EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000010327 (Gene tree)
Gene ID: 100156229
Gene Symbol: POLR3A
Alias: RPC1|RPC155|hRPC155
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 61551 bases
Position: chr14:80410147-80471697
Accession: 100156229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000033300	RNA_pol_Rpb1_5	PF04998.17	6.8e-89	1	1
ENSSSCP00000034538	RNA_pol_Rpb1_5	PF04998.17	8.2e-89	1	1
ENSSSCP00000011013	RNA_pol_Rpb1_5	PF04998.17	2.7e-62	1	1
ENSSSCP00000034538	RNA_pol_Rpb1_4	PF05000.17	7.6e-32	1	1
ENSSSCP00000033300	RNA_pol_Rpb1_4	PF05000.17	7.8e-32	1	1
ENSSSCP00000011013	RNA_pol_Rpb1_4	PF05000.17	8.3e-32	1	1
ENSSSCP00000011013	RNA_pol_Rpb1_2	PF00623.20	6.7e-75	1	1
ENSSSCP00000033300	RNA_pol_Rpb1_2	PF00623.20	7.2e-75	1	1
ENSSSCP00000034538	RNA_pol_Rpb1_2	PF00623.20	7.2e-75	1	1
ENSSSCP00000011013	RNA_pol_Rpb1_3	PF04983.18	7.5e-42	1	1
ENSSSCP00000034538	RNA_pol_Rpb1_3	PF04983.18	7.9e-42	1	1
ENSSSCP00000033300	RNA_pol_Rpb1_3	PF04983.18	8.5e-42	1	1
ENSSSCP00000011013	RNA_pol_Rpb1_1	PF04997.12	2e-96	1	1
ENSSSCP00000033300	RNA_pol_Rpb1_1	PF04997.12	2.3e-96	1	1
ENSSSCP00000034538	RNA_pol_Rpb1_1	PF04997.12	4e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000046109	POLR3A-202	6204	XM_001929360	ENSSSCP00000033300	1390 (aa)	XP_001929395	A0A286ZPB2
ENSSSCT00000047864	POLR3A-201	6292	XM_013983365	ENSSSCP00000034538	1402 (aa)	XP_013838819	A0A286ZSI9
ENSSSCT00000011305	POLR3A-203	3876	-	ENSSSCP00000011013	1291 (aa)	-	F1S2E6

Gene Model

Click here to download ENSSSCG00000010327's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03020	RNA polymerase	KEGG
ssc04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000010327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000010327	POLR3A	63	33.333	ENSSSCG00000008226	POLR1A	64	33.333
ENSSSCG00000010327	POLR3A	88	41.667	ENSSSCG00000028278	-	66	38.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000010327	POLR3A	100	98.273	ENSG00000148606	POLR3A	100	98.273	Homo_sapiens
ENSSSCG00000010327	POLR3A	67	86.527	ENSAPOG00000022727	polr3a	99	86.527	Acanthochromis_polyacanthus
ENSSSCG00000010327	POLR3A	100	98.134	ENSAMEG00000017801	POLR3A	100	98.134	Ailuropoda_melanoleuca
ENSSSCG00000010327	POLR3A	94	89.835	ENSACIG00000024504	polr3a	97	90.517	Amphilophus_citrinellus
ENSSSCG00000010327	POLR3A	100	90.426	ENSAOCG00000003949	-	100	87.122	Amphiprion_ocellaris
ENSSSCG00000010327	POLR3A	100	90.432	ENSAOCG00000002071	polr3a	100	90.432	Amphiprion_ocellaris
ENSSSCG00000010327	POLR3A	100	90.426	ENSAPEG00000001966	-	100	90.288	Amphiprion_percula
