EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000010430 (Gene tree)
Gene ID: 100157243
Gene Symbol: CSTF2T
Alias: CstF-64T|DKFZp434C1013|KIAA0689|tauCstF-64
Full Name: cleavage stimulation factor subunit 2 tau variant
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 4587 bases
Position: chr14:98105772-98110358
Accession: 100157243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000011119	RRM_1	PF00076.22	7.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000011415	CSTF2T-201	4587	XM_005671248	ENSSSCP00000011119	615 (aa)	XP_005671305	F1SD01

Gene Model

Click here to download ENSSSCG00000010430's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000010430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000010430	CSTF2T	99	71.040	ENSSSCG00000012486	CSTF2	99	70.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000010430	CSTF2T	100	93.831	ENSG00000177613	CSTF2T	100	93.831	Homo_sapiens
ENSSSCG00000010430	CSTF2T	100	91.707	ENSAMEG00000015766	CSTF2T	100	91.707	Ailuropoda_melanoleuca
ENSSSCG00000010430	CSTF2T	53	85.498	ENSANAG00000027508	-	89	85.542	Aotus_nancymaae
ENSSSCG00000010430	CSTF2T	100	90.312	ENSBTAG00000018406	CSTF2T	100	89.688	Bos_taurus
ENSSSCG00000010430	CSTF2T	53	79.027	ENSCJAG00000039083	-	93	79.027	Callithrix_jacchus
ENSSSCG00000010430	CSTF2T	53	85.498	ENSCJAG00000011554	-	97	84.894	Callithrix_jacchus
ENSSSCG00000010430	CSTF2T	91	100.000	ENSCAFG00000015567	CSTF2T	99	96.429	Canis_familiaris
ENSSSCG00000010430	CSTF2T	100	90.205	ENSCHIG00000016590	CSTF2T	100	90.205	Capra_hircus
ENSSSCG00000010430	CSTF2T	100	92.892	ENSTSYG00000007750	CSTF2T	100	92.892	Carlito_syrichta
ENSSSCG00000010430	CSTF2T	100	88.088	ENSCPOG00000004195	CSTF2T	100	87.618	Cavia_porcellus
ENSSSCG00000010430	CSTF2T	53	84.384	ENSCCAG00000020816	-	88	84.132	Cebus_capucinus
ENSSSCG00000010430	CSTF2T	53	85.285	ENSCATG00000041868	-	95	84.685	Cercocebus_atys
ENSSSCG00000010430	CSTF2T	100	89.671	ENSCLAG00000017916	CSTF2T	100	90.141	Chinchilla_lanigera
ENSSSCG00000010430	CSTF2T	100	94.516	ENSCSAG00000018437	CSTF2T	100	94.194	Chlorocebus_sabaeus
ENSSSCG00000010430	CSTF2T	68	96.212	ENSCHOG00000011888	-	68	96.212	Choloepus_hoffmanni
ENSSSCG00000010430	CSTF2T	53	83.636	ENSCANG00000005843	-	92	83.636	Colobus_angolensis_palliatus
ENSSSCG00000010430	CSTF2T	100	87.207	ENSCGRG00001003222	Cstf2t	100	86.271	Cricetulus_griseus_chok1gshd
ENSSSCG00000010430	CSTF2T	100	88.125	ENSCGRG00000008682	Cstf2t	100	88.125	Cricetulus_griseus_crigri
ENSSSCG00000010430	CSTF2T	100	90.747	ENSDNOG00000003283	CSTF2T	100	90.584	Dasypus_novemcinctus
