EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000010486 (Gene tree)
Gene ID: 100154547
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid-specific
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 43986 bases
Position: chr14:105922992-105966977
Accession: 100154547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000011175	ResIII	PF04851.15	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000011474	HELLS-201	4641	XM_003359300	ENSSSCP00000011175	837 (aa)	XP_003359348	F1SC64

Gene Model

Click here to download ENSSSCG00000010486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000010486's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000010486	HELLS	64	37.432	ENSSSCG00000009193	SMARCAD1	62	37.432
ENSSSCG00000010486	HELLS	62	48.207	ENSSSCG00000009047	SMARCA5	50	48.207
ENSSSCG00000010486	HELLS	61	43.750	ENSSSCG00000006701	CHD1L	61	39.889
ENSSSCG00000010486	HELLS	64	48.207	ENSSSCG00000012649	SMARCA1	54	48.207
ENSSSCG00000010486	HELLS	53	33.981	ENSSSCG00000006101	-	53	33.981
ENSSSCG00000010486	HELLS	54	35.981	ENSSSCG00000003905	RAD54L	64	35.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000010486	HELLS	100	94.988	ENSG00000119969	HELLS	100	95.798	Homo_sapiens
ENSSSCG00000010486	HELLS	93	65.394	ENSAPOG00000007707	hells	99	63.512	Acanthochromis_polyacanthus
ENSSSCG00000010486	HELLS	100	96.301	ENSAMEG00000013525	HELLS	100	96.301	Ailuropoda_melanoleuca
ENSSSCG00000010486	HELLS	81	67.789	ENSACIG00000018996	hells	99	66.620	Amphilophus_citrinellus
ENSSSCG00000010486	HELLS	96	65.551	ENSAOCG00000006348	hells	97	65.102	Amphiprion_ocellaris
ENSSSCG00000010486	HELLS	96	65.180	ENSAPEG00000001422	hells	97	64.741	Amphiprion_percula
ENSSSCG00000010486	HELLS	97	65.517	ENSATEG00000008107	hells	99	63.636	Anabas_testudineus
ENSSSCG00000010486	HELLS	93	82.166	ENSAPLG00000002649	HELLS	99	81.656	Anas_platyrhynchos
ENSSSCG00000010486	HELLS	86	75.556	ENSACAG00000028785	HELLS	96	75.556	Anolis_carolinensis
ENSSSCG00000010486	HELLS	100	93.070	ENSANAG00000034765	-	100	93.276	Aotus_nancymaae
ENSSSCG00000010486	HELLS	97	63.906	ENSACLG00000007613	hells	99	63.659	Astatotilapia_calliptera
ENSSSCG00000010486	HELLS	82	67.199	ENSAMXG00000002088	hells	99	67.096	Astyanax_mexicanus
ENSSSCG00000010486	HELLS	80	95.827	ENSBTAG00000005979	HELLS	100	95.827	Bos_taurus
ENSSSCG00000010486	HELLS	100	93.070	ENSCJAG00000015819	HELLS	100	93.276	Callithrix_jacchus
ENSSSCG00000010486	HELLS	100	96.186	ENSCAFG00000008090	HELLS	100	96.186	Canis_familiaris
ENSSSCG00000010486	HELLS	94	96.947	ENSCAFG00020004809	HELLS	98	96.947	Canis_lupus_dingo
ENSSSCG00000010486	HELLS	100	92.473	ENSCHIG00000019462	HELLS	100	92.473	Capra_hircus
ENSSSCG00000010486	HELLS	98	92.233	ENSTSYG00000005811	-	99	92.704	Carlito_syrichta
ENSSSCG00000010486	HELLS	100	93.198	ENSCPOG00000003043	HELLS	100	93.198	Cavia_porcellus
ENSSSCG00000010486	HELLS	55	95.376	ENSCCAG00000026761	HELLS	97	95.376	Cebus_capucinus
ENSSSCG00000010486	HELLS	100	89.581	ENSCATG00000033830	HELLS	100	95.372	Cercocebus_atys
