	ENSSSCP00000042859	414 (aa)	XP_020929556	F1RG16
ENSSSCT00000044603	-	2205	XM_001929054	ENSSSCP00000037111	414 (aa)	XP_001929089	F1RG16
ENSSSCT00000051627	-	2380	XM_021073892	ENSSSCP00000037870	414 (aa)	XP_020929551	F1RG16
ENSSSCT00000011169	-	2061	XM_005671001	ENSSSCP00000010879	414 (aa)	XP_005671058	F1RG16

Gene Model

Click here to download ENSSSCG00000010203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000010203's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000010203	-	95	41.484	ENSSSCG00000008940	GRSF1	70	41.598
ENSSSCG00000010203	-	55	71.901	ENSSSCG00000010238	HNRNPH3	93	58.104
ENSSSCG00000010203	-	99	80.000	ENSSSCG00000014022	HNRNPH1	96	80.376
ENSSSCG00000010203	-	100	59.277	ENSSSCG00000024956	-	96	59.277
ENSSSCG00000010203	-	97	77.957	ENSSSCG00000033161	HNRNPH2	96	77.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000010203	-	100	97.108	ENSG00000169813	HNRNPF	100	97.959	Homo_sapiens
ENSSSCG00000010203	-	100	99.275	ENSAMEG00000018983	HNRNPF	100	99.275	Ailuropoda_melanoleuca
ENSSSCG00000010203	-	99	82.432	ENSANAG00000033452	-	89	82.432	Aotus_nancymaae
ENSSSCG00000010203	-	100	94.458	ENSANAG00000033285	-	100	94.458	Aotus_nancymaae
ENSSSCG00000010203	-	100	81.579	ENSBTAG00000020513	-	100	81.579	Bos_taurus
ENSSSCG00000010203	-	100	98.792	ENSBTAG00000008853	HNRNPF	100	98.792	Bos_taurus
ENSSSCG00000010203	-	100	97.108	ENSCJAG00000008291	HNRNPF	100	97.108	Callithrix_jacchus
ENSSSCG00000010203	-	100	99.275	ENSCAFG00000007044	HNRNPF	100	99.275	Canis_familiaris
ENSSSCG00000010203	-	100	98.792	ENSCHIG00000006714	HNRNPF	100	98.792	Capra_hircus
ENSSSCG00000010203	-	98	73.775	ENSCHIG00000022971	-	99	73.775	Capra_hircus
ENSSSCG00000010203	-	100	81.731	ENSTSYG00000002112	-	100	81.731	Carlito_syrichta
ENSSSCG00000010203	-	100	95.904	ENSTSYG00000030439	-	100	95.904	Carlito_syrichta
ENSSSCG00000010203	-	99	98.148	ENSCAPG00000011521	HNRNPF	99	98.148	Cavia_aperea
ENSSSCG00000010203	-	99	98.148	ENSCPOG00000003678	HNRNPF	99	98.148	Cavia_porcellus
ENSSSCG00000010203	-	100	96.867	ENSCCAG00000031457	-	100	96.867	Cebus_capucinus
ENSSSCG00000010203	-	100	77.590	ENSCCAG00000028687	-	100	77.590	Cebus_capucinus
ENSSSCG00000010203	-	99	98.148	ENSCLAG00000005161	HNRNPF	99	98.148	Chinchilla_lanigera
ENSSSCG00000010203	-	100	95.663	ENSCANG00000003086	-	100	95.663	Colobus_angolensis_palliatus
ENSSSCG00000010203	-	99	72.296	ENSCGRG00001016206	-	88	72.564	Cricetulus_griseus_chok1gshd
ENSSSCG00000010203	-	100	96.627	ENSCGRG00001016276	Hnrnpf	100	96.627	Cricetulus_griseus_chok1gshd
ENSSSCG00000010203	-	100	94.686	ENSDNOG00000030849	-	100	94.686	Dasypus_novemcinctus
ENSSSCG00000010203	-	100	93.012	ENSDORG00000024936	-	99	94.667	Dipodomys_ordii
ENSSSCG00000010203	-	100	95.904	ENSDORG00000024298	-	100	95.904	Dipodomys_ordii