ENSSSCG00000010430	CSTF2T	82	91.881	ENSDORG00000011245	Cstf2t	100	89.291	Dipodomys_ordii
ENSSSCG00000010430	CSTF2T	100	93.871	ENSEASG00005012929	CSTF2T	100	93.710	Equus_asinus_asinus
ENSSSCG00000010430	CSTF2T	100	93.120	ENSECAG00000004701	CSTF2T	100	92.960	Equus_caballus
ENSSSCG00000010430	CSTF2T	84	90.306	ENSELUG00000004079	-	78	88.265	Esox_lucius
ENSSSCG00000010430	CSTF2T	100	94.472	ENSFCAG00000046300	CSTF2T	100	94.472	Felis_catus
ENSSSCG00000010430	CSTF2T	100	84.806	ENSFDAG00000021170	CSTF2T	100	88.527	Fukomys_damarensis
ENSSSCG00000010430	CSTF2T	100	92.695	ENSGGOG00000036416	-	100	92.208	Gorilla_gorilla
ENSSSCG00000010430	CSTF2T	100	92.695	ENSGGOG00000042388	-	100	92.208	Gorilla_gorilla
ENSSSCG00000010430	CSTF2T	82	88.292	ENSHGLG00000015478	CSTF2T	100	87.790	Heterocephalus_glaber_female
ENSSSCG00000010430	CSTF2T	82	88.292	ENSHGLG00100000336	CSTF2T	100	87.809	Heterocephalus_glaber_male
ENSSSCG00000010430	CSTF2T	100	90.431	ENSSTOG00000026303	CSTF2T	100	90.750	Ictidomys_tridecemlineatus
ENSSSCG00000010430	CSTF2T	100	82.764	ENSLAFG00000002058	CSTF2T	100	85.528	Loxodonta_africana
ENSSSCG00000010430	CSTF2T	52	84.969	ENSMFAG00000042009	-	97	84.356	Macaca_fascicularis
ENSSSCG00000010430	CSTF2T	54	84.731	ENSMMUG00000042906	-	99	84.132	Macaca_mulatta
ENSSSCG00000010430	CSTF2T	52	84.969	ENSMNEG00000031410	-	97	84.356	Macaca_nemestrina
ENSSSCG00000010430	CSTF2T	100	89.155	ENSMAUG00000006359	Cstf2t	100	90.909	Mesocricetus_auratus
ENSSSCG00000010430	CSTF2T	100	90.600	ENSMICG00000000867	-	100	93.109	Microcebus_murinus
ENSSSCG00000010430	CSTF2T	100	84.069	ENSMICG00000030551	-	100	89.448	Microcebus_murinus
ENSSSCG00000010430	CSTF2T	100	87.011	ENSMOCG00000020428	Cstf2t	100	87.637	Microtus_ochrogaster
ENSSSCG00000010430	CSTF2T	80	83.111	ENSMALG00000008842	-	97	54.984	Monopterus_albus
ENSSSCG00000010430	CSTF2T	100	85.895	MGP_CAROLIEiJ_G0022872	Cstf2t	100	89.857	Mus_caroli
ENSSSCG00000010430	CSTF2T	82	90.310	ENSMUSG00000053536	Cstf2t	100	88.438	Mus_musculus
ENSSSCG00000010430	CSTF2T	82	89.484	MGP_PahariEiJ_G0014365	Cstf2t	100	86.244	Mus_pahari
ENSSSCG00000010430	CSTF2T	100	85.469	MGP_SPRETEiJ_G0023790	Cstf2t	100	88.750	Mus_spretus
ENSSSCG00000010430	CSTF2T	100	92.569	ENSMPUG00000020141	CSTF2T	100	92.407	Mustela_putorius_furo
ENSSSCG00000010430	CSTF2T	100	88.941	ENSMLUG00000011187	-	100	88.318	Myotis_lucifugus
ENSSSCG00000010430	CSTF2T	100	84.491	ENSMLUG00000027140	-	100	83.845	Myotis_lucifugus
ENSSSCG00000010430	CSTF2T	100	91.069	ENSNGAG00000003304	Cstf2t	100	91.069	Nannospalax_galili