ENSSSCG00000010327	POLR3A	100	90.432	ENSAPEG00000013351	polr3a	100	90.432	Amphiprion_percula
ENSSSCG00000010327	POLR3A	100	89.928	ENSATEG00000023277	polr3a	100	89.928	Anabas_testudineus
ENSSSCG00000010327	POLR3A	99	96.000	ENSAPLG00000015878	POLR3A	99	96.000	Anas_platyrhynchos
ENSSSCG00000010327	POLR3A	93	94.652	ENSACAG00000007985	POLR3A	99	94.652	Anolis_carolinensis
ENSSSCG00000010327	POLR3A	100	96.809	ENSANAG00000028922	POLR3A	100	95.477	Aotus_nancymaae
ENSSSCG00000010327	POLR3A	95	97.826	ENSACLG00000005914	polr3a	93	97.826	Astatotilapia_calliptera
ENSSSCG00000010327	POLR3A	100	87.266	ENSAMXG00000018852	polr3a	100	87.266	Astyanax_mexicanus
ENSSSCG00000010327	POLR3A	100	98.936	ENSBTAG00000013259	POLR3A	100	98.921	Bos_taurus
ENSSSCG00000010327	POLR3A	99	61.905	WBGene00004411	rpc-1	99	56.797	Caenorhabditis_elegans
ENSSSCG00000010327	POLR3A	100	98.273	ENSCJAG00000001015	POLR3A	100	98.273	Callithrix_jacchus
ENSSSCG00000010327	POLR3A	100	98.417	ENSCAFG00000015546	POLR3A	100	98.417	Canis_familiaris
ENSSSCG00000010327	POLR3A	100	98.417	ENSCAFG00020014711	POLR3A	100	98.417	Canis_lupus_dingo
ENSSSCG00000010327	POLR3A	100	98.345	ENSCHIG00000000352	POLR3A	100	98.345	Capra_hircus
ENSSSCG00000010327	POLR3A	100	97.914	ENSTSYG00000006671	POLR3A	100	97.914	Carlito_syrichta
ENSSSCG00000010327	POLR3A	99	96.873	ENSCAPG00000016031	POLR3A	100	96.873	Cavia_aperea
ENSSSCG00000010327	POLR3A	100	96.906	ENSCPOG00000022387	POLR3A	100	96.906	Cavia_porcellus
ENSSSCG00000010327	POLR3A	100	96.809	ENSCCAG00000032995	POLR3A	100	95.899	Cebus_capucinus
ENSSSCG00000010327	POLR3A	100	98.129	ENSCATG00000035842	POLR3A	100	98.129	Cercocebus_atys
ENSSSCG00000010327	POLR3A	100	96.691	ENSCLAG00000009629	POLR3A	100	96.691	Chinchilla_lanigera
ENSSSCG00000010327	POLR3A	100	98.273	ENSCSAG00000009292	POLR3A	100	98.273	Chlorocebus_sabaeus
ENSSSCG00000010327	POLR3A	92	82.855	ENSCHOG00000008368	POLR3A	95	88.312	Choloepus_hoffmanni
ENSSSCG00000010327	POLR3A	99	95.392	ENSCPBG00000002079	POLR3A	99	95.392	Chrysemys_picta_bellii
ENSSSCG00000010327	POLR3A	99	76.667	ENSCSAVG00000009925	-	93	76.667	Ciona_savignyi
ENSSSCG00000010327	POLR3A	86	97.030	ENSCANG00000041071	POLR3A	100	97.030	Colobus_angolensis_palliatus
ENSSSCG00000010327	POLR3A	78	98.170	ENSCGRG00001015599	-	92	98.170	Cricetulus_griseus_chok1gshd
ENSSSCG00000010327	POLR3A	88	97.654	ENSCGRG00000001019	Polr3a	100	97.654	Cricetulus_griseus_crigri
ENSSSCG00000010327	POLR3A	100	89.712	ENSCSEG00000016653	polr3a	100	89.712	Cynoglossus_semilaevis