ENSSSCG00000010203	-	100	89.639	ENSDORG00000008260	-	100	89.639	Dipodomys_ordii
ENSSSCG00000010203	-	100	87.470	ENSDORG00000005431	-	100	87.470	Dipodomys_ordii
ENSSSCG00000010203	-	100	98.551	ENSEASG00005006903	HNRNPF	100	98.551	Equus_asinus_asinus
ENSSSCG00000010203	-	100	94.975	ENSECAG00000003229	HNRNPF	100	94.975	Equus_caballus
ENSSSCG00000010203	-	100	99.275	ENSFCAG00000028219	-	100	99.275	Felis_catus
ENSSSCG00000010203	-	99	98.148	ENSFDAG00000011431	-	99	98.148	Fukomys_damarensis
ENSSSCG00000010203	-	99	97.443	ENSFDAG00000007858	-	87	97.443	Fukomys_damarensis
ENSSSCG00000010203	-	99	79.710	ENSFDAG00000015308	-	99	79.710	Fukomys_damarensis
ENSSSCG00000010203	-	99	98.133	ENSGGOG00000010867	HNRNPF	93	98.133	Gorilla_gorilla
ENSSSCG00000010203	-	98	94.652	ENSHGLG00000014139	-	97	94.652	Heterocephalus_glaber_female
ENSSSCG00000010203	-	98	90.160	ENSHGLG00000017607	-	100	86.957	Heterocephalus_glaber_female
ENSSSCG00000010203	-	99	98.148	ENSHGLG00000000147	-	99	97.585	Heterocephalus_glaber_female
ENSSSCG00000010203	-	100	93.976	ENSHGLG00000010276	-	100	93.976	Heterocephalus_glaber_female
ENSSSCG00000010203	-	98	87.433	ENSHGLG00100010905	-	97	87.433	Heterocephalus_glaber_male
ENSSSCG00000010203	-	99	89.394	ENSHGLG00100019910	-	100	89.394	Heterocephalus_glaber_male
ENSSSCG00000010203	-	99	94.709	ENSHGLG00100019572	-	99	93.720	Heterocephalus_glaber_male
ENSSSCG00000010203	-	99	97.354	ENSHGLG00100020825	-	100	97.030	Heterocephalus_glaber_male
ENSSSCG00000010203	-	98	95.187	ENSHGLG00100019558	-	100	93.237	Heterocephalus_glaber_male
ENSSSCG00000010203	-	100	82.254	ENSSTOG00000023820	-	100	82.254	Ictidomys_tridecemlineatus
ENSSSCG00000010203	-	100	87.500	ENSSTOG00000022853	-	100	87.500	Ictidomys_tridecemlineatus
ENSSSCG00000010203	-	100	97.831	ENSSTOG00000025560	-	100	97.831	Ictidomys_tridecemlineatus
ENSSSCG00000010203	-	100	71.292	ENSJJAG00000000554	-	100	71.292	Jaculus_jaculus
ENSSSCG00000010203	-	100	79.759	ENSJJAG00000022288	-	100	79.759	Jaculus_jaculus
ENSSSCG00000010203	-	100	86.265	ENSJJAG00000017385	-	100	86.265	Jaculus_jaculus
ENSSSCG00000010203	-	100	62.169	ENSJJAG00000014424	-	100	62.169	Jaculus_jaculus
ENSSSCG00000010203	-	98	92.742	ENSJJAG00000014334	-	99	92.742	Jaculus_jaculus
ENSSSCG00000010203	-	99	95.894	ENSLAFG00000000424	HNRNPF	99	95.894	Loxodonta_africana
ENSSSCG00000010203	-	100	97.108	ENSMFAG00000021184	HNRNPF	100	97.108	Macaca_fascicularis
ENSSSCG00000010203	-	100	97.108	ENSMMUG00000020982	HNRNPF	100	97.108	Macaca_mulatta
ENSSSCG00000010203	-	100	97.108	ENSMLEG00000023515	HNRNPF	100	97.108	Mandrillus_leucophaeus
ENSSSCG00000010203	-	100	96.627	ENSMAUG00000007892	Hnrnpf	100	96.627	Mesocricetus_auratus
ENSSSCG00000010203	-	98	81.102	ENSMICG00000044171	-	99	79.810	Microcebus_murinus