ENSSSCG00000010486	HELLS	100	92.959	ENSCLAG00000003938	HELLS	100	93.309	Chinchilla_lanigera
ENSSSCG00000010486	HELLS	85	95.231	ENSCSAG00000006181	HELLS	100	95.231	Chlorocebus_sabaeus
ENSSSCG00000010486	HELLS	85	82.937	ENSCPBG00000025739	HELLS	99	84.786	Chrysemys_picta_bellii
ENSSSCG00000010486	HELLS	100	89.354	ENSCANG00000037736	HELLS	100	95.091	Colobus_angolensis_palliatus
ENSSSCG00000010486	HELLS	100	89.138	ENSCGRG00001017410	Hells	100	89.525	Cricetulus_griseus_chok1gshd
ENSSSCG00000010486	HELLS	96	62.515	ENSCSEG00000016985	hells	99	65.000	Cynoglossus_semilaevis
ENSSSCG00000010486	HELLS	63	62.548	ENSCVAG00000000159	hells	97	62.477	Cyprinodon_variegatus
ENSSSCG00000010486	HELLS	93	66.371	ENSDARG00000057738	hells	97	64.762	Danio_rerio
ENSSSCG00000010486	HELLS	76	94.945	ENSDNOG00000017758	HELLS	100	94.945	Dasypus_novemcinctus
ENSSSCG00000010486	HELLS	100	90.562	ENSDORG00000011812	Hells	100	90.562	Dipodomys_ordii
ENSSSCG00000010486	HELLS	74	52.423	ENSEBUG00000016152	hells	93	52.423	Eptatretus_burgeri
ENSSSCG00000010486	HELLS	100	95.823	ENSEASG00005011764	HELLS	100	95.823	Equus_asinus_asinus
ENSSSCG00000010486	HELLS	100	95.699	ENSECAG00000018810	HELLS	100	95.699	Equus_caballus
ENSSSCG00000010486	HELLS	81	97.826	ENSEEUG00000007680	HELLS	91	97.826	Erinaceus_europaeus
ENSSSCG00000010486	HELLS	94	65.195	ENSELUG00000014909	hells	93	64.488	Esox_lucius
ENSSSCG00000010486	HELLS	85	96.774	ENSFCAG00000005206	HELLS	100	96.774	Felis_catus
ENSSSCG00000010486	HELLS	98	82.095	ENSFALG00000007136	HELLS	99	81.486	Ficedula_albicollis
ENSSSCG00000010486	HELLS	98	92.701	ENSFDAG00000010042	HELLS	100	93.187	Fukomys_damarensis
ENSSSCG00000010486	HELLS	99	62.649	ENSFHEG00000022950	hells	97	64.466	Fundulus_heteroclitus
ENSSSCG00000010486	HELLS	100	76.408	ENSGALG00000005451	HELLS	100	83.095	Gallus_gallus
ENSSSCG00000010486	HELLS	96	63.961	ENSGAFG00000001204	hells	94	63.603	Gambusia_affinis
ENSSSCG00000010486	HELLS	93	64.112	ENSGACG00000003897	hells	91	64.112	Gasterosteus_aculeatus
ENSSSCG00000010486	HELLS	85	82.493	ENSGAGG00000010269	HELLS	100	84.075	Gopherus_agassizii
ENSSSCG00000010486	HELLS	100	90.095	ENSGGOG00000008103	HELLS	100	95.378	Gorilla_gorilla
ENSSSCG00000010486	HELLS	99	63.756	ENSHBUG00000010270	hells	99	63.659	Haplochromis_burtoni
ENSSSCG00000010486	HELLS	72	90.184	ENSHGLG00000006537	-	100	90.184	Heterocephalus_glaber_female
ENSSSCG00000010486	HELLS	98	93.674	ENSHGLG00000011377	-	100	93.674	Heterocephalus_glaber_female
ENSSSCG00000010486	HELLS	98	93.431	ENSHGLG00100017230	-	100	93.431	Heterocephalus_glaber_male
ENSSSCG00000010486	HELLS	87	83.128	ENSHGLG00100001957	-	95	83.128	Heterocephalus_glaber_male
ENSSSCG00000010486	HELLS	84	65.537	ENSHCOG00000001119	hells	96	65.537	Hippocampus_comes
ENSSSCG00000010486	HELLS	99	63.766	ENSIPUG00000002634	HELLS	97	63.766	Ictalurus_punctatus
ENSSSCG00000010486	HELLS	98	94.282	ENSSTOG00000021976	HELLS	100	94.282	Ictidomys_tridecemlineatus
ENSSSCG00000010486	HELLS	100	85.424	ENSJJAG00000000865	Hells	99	86.609	Jaculus_jaculus