ENSSSCG00000010327	POLR3A	100	89.353	ENSCVAG00000023049	polr3a	100	89.353	Cyprinodon_variegatus
ENSSSCG00000010327	POLR3A	99	90.199	ENSDARG00000102569	polr3a	99	90.137	Danio_rerio
ENSSSCG00000010327	POLR3A	100	97.626	ENSDNOG00000010194	POLR3A	100	97.626	Dasypus_novemcinctus
ENSSSCG00000010327	POLR3A	100	98.417	ENSDORG00000000184	Polr3a	100	98.417	Dipodomys_ordii
ENSSSCG00000010327	POLR3A	99	59.140	FBgn0030687	CG17209	99	57.308	Drosophila_melanogaster
ENSSSCG00000010327	POLR3A	88	97.571	ENSETEG00000007477	POLR3A	89	97.571	Echinops_telfairi
ENSSSCG00000010327	POLR3A	64	76.581	ENSEBUG00000013761	polr3a	98	76.581	Eptatretus_burgeri
ENSSSCG00000010327	POLR3A	100	98.936	ENSEASG00005023053	POLR3A	100	98.561	Equus_asinus_asinus
ENSSSCG00000010327	POLR3A	97	98.361	ENSECAG00000019416	POLR3A	100	98.442	Equus_caballus
ENSSSCG00000010327	POLR3A	96	100.000	ENSEEUG00000001774	POLR3A	100	93.289	Erinaceus_europaeus
ENSSSCG00000010327	POLR3A	100	91.489	ENSELUG00000014016	polr3a	100	88.155	Esox_lucius
ENSSSCG00000010327	POLR3A	100	98.705	ENSFCAG00000000843	POLR3A	100	98.705	Felis_catus
ENSSSCG00000010327	POLR3A	100	96.077	ENSFALG00000006913	POLR3A	100	96.077	Ficedula_albicollis
ENSSSCG00000010327	POLR3A	100	96.906	ENSFDAG00000007813	POLR3A	100	96.906	Fukomys_damarensis
ENSSSCG00000010327	POLR3A	95	89.605	ENSFHEG00000011922	polr3a	99	89.605	Fundulus_heteroclitus
ENSSSCG00000010327	POLR3A	100	86.170	ENSGMOG00000000291	polr3a	99	84.876	Gadus_morhua
ENSSSCG00000010327	POLR3A	100	96.148	ENSGALG00000004947	POLR3A	100	96.148	Gallus_gallus
ENSSSCG00000010327	POLR3A	100	89.712	ENSGAFG00000005112	polr3a	100	89.712	Gambusia_affinis
ENSSSCG00000010327	POLR3A	100	89.362	ENSGACG00000002304	polr3a	100	89.281	Gasterosteus_aculeatus
ENSSSCG00000010327	POLR3A	95	100.000	ENSGAGG00000010386	POLR3A	98	95.534	Gopherus_agassizii
ENSSSCG00000010327	POLR3A	99	97.182	ENSGGOG00000027729	POLR3A	100	98.383	Gorilla_gorilla
ENSSSCG00000010327	POLR3A	100	89.568	ENSHBUG00000018098	polr3a	100	89.568	Haplochromis_burtoni
ENSSSCG00000010327	POLR3A	100	96.809	ENSHGLG00000017899	POLR3A	100	96.763	Heterocephalus_glaber_female
ENSSSCG00000010327	POLR3A	100	96.809	ENSHGLG00100008483	POLR3A	100	96.763	Heterocephalus_glaber_male
ENSSSCG00000010327	POLR3A	100	88.993	ENSHCOG00000001075	polr3a	100	88.993	Hippocampus_comes
ENSSSCG00000010327	POLR3A	100	98.129	ENSSTOG00000012983	POLR3A	100	98.129	Ictidomys_tridecemlineatus
ENSSSCG00000010327	POLR3A	100	90.426	ENSKMAG00000015290	polr3a	100	89.712	Kryptolebias_marmoratus
