EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000010246 (Gene tree)
Gene ID: 100519874
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 41461 bases
Position: chr14:71989533-72030993
Accession: 100519874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000038578	GUCT	PF08152.12	5e-27	1	1
ENSSSCP00000010924	GUCT	PF08152.12	5.6e-27	1	1
ENSSSCP00000038578	ResIII	PF04851.15	3e-10	1	1
ENSSSCP00000010924	ResIII	PF04851.15	3.5e-10	1	1
ENSSSCP00000038578	DEAD	PF00270.29	5.8e-48	1	1
ENSSSCP00000010924	DEAD	PF00270.29	6.4e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000042413	DDX50-202	2321	XM_005657389	ENSSSCP00000038578	684 (aa)	XP_005657446	A0A287A3P8
ENSSSCT00000011216	DDX50-201	2550	XM_003133052	ENSSSCP00000010924	738 (aa)	XP_003133100	F1SUG8

Gene Model

Click here to download ENSSSCG00000010246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000010246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000010246	DDX50	50	32.888	ENSSSCG00000017155	EIF4A3	86	32.888
ENSSSCG00000010246	DDX50	50	32.626	ENSSSCG00000017957	EIF4A1	91	32.440
ENSSSCG00000010246	DDX50	85	64.929	ENSSSCG00000010247	DDX21	76	66.387
ENSSSCG00000010246	DDX50	55	33.333	ENSSSCG00000022915	DDX27	56	33.099
ENSSSCG00000010246	DDX50	50	31.536	ENSSSCG00000011803	EIF4A2	90	30.904
ENSSSCG00000010246	DDX50	55	31.719	ENSSSCG00000033149	DDX47	77	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000010246	DDX50	99	96.336	ENSG00000107625	DDX50	100	96.336	Homo_sapiens
ENSSSCG00000010246	DDX50	99	96.206	ENSAMEG00000017992	DDX50	100	96.206	Ailuropoda_melanoleuca
ENSSSCG00000010246	DDX50	92	76.556	ENSANAG00000017785	-	100	78.133	Aotus_nancymaae
ENSSSCG00000010246	DDX50	99	96.065	ENSBTAG00000033413	DDX50	100	96.065	Bos_taurus
ENSSSCG00000010246	DDX50	99	96.472	ENSCJAG00000018844	DDX50	100	96.472	Callithrix_jacchus
ENSSSCG00000010246	DDX50	99	96.612	ENSCAFG00000013776	DDX50	100	96.612	Canis_familiaris
ENSSSCG00000010246	DDX50	100	96.617	ENSCAFG00020025977	DDX50	100	96.617	Canis_lupus_dingo
ENSSSCG00000010246	DDX50	100	95.664	ENSCHIG00000000285	DDX50	100	95.664	Capra_hircus
ENSSSCG00000010246	DDX50	92	95.870	ENSTSYG00000004192	DDX50	100	95.794	Carlito_syrichta
ENSSSCG00000010246	DDX50	88	77.399	ENSCAPG00000007230	-	97	78.843	Cavia_aperea
ENSSSCG00000010246	DDX50	91	94.807	ENSCPOG00000002131	-	100	94.844	Cavia_porcellus
ENSSSCG00000010246	DDX50	83	86.667	ENSCCAG00000030543	DDX50	100	86.837	Cebus_capucinus
ENSSSCG00000010246	DDX50	99	66.486	ENSCATG00000039259	-	97	71.046	Cercocebus_atys
ENSSSCG00000010246	DDX50	97	70.776	ENSCATG00000035153	-	89	87.774	Cercocebus_atys