ENSSSCG00000010203	-	98	80.749	ENSMICG00000043739	-	99	79.469	Microcebus_murinus
ENSSSCG00000010203	-	100	95.422	ENSMOCG00000014915	Hnrnpf	100	95.422	Microtus_ochrogaster
ENSSSCG00000010203	-	100	96.627	ENSMUSG00000042079	Hnrnpf	100	97.115	Mus_musculus
ENSSSCG00000010203	-	100	95.422	MGP_PahariEiJ_G0026903	-	100	95.422	Mus_pahari
ENSSSCG00000010203	-	99	99.246	ENSMPUG00000017283	HNRNPF	99	99.246	Mustela_putorius_furo
ENSSSCG00000010203	-	100	95.663	ENSMLUG00000007261	HNRNPF	100	95.663	Myotis_lucifugus
ENSSSCG00000010203	-	100	68.675	ENSNGAG00000009482	-	100	68.675	Nannospalax_galili
ENSSSCG00000010203	-	100	78.313	ENSNGAG00000014079	-	100	78.313	Nannospalax_galili
ENSSSCG00000010203	-	100	96.145	ENSNGAG00000010409	-	100	96.145	Nannospalax_galili
ENSSSCG00000010203	-	100	96.627	ENSNLEG00000019098	HNRNPF	100	96.627	Nomascus_leucogenys
ENSSSCG00000010203	-	99	91.005	ENSODEG00000002359	-	99	90.777	Octodon_degus
ENSSSCG00000010203	-	99	98.148	ENSODEG00000019266	-	99	98.148	Octodon_degus
ENSSSCG00000010203	-	100	91.807	ENSOCUG00000024604	-	100	91.807	Oryctolagus_cuniculus
ENSSSCG00000010203	-	100	97.349	ENSOCUG00000024719	-	100	97.349	Oryctolagus_cuniculus
ENSSSCG00000010203	-	100	92.289	ENSOGAG00000030480	-	100	92.289	Otolemur_garnettii
ENSSSCG00000010203	-	99	92.084	ENSOGAG00000013734	-	99	92.084	Otolemur_garnettii
ENSSSCG00000010203	-	100	81.401	ENSOARG00000016658	-	100	81.401	Ovis_aries
ENSSSCG00000010203	-	99	98.638	ENSOARG00000003995	HNRNPF	92	98.638	Ovis_aries
ENSSSCG00000010203	-	100	99.275	ENSPPRG00000021222	HNRNPF	100	99.275	Panthera_pardus
ENSSSCG00000010203	-	100	99.275	ENSPTIG00000009644	HNRNPF	100	99.275	Panthera_tigris_altaica
ENSSSCG00000010203	-	100	97.108	ENSPTRG00000002446	HNRNPF	100	97.108	Pan_troglodytes
ENSSSCG00000010203	-	100	96.867	ENSPANG00000002212	HNRNPF	100	96.867	Papio_anubis
ENSSSCG00000010203	-	100	97.108	ENSPPYG00000002212	HNRNPF	100	97.108	Pongo_abelii
ENSSSCG00000010203	-	100	95.663	ENSPCAG00000013169	HNRNPF	100	95.663	Procavia_capensis
ENSSSCG00000010203	-	100	97.585	ENSPVAG00000011646	HNRNPF	100	97.585	Pteropus_vampyrus
ENSSSCG00000010203	-	100	96.627	ENSRNOG00000014562	Hnrnpf	100	96.627	Rattus_norvegicus
ENSSSCG00000010203	-	100	97.108	ENSRROG00000001235	HNRNPF	100	97.108	Rhinopithecus_roxellana
ENSSSCG00000010203	-	100	97.108	ENSSBOG00000018361	HNRNPF	100	97.108	Saimiri_boliviensis_boliviensis
ENSSSCG00000010203	-	100	98.068	ENSSARG00000010059	HNRNPF	100	98.068	Sorex_araneus
ENSSSCG00000010203	-	99	70.712	ENSTBEG00000016094	HNRNPF	100	70.792	Tupaia_belangeri
ENSSSCG00000010203	-	100	99.275	ENSUAMG00000000455	HNRNPF	100	99.275	Ursus_americanus
ENSSSCG00000010203	-	100	99.275	ENSUMAG00000016485	HNRNPF	100	99.275	Ursus_maritimus
ENSSSCG00000010203	-	100	99.275	ENSVVUG00000021261	HNRNPF	100	99.275	Vulpes_vulpes