ENSSSCG00000010327	POLR3A	99	88.841	ENSLBEG00000017214	polr3a	99	88.841	Labrus_bergylta
ENSSSCG00000010327	POLR3A	96	100.000	ENSLACG00000018557	POLR3A	92	100.000	Latimeria_chalumnae
ENSSSCG00000010327	POLR3A	100	91.888	ENSLOCG00000004942	polr3a	100	91.888	Lepisosteus_oculatus
ENSSSCG00000010327	POLR3A	100	97.663	ENSLAFG00000016719	POLR3A	100	96.334	Loxodonta_africana
ENSSSCG00000010327	POLR3A	100	98.201	ENSMFAG00000032218	POLR3A	100	98.201	Macaca_fascicularis
ENSSSCG00000010327	POLR3A	100	98.201	ENSMMUG00000005514	POLR3A	100	98.201	Macaca_mulatta
ENSSSCG00000010327	POLR3A	99	91.137	ENSMNEG00000035163	POLR3A	99	98.221	Macaca_nemestrina
ENSSSCG00000010327	POLR3A	100	95.745	ENSMLEG00000030014	POLR3A	98	98.734	Mandrillus_leucophaeus
ENSSSCG00000010327	POLR3A	100	90.426	ENSMAMG00000017497	polr3a	100	89.856	Mastacembelus_armatus
ENSSSCG00000010327	POLR3A	100	89.424	ENSMZEG00005000576	polr3a	100	89.424	Maylandia_zebra
ENSSSCG00000010327	POLR3A	100	89.362	ENSMGAG00000005713	-	93	89.362	Meleagris_gallopavo
ENSSSCG00000010327	POLR3A	100	97.872	ENSMAUG00000016247	Polr3a	100	95.899	Mesocricetus_auratus
ENSSSCG00000010327	POLR3A	100	98.489	ENSMICG00000005937	POLR3A	100	98.784	Microcebus_murinus
ENSSSCG00000010327	POLR3A	100	97.872	ENSMOCG00000012185	Polr3a	100	97.770	Microtus_ochrogaster
ENSSSCG00000010327	POLR3A	100	90.426	ENSMMOG00000013822	polr3a	100	89.065	Mola_mola
ENSSSCG00000010327	POLR3A	100	97.482	ENSMODG00000001036	POLR3A	100	97.482	Monodelphis_domestica
ENSSSCG00000010327	POLR3A	100	89.362	ENSMALG00000001249	polr3a	100	89.353	Monopterus_albus
ENSSSCG00000010327	POLR3A	100	98.058	MGP_CAROLIEiJ_G0019016	Polr3a	100	98.058	Mus_caroli
ENSSSCG00000010327	POLR3A	100	97.914	ENSMUSG00000025280	Polr3a	100	97.914	Mus_musculus
ENSSSCG00000010327	POLR3A	100	97.914	MGP_PahariEiJ_G0030029	Polr3a	100	97.914	Mus_pahari
ENSSSCG00000010327	POLR3A	100	97.872	MGP_SPRETEiJ_G0019894	Polr3a	100	95.468	Mus_spretus
ENSSSCG00000010327	POLR3A	100	98.573	ENSMPUG00000003790	POLR3A	100	98.573	Mustela_putorius_furo
ENSSSCG00000010327	POLR3A	100	98.936	ENSMLUG00000011522	POLR3A	100	97.554	Myotis_lucifugus
ENSSSCG00000010327	POLR3A	100	97.872	ENSNGAG00000015863	Polr3a	100	96.043	Nannospalax_galili
ENSSSCG00000010327	POLR3A	100	89.362	ENSNBRG00000014262	polr3a	100	88.129	Neolamprologus_brichardi
ENSSSCG00000010327	POLR3A	88	92.641	ENSNLEG00000010501	POLR3A	92	92.641	Nomascus_leucogenys
ENSSSCG00000010327	POLR3A	99	90.099	ENSMEUG00000012446	POLR3A	100	84.800	Notamacropus_eugenii