ENSSSCG00000010486	HELLS	98	64.806	ENSKMAG00000017279	hells	96	65.291	Kryptolebias_marmoratus
ENSSSCG00000010486	HELLS	99	65.259	ENSLBEG00000027807	hells	96	65.018	Labrus_bergylta
ENSSSCG00000010486	HELLS	98	94.526	ENSLAFG00000007049	HELLS	100	94.526	Loxodonta_africana
ENSSSCG00000010486	HELLS	100	94.504	ENSMFAG00000044053	HELLS	100	94.504	Macaca_fascicularis
ENSSSCG00000010486	HELLS	100	86.636	ENSMMUG00000017255	HELLS	100	95.231	Macaca_mulatta
ENSSSCG00000010486	HELLS	100	89.581	ENSMNEG00000042628	HELLS	100	95.372	Macaca_nemestrina
ENSSSCG00000010486	HELLS	100	94.504	ENSMLEG00000041751	HELLS	100	94.504	Mandrillus_leucophaeus
ENSSSCG00000010486	HELLS	93	64.076	ENSMAMG00000009850	hells	98	66.425	Mastacembelus_armatus
ENSSSCG00000010486	HELLS	97	65.148	ENSMZEG00005018414	hells	99	63.659	Maylandia_zebra
ENSSSCG00000010486	HELLS	95	80.473	ENSMGAG00000006818	HELLS	97	83.636	Meleagris_gallopavo
ENSSSCG00000010486	HELLS	96	88.265	ENSMAUG00000021941	Hells	97	88.582	Mesocricetus_auratus
ENSSSCG00000010486	HELLS	69	93.728	ENSMICG00000046554	-	95	93.728	Microcebus_murinus
ENSSSCG00000010486	HELLS	98	88.794	ENSMOCG00000019342	Hells	100	88.672	Microtus_ochrogaster
ENSSSCG00000010486	HELLS	98	59.443	ENSMMOG00000007950	hells	98	59.758	Mola_mola
ENSSSCG00000010486	HELLS	96	84.826	ENSMODG00000005589	-	51	85.232	Monodelphis_domestica
ENSSSCG00000010486	HELLS	97	61.557	ENSMALG00000010244	hells	94	61.434	Monopterus_albus
ENSSSCG00000010486	HELLS	98	90.378	MGP_CAROLIEiJ_G0022930	Hells	100	90.378	Mus_caroli
ENSSSCG00000010486	HELLS	98	89.890	ENSMUSG00000025001	Hells	100	89.890	Mus_musculus
ENSSSCG00000010486	HELLS	98	91.108	MGP_PahariEiJ_G0014423	Hells	100	91.108	Mus_pahari
ENSSSCG00000010486	HELLS	98	90.378	MGP_SPRETEiJ_G0023848	Hells	100	90.378	Mus_spretus
ENSSSCG00000010486	HELLS	100	95.699	ENSMPUG00000017131	HELLS	100	95.699	Mustela_putorius_furo
ENSSSCG00000010486	HELLS	100	92.115	ENSMLUG00000030511	HELLS	100	92.115	Myotis_lucifugus
ENSSSCG00000010486	HELLS	100	90.215	ENSNGAG00000014049	Hells	100	90.215	Nannospalax_galili
ENSSSCG00000010486	HELLS	97	60.789	ENSNBRG00000024242	hells	99	60.666	Neolamprologus_brichardi
ENSSSCG00000010486	HELLS	100	89.354	ENSNLEG00000012987	HELLS	100	95.231	Nomascus_leucogenys
ENSSSCG00000010486	HELLS	100	89.857	ENSODEG00000015916	HELLS	100	89.857	Octodon_degus
ENSSSCG00000010486	HELLS	97	64.655	ENSONIG00000013166	hells	94	65.148	Oreochromis_niloticus
ENSSSCG00000010486	HELLS	98	84.988	ENSOANG00000005139	HELLS	100	84.988	Ornithorhynchus_anatinus
ENSSSCG00000010486	HELLS	100	93.787	ENSOCUG00000026731	HELLS	100	93.787	Oryctolagus_cuniculus
ENSSSCG00000010486	HELLS	97	63.980	ENSORLG00000000987	hells	97	63.436	Oryzias_latipes
ENSSSCG00000010486	HELLS	97	63.736	ENSORLG00020003952	hells	97	63.558	Oryzias_latipes_hni
ENSSSCG00000010486	HELLS	97	64.347	ENSORLG00015010960	hells	97	62.577	Oryzias_latipes_hsok
ENSSSCG00000010486	HELLS	97	63.614	ENSOMEG00000000135	hells	94	64.347	Oryzias_melastigma
ENSSSCG00000010486	HELLS	99	93.237	ENSOGAG00000017145	HELLS	99	93.237	Otolemur_garnettii