ENSSSCG00000010246	DDX50	90	96.988	ENSCATG00000032463	DDX50	99	94.022	Cercocebus_atys
ENSSSCG00000010246	DDX50	92	95.870	ENSCLAG00000012957	-	100	96.065	Chinchilla_lanigera
ENSSSCG00000010246	DDX50	96	69.522	ENSCLAG00000001938	-	96	70.468	Chinchilla_lanigera
ENSSSCG00000010246	DDX50	50	85.366	ENSCLAG00000001553	-	95	85.366	Chinchilla_lanigera
ENSSSCG00000010246	DDX50	99	96.472	ENSCSAG00000007703	DDX50	100	96.472	Chlorocebus_sabaeus
ENSSSCG00000010246	DDX50	88	93.683	ENSCHOG00000000233	DDX50	97	93.683	Choloepus_hoffmanni
ENSSSCG00000010246	DDX50	86	71.406	ENSCANG00000018820	-	88	72.300	Colobus_angolensis_palliatus
ENSSSCG00000010246	DDX50	92	81.711	ENSCANG00000036450	-	100	82.904	Colobus_angolensis_palliatus
ENSSSCG00000010246	DDX50	96	67.552	ENSCANG00000028077	-	91	67.057	Colobus_angolensis_palliatus
ENSSSCG00000010246	DDX50	92	93.953	ENSCGRG00001020223	Ddx50	100	93.758	Cricetulus_griseus_chok1gshd
ENSSSCG00000010246	DDX50	91	94.074	ENSCGRG00000015884	Ddx50	100	93.351	Cricetulus_griseus_crigri
ENSSSCG00000010246	DDX50	87	89.043	ENSDNOG00000001675	DDX50	100	89.043	Dasypus_novemcinctus
ENSSSCG00000010246	DDX50	92	95.280	ENSDORG00000007310	Ddx50	100	95.251	Dipodomys_ordii
ENSSSCG00000010246	DDX50	82	97.201	ENSETEG00000014069	DDX50	90	94.912	Echinops_telfairi
ENSSSCG00000010246	DDX50	100	96.341	ENSEASG00005015595	DDX50	100	96.341	Equus_asinus_asinus
ENSSSCG00000010246	DDX50	100	96.477	ENSECAG00000023044	DDX50	100	96.477	Equus_caballus
ENSSSCG00000010246	DDX50	89	96.552	ENSEEUG00000005782	DDX50	89	96.552	Erinaceus_europaeus
ENSSSCG00000010246	DDX50	100	97.294	ENSFCAG00000012678	DDX50	100	97.294	Felis_catus
ENSSSCG00000010246	DDX50	92	88.201	ENSFDAG00000016109	-	100	88.874	Fukomys_damarensis
ENSSSCG00000010246	DDX50	52	71.615	ENSGGOG00000022568	-	90	77.950	Gorilla_gorilla
ENSSSCG00000010246	DDX50	51	80.159	ENSGGOG00000041063	-	96	79.630	Gorilla_gorilla
ENSSSCG00000010246	DDX50	99	96.336	ENSGGOG00000010100	DDX50	100	96.336	Gorilla_gorilla
ENSSSCG00000010246	DDX50	92	93.953	ENSHGLG00000013466	DDX50	100	94.030	Heterocephalus_glaber_female
ENSSSCG00000010246	DDX50	92	93.953	ENSHGLG00100017191	DDX50	100	94.030	Heterocephalus_glaber_male
ENSSSCG00000010246	DDX50	82	87.234	ENSHGLG00100006568	-	92	87.234	Heterocephalus_glaber_male
ENSSSCG00000010246	DDX50	99	93.767	ENSSTOG00000021852	-	100	93.225	Ictidomys_tridecemlineatus
ENSSSCG00000010246	DDX50	99	72.200	ENSJJAG00000019626	-	100	70.175	Jaculus_jaculus
ENSSSCG00000010246	DDX50	99	93.623	ENSJJAG00000023928	-	100	93.623	Jaculus_jaculus