ENSSSCG00000010327	POLR3A	100	96.809	ENSOPRG00000001880	-	100	92.878	Ochotona_princeps
ENSSSCG00000010327	POLR3A	100	96.809	ENSODEG00000015146	POLR3A	100	95.683	Octodon_degus
ENSSSCG00000010327	POLR3A	100	89.856	ENSONIG00000016129	polr3a	100	89.856	Oreochromis_niloticus
ENSSSCG00000010327	POLR3A	99	96.307	ENSOANG00000007013	POLR3A	100	97.151	Ornithorhynchus_anatinus
ENSSSCG00000010327	POLR3A	100	97.872	ENSOCUG00000012450	POLR3A	100	97.554	Oryctolagus_cuniculus
ENSSSCG00000010327	POLR3A	100	89.784	ENSORLG00000008958	polr3a	100	89.784	Oryzias_latipes
ENSSSCG00000010327	POLR3A	96	97.826	ENSORLG00020007525	polr3a	91	97.826	Oryzias_latipes_hni
ENSSSCG00000010327	POLR3A	100	89.640	ENSORLG00015006633	polr3a	100	89.640	Oryzias_latipes_hsok
ENSSSCG00000010327	POLR3A	100	88.705	ENSOMEG00000012865	polr3a	100	88.705	Oryzias_melastigma
ENSSSCG00000010327	POLR3A	100	98.417	ENSOGAG00000010995	POLR3A	100	98.417	Otolemur_garnettii
ENSSSCG00000010327	POLR3A	100	98.348	ENSOARG00000009656	POLR3A	100	98.348	Ovis_aries
ENSSSCG00000010327	POLR3A	50	96.562	ENSPPAG00000041726	-	99	96.562	Pan_paniscus
ENSSSCG00000010327	POLR3A	100	98.705	ENSPPRG00000002128	POLR3A	100	98.705	Panthera_pardus
ENSSSCG00000010327	POLR3A	100	98.705	ENSPTIG00000020916	POLR3A	100	98.705	Panthera_tigris_altaica
ENSSSCG00000010327	POLR3A	100	98.201	ENSPTRG00000002664	POLR3A	100	98.201	Pan_troglodytes
ENSSSCG00000010327	POLR3A	100	98.129	ENSPANG00000022508	POLR3A	100	98.129	Papio_anubis
ENSSSCG00000010327	POLR3A	100	91.489	ENSPKIG00000008140	polr3a	100	91.367	Paramormyrops_kingsleyae
ENSSSCG00000010327	POLR3A	99	94.497	ENSPSIG00000002092	POLR3A	100	95.325	Pelodiscus_sinensis
ENSSSCG00000010327	POLR3A	100	97.914	ENSPEMG00000006768	Polr3a	100	97.914	Peromyscus_maniculatus_bairdii
ENSSSCG00000010327	POLR3A	100	97.482	ENSPCIG00000015842	POLR3A	100	97.482	Phascolarctos_cinereus
ENSSSCG00000010327	POLR3A	54	91.007	ENSPFOG00000006458	polr3a	100	91.007	Poecilia_formosa
ENSSSCG00000010327	POLR3A	100	89.928	ENSPLAG00000000997	polr3a	100	89.928	Poecilia_latipinna
ENSSSCG00000010327	POLR3A	100	89.856	ENSPMEG00000006821	polr3a	100	89.856	Poecilia_mexicana
ENSSSCG00000010327	POLR3A	100	89.640	ENSPREG00000002385	polr3a	100	89.640	Poecilia_reticulata
ENSSSCG00000010327	POLR3A	93	98.067	ENSPPYG00000002305	POLR3A	99	98.067	Pongo_abelii
ENSSSCG00000010327	POLR3A	83	100.000	ENSPCAG00000005690	POLR3A	81	100.000	Procavia_capensis
ENSSSCG00000010327	POLR3A	100	98.273	ENSPCOG00000028311	POLR3A	100	98.273	Propithecus_coquereli