ENSSSCG00000010430	CSTF2T	100	90.177	ENSNLEG00000012025	CSTF2T	100	90.016	Nomascus_leucogenys
ENSSSCG00000010430	CSTF2T	100	84.038	ENSODEG00000012386	CSTF2T	100	82.629	Octodon_degus
ENSSSCG00000010430	CSTF2T	100	82.927	ENSOCUG00000004647	-	100	82.927	Oryctolagus_cuniculus
ENSSSCG00000010430	CSTF2T	100	93.659	ENSOGAG00000014565	CSTF2T	100	93.333	Otolemur_garnettii
ENSSSCG00000010430	CSTF2T	100	91.284	ENSOARG00000019124	-	100	91.284	Ovis_aries
ENSSSCG00000010430	CSTF2T	100	89.688	ENSOARG00000013688	-	100	90.156	Ovis_aries
ENSSSCG00000010430	CSTF2T	53	84.146	ENSPPAG00000032242	-	96	83.537	Pan_paniscus
ENSSSCG00000010430	CSTF2T	100	94.634	ENSPPRG00000018659	CSTF2T	100	94.146	Panthera_pardus
ENSSSCG00000010430	CSTF2T	100	91.057	ENSPTIG00000021145	CSTF2T	100	92.058	Panthera_tigris_altaica
ENSSSCG00000010430	CSTF2T	53	84.146	ENSPTRG00000043097	-	96	83.537	Pan_troglodytes
ENSSSCG00000010430	CSTF2T	52	84.969	ENSPANG00000029734	-	97	84.356	Papio_anubis
ENSSSCG00000010430	CSTF2T	98	51.794	ENSPFOG00000016756	CSTF2T	94	65.341	Poecilia_formosa
ENSSSCG00000010430	CSTF2T	100	92.800	ENSPPYG00000002441	CSTF2T	100	92.640	Pongo_abelii
ENSSSCG00000010430	CSTF2T	100	91.909	ENSPCAG00000000046	CSTF2T	100	93.042	Procavia_capensis
ENSSSCG00000010430	CSTF2T	99	90.391	ENSPCOG00000010982	CSTF2T	99	92.846	Propithecus_coquereli
ENSSSCG00000010430	CSTF2T	100	93.821	ENSPVAG00000006274	CSTF2T	100	92.846	Pteropus_vampyrus
ENSSSCG00000010430	CSTF2T	100	90.047	ENSRNOG00000050289	Cstf2t	100	90.047	Rattus_norvegicus
ENSSSCG00000010430	CSTF2T	100	93.506	ENSRBIG00000029324	CSTF2T	100	93.506	Rhinopithecus_bieti
ENSSSCG00000010430	CSTF2T	100	93.669	ENSRROG00000042507	CSTF2T	100	93.669	Rhinopithecus_roxellana
ENSSSCG00000010430	CSTF2T	100	93.659	ENSSBOG00000022638	CSTF2T	100	93.496	Saimiri_boliviensis_boliviensis
ENSSSCG00000010430	CSTF2T	83	83.111	ENSSDUG00000001049	-	97	54.777	Seriola_dumerili
ENSSSCG00000010430	CSTF2T	83	83.111	ENSSLDG00000010056	-	97	54.777	Seriola_lalandi_dorsalis
ENSSSCG00000010430	CSTF2T	87	96.063	ENSSARG00000002013	-	87	94.882	Sorex_araneus
ENSSSCG00000010430	CSTF2T	80	82.222	ENSSPAG00000009247	-	96	53.600	Stegastes_partitus
ENSSSCG00000010430	CSTF2T	100	84.065	ENSTBEG00000014379	CSTF2T	100	84.065	Tupaia_belangeri
ENSSSCG00000010430	CSTF2T	100	95.772	ENSTTRG00000003341	CSTF2T	100	95.772	Tursiops_truncatus
ENSSSCG00000010430	CSTF2T	100	90.469	ENSUMAG00000011141	CSTF2T	100	90.469	Ursus_maritimus
ENSSSCG00000010430	CSTF2T	63	96.020	ENSVVUG00000002575	CSTF2T	89	95.652	Vulpes_vulpes