ENSSSCG00000010246	DDX50	92	95.870	ENSLAFG00000006186	DDX50	100	94.708	Loxodonta_africana
ENSSSCG00000010246	DDX50	97	70.914	ENSMFAG00000045339	-	89	87.461	Macaca_fascicularis
ENSSSCG00000010246	DDX50	99	96.472	ENSMFAG00000044067	DDX50	100	96.472	Macaca_fascicularis
ENSSSCG00000010246	DDX50	88	67.697	ENSMMUG00000045343	-	89	66.718	Macaca_mulatta
ENSSSCG00000010246	DDX50	99	96.472	ENSMMUG00000001006	DDX50	100	97.024	Macaca_mulatta
ENSSSCG00000010246	DDX50	97	71.310	ENSMNEG00000045530	-	89	88.088	Macaca_nemestrina
ENSSSCG00000010246	DDX50	92	89.528	ENSMNEG00000031664	DDX50	100	90.095	Macaca_nemestrina
ENSSSCG00000010246	DDX50	86	82.710	ENSMLEG00000041988	-	89	86.563	Mandrillus_leucophaeus
ENSSSCG00000010246	DDX50	92	94.690	ENSMLEG00000037313	DDX50	100	94.844	Mandrillus_leucophaeus
ENSSSCG00000010246	DDX50	60	92.494	ENSMAUG00000022192	Ddx50	100	92.494	Mesocricetus_auratus
ENSSSCG00000010246	DDX50	99	88.874	ENSMICG00000017539	DDX50	100	88.874	Microcebus_murinus
ENSSSCG00000010246	DDX50	92	93.676	ENSMOCG00000001676	Ddx50	100	93.099	Microtus_ochrogaster
ENSSSCG00000010246	DDX50	92	80.263	ENSMODG00000010741	DDX50	96	78.285	Monodelphis_domestica
ENSSSCG00000010246	DDX50	92	92.920	MGP_CAROLIEiJ_G0015389	Ddx50	100	93.623	Mus_caroli
ENSSSCG00000010246	DDX50	92	93.363	ENSMUSG00000020076	Ddx50	100	93.894	Mus_musculus
ENSSSCG00000010246	DDX50	92	93.510	MGP_PahariEiJ_G0030805	Ddx50	100	94.030	Mus_pahari
ENSSSCG00000010246	DDX50	92	93.363	MGP_SPRETEiJ_G0016200	Ddx50	100	93.894	Mus_spretus
ENSSSCG00000010246	DDX50	88	96.610	ENSMPUG00000004589	DDX50	100	96.610	Mustela_putorius_furo
ENSSSCG00000010246	DDX50	92	94.543	ENSMLUG00000017590	DDX50	100	94.437	Myotis_lucifugus
ENSSSCG00000010246	DDX50	92	94.543	ENSNGAG00000004283	Ddx50	100	94.573	Nannospalax_galili
ENSSSCG00000010246	DDX50	89	66.109	ENSNLEG00000035506	-	88	76.324	Nomascus_leucogenys
ENSSSCG00000010246	DDX50	99	96.336	ENSNLEG00000011631	DDX50	100	96.336	Nomascus_leucogenys
ENSSSCG00000010246	DDX50	92	92.625	ENSOPRG00000001619	DDX50	100	91.045	Ochotona_princeps
ENSSSCG00000010246	DDX50	92	94.395	ENSODEG00000014597	-	100	94.708	Octodon_degus
ENSSSCG00000010246	DDX50	93	67.192	ENSOANG00000004776	DDX50	76	71.859	Ornithorhynchus_anatinus
ENSSSCG00000010246	DDX50	94	93.257	ENSOCUG00000002879	DDX50	100	92.818	Oryctolagus_cuniculus
ENSSSCG00000010246	DDX50	99	96.201	ENSOGAG00000001844	DDX50	100	96.201	Otolemur_garnettii
ENSSSCG00000010246	DDX50	100	95.664	ENSOARG00000005264	DDX50	100	95.664	Ovis_aries
ENSSSCG00000010246	DDX50	92	96.165	ENSPPAG00000040723	DDX50	100	96.201	Pan_paniscus