ENSSSCG00000010327	POLR3A	100	97.194	ENSPVAG00000015553	POLR3A	100	97.194	Pteropus_vampyrus
ENSSSCG00000010327	POLR3A	100	89.424	ENSPNYG00000020987	polr3a	100	89.424	Pundamilia_nyererei
ENSSSCG00000010327	POLR3A	99	89.247	ENSPNAG00000006629	polr3a	99	86.105	Pygocentrus_nattereri
ENSSSCG00000010327	POLR3A	100	97.872	ENSRNOG00000010008	Polr3a	100	97.842	Rattus_norvegicus
ENSSSCG00000010327	POLR3A	100	95.745	ENSRBIG00000034967	POLR3A	98	98.734	Rhinopithecus_bieti
ENSSSCG00000010327	POLR3A	100	98.058	ENSRROG00000025527	POLR3A	100	98.058	Rhinopithecus_roxellana
ENSSSCG00000010327	POLR3A	98	50.553	YOR116C	RPO31	99	50.553	Saccharomyces_cerevisiae
ENSSSCG00000010327	POLR3A	100	98.345	ENSSBOG00000022199	POLR3A	100	98.345	Saimiri_boliviensis_boliviensis
ENSSSCG00000010327	POLR3A	100	97.338	ENSSHAG00000007588	POLR3A	94	97.338	Sarcophilus_harrisii
ENSSSCG00000010327	POLR3A	100	91.727	ENSSFOG00015014357	polr3a	100	91.727	Scleropages_formosus
ENSSSCG00000010327	POLR3A	100	89.424	ENSSMAG00000001780	polr3a	100	89.424	Scophthalmus_maximus
ENSSSCG00000010327	POLR3A	100	90.288	ENSSDUG00000019840	polr3a	100	90.288	Seriola_dumerili
ENSSSCG00000010327	POLR3A	100	90.288	ENSSLDG00000023908	polr3a	100	90.288	Seriola_lalandi_dorsalis
ENSSSCG00000010327	POLR3A	69	98.746	ENSSARG00000009916	POLR3A	89	98.746	Sorex_araneus
ENSSSCG00000010327	POLR3A	100	93.525	ENSSPUG00000013209	POLR3A	100	93.525	Sphenodon_punctatus
ENSSSCG00000010327	POLR3A	100	90.426	ENSSPAG00000017712	polr3a	100	90.360	Stegastes_partitus
ENSSSCG00000010327	POLR3A	100	95.847	ENSTGUG00000006423	-	100	95.755	Taeniopygia_guttata
ENSSSCG00000010327	POLR3A	100	89.353	ENSTRUG00000013488	polr3a	100	89.353	Takifugu_rubripes
ENSSSCG00000010327	POLR3A	100	89.511	ENSTNIG00000013151	polr3a	100	89.511	Tetraodon_nigroviridis
ENSSSCG00000010327	POLR3A	71	96.809	ENSTBEG00000015288	POLR3A	75	96.809	Tupaia_belangeri
ENSSSCG00000010327	POLR3A	96	98.555	ENSTTRG00000007817	POLR3A	100	98.555	Tursiops_truncatus
ENSSSCG00000010327	POLR3A	100	97.872	ENSUAMG00000011283	POLR3A	100	96.043	Ursus_americanus
ENSSSCG00000010327	POLR3A	100	98.417	ENSUMAG00000013913	POLR3A	100	98.417	Ursus_maritimus
ENSSSCG00000010327	POLR3A	95	97.849	ENSVPAG00000003285	POLR3A	100	90.327	Vicugna_pacos
ENSSSCG00000010327	POLR3A	100	98.345	ENSVVUG00000025523	POLR3A	100	98.345	Vulpes_vulpes
ENSSSCG00000010327	POLR3A	93	92.648	ENSXETG00000018101	polr3a	100	92.648	Xenopus_tropicalis
ENSSSCG00000010327	POLR3A	100	89.856	ENSXMAG00000015213	polr3a	100	89.856	Xiphophorus_maculatus