ENSSSCG00000010246	DDX50	51	71.579	ENSPPAG00000026788	-	89	77.987	Pan_paniscus
ENSSSCG00000010246	DDX50	99	97.290	ENSPPRG00000015826	DDX50	100	97.290	Panthera_pardus
ENSSSCG00000010246	DDX50	99	97.290	ENSPTIG00000008454	DDX50	100	97.290	Panthera_tigris_altaica
ENSSSCG00000010246	DDX50	92	96.165	ENSPTRG00000002562	DDX50	100	96.201	Pan_troglodytes
ENSSSCG00000010246	DDX50	51	71.579	ENSPTRG00000044913	-	89	78.302	Pan_troglodytes
ENSSSCG00000010246	DDX50	92	88.643	ENSPANG00000022143	-	100	89.281	Papio_anubis
ENSSSCG00000010246	DDX50	92	93.658	ENSPEMG00000020899	-	100	91.995	Peromyscus_maniculatus_bairdii
ENSSSCG00000010246	DDX50	91	80.294	ENSPCIG00000016036	DDX50	93	81.402	Phascolarctos_cinereus
ENSSSCG00000010246	DDX50	91	96.875	ENSPPYG00000002390	DDX50	100	96.875	Pongo_abelii
ENSSSCG00000010246	DDX50	75	97.207	ENSPCAG00000009692	DDX50	100	81.494	Procavia_capensis
ENSSSCG00000010246	DDX50	79	84.615	ENSPCOG00000012574	DDX50	90	86.441	Propithecus_coquereli
ENSSSCG00000010246	DDX50	93	94.766	ENSPVAG00000009519	DDX50	86	94.766	Pteropus_vampyrus
ENSSSCG00000010246	DDX50	92	92.920	ENSRNOG00000000396	Ddx50	98	96.524	Rattus_norvegicus
ENSSSCG00000010246	DDX50	99	65.765	ENSRBIG00000039673	-	90	65.051	Rhinopithecus_bieti
ENSSSCG00000010246	DDX50	99	67.121	ENSRBIG00000036573	-	92	75.143	Rhinopithecus_bieti
ENSSSCG00000010246	DDX50	87	94.868	ENSRBIG00000042841	-	98	97.059	Rhinopithecus_bieti
ENSSSCG00000010246	DDX50	99	64.538	ENSRROG00000022853	-	93	71.387	Rhinopithecus_roxellana
ENSSSCG00000010246	DDX50	92	96.313	ENSRROG00000032158	DDX50	100	96.201	Rhinopithecus_roxellana
ENSSSCG00000010246	DDX50	52	69.974	ENSRROG00000031940	-	87	73.231	Rhinopithecus_roxellana
ENSSSCG00000010246	DDX50	91	93.910	ENSSBOG00000014441	DDX50	99	96.354	Saimiri_boliviensis_boliviensis
ENSSSCG00000010246	DDX50	75	70.991	ENSSHAG00000005334	-	85	64.660	Sarcophilus_harrisii
ENSSSCG00000010246	DDX50	88	81.003	ENSSHAG00000005690	DDX50	96	79.053	Sarcophilus_harrisii
ENSSSCG00000010246	DDX50	93	93.939	ENSSARG00000013553	DDX50	88	87.442	Sorex_araneus
ENSSSCG00000010246	DDX50	83	94.118	ENSTBEG00000001085	DDX50	77	93.780	Tupaia_belangeri
ENSSSCG00000010246	DDX50	92	89.823	ENSTTRG00000012408	DDX50	99	90.231	Tursiops_truncatus
ENSSSCG00000010246	DDX50	99	96.477	ENSUAMG00000010976	DDX50	100	96.477	Ursus_americanus
ENSSSCG00000010246	DDX50	100	96.482	ENSUMAG00000007726	DDX50	100	96.482	Ursus_maritimus
ENSSSCG00000010246	DDX50	99	96.201	ENSVPAG00000000626	DDX50	100	96.201	Vicugna_pacos
ENSSSCG00000010246	DDX50	82	91.542	ENSVVUG00000020366	DDX50	98	97.059	Vulpes_vulpes