ENSSSCG00000010486	HELLS	100	95.221	ENSOARG00000004495	HELLS	100	95.221	Ovis_aries
ENSSSCG00000010486	HELLS	100	90.215	ENSPPAG00000001726	HELLS	100	95.518	Pan_paniscus
ENSSSCG00000010486	HELLS	85	96.774	ENSPPRG00000005839	HELLS	100	96.774	Panthera_pardus
ENSSSCG00000010486	HELLS	100	95.938	ENSPTIG00000007647	HELLS	100	96.774	Panthera_tigris_altaica
ENSSSCG00000010486	HELLS	100	90.215	ENSPTRG00000002778	HELLS	99	94.707	Pan_troglodytes
ENSSSCG00000010486	HELLS	100	89.581	ENSPANG00000033528	HELLS	100	95.372	Papio_anubis
ENSSSCG00000010486	HELLS	98	63.932	ENSPKIG00000010890	hells	99	62.621	Paramormyrops_kingsleyae
ENSSSCG00000010486	HELLS	94	81.944	ENSPSIG00000005462	HELLS	100	82.071	Pelodiscus_sinensis
ENSSSCG00000010486	HELLS	97	60.049	ENSPMGG00000014690	hells	98	65.939	Periophthalmus_magnuspinnatus
ENSSSCG00000010486	HELLS	100	81.959	ENSPEMG00000017579	Hells	100	83.191	Peromyscus_maniculatus_bairdii
ENSSSCG00000010486	HELLS	97	60.565	ENSPMAG00000004376	hells	98	60.565	Petromyzon_marinus
ENSSSCG00000010486	HELLS	100	84.542	ENSPCIG00000013361	HELLS	100	84.542	Phascolarctos_cinereus
ENSSSCG00000010486	HELLS	97	63.017	ENSPFOG00000001954	hells	94	63.882	Poecilia_formosa
ENSSSCG00000010486	HELLS	99	61.933	ENSPLAG00000006504	hells	97	63.983	Poecilia_latipinna
ENSSSCG00000010486	HELLS	97	63.004	ENSPMEG00000003024	hells	97	64.124	Poecilia_mexicana
ENSSSCG00000010486	HELLS	97	62.899	ENSPREG00000020337	hells	94	63.636	Poecilia_reticulata
ENSSSCG00000010486	HELLS	100	89.706	ENSPPYG00000002502	HELLS	100	89.706	Pongo_abelii
ENSSSCG00000010486	HELLS	100	86.977	ENSPCAG00000013618	HELLS	100	86.977	Procavia_capensis
ENSSSCG00000010486	HELLS	100	90.544	ENSPCOG00000023985	HELLS	99	95.238	Propithecus_coquereli
ENSSSCG00000010486	HELLS	92	97.238	ENSPVAG00000017899	HELLS	92	97.238	Pteropus_vampyrus
ENSSSCG00000010486	HELLS	97	62.624	ENSPNYG00000009100	hells	99	62.500	Pundamilia_nyererei
ENSSSCG00000010486	HELLS	96	63.412	ENSPNAG00000029968	hells	98	62.685	Pygocentrus_nattereri
ENSSSCG00000010486	HELLS	100	90.800	ENSRNOG00000047104	Hells	100	90.800	Rattus_norvegicus
ENSSSCG00000010486	HELLS	100	90.800	ENSRNOG00000047692	LOC100911660	100	91.230	Rattus_norvegicus
ENSSSCG00000010486	HELLS	100	88.396	ENSRBIG00000041080	HELLS	100	93.931	Rhinopithecus_bieti
ENSSSCG00000010486	HELLS	100	89.920	ENSRROG00000040169	HELLS	100	95.091	Rhinopithecus_roxellana
ENSSSCG00000010486	HELLS	97	85.958	ENSSHAG00000014358	HELLS	99	85.958	Sarcophilus_harrisii
ENSSSCG00000010486	HELLS	95	67.127	ENSSFOG00015017895	hells	98	66.381	Scleropages_formosus
ENSSSCG00000010486	HELLS	97	64.409	ENSSMAG00000017423	hells	99	63.041	Scophthalmus_maximus
ENSSSCG00000010486	HELLS	97	65.271	ENSSDUG00000016924	hells	99	63.941	Seriola_dumerili
ENSSSCG00000010486	HELLS	97	63.132	ENSSLDG00000018960	hells	94	63.748	Seriola_lalandi_dorsalis
ENSSSCG00000010486	HELLS	98	79.927	ENSSPUG00000017425	HELLS	100	81.281	Sphenodon_punctatus
ENSSSCG00000010486	HELLS	94	66.035	ENSSPAG00000015579	hells	99	66.423	Stegastes_partitus
ENSSSCG00000010486	HELLS	99	81.643	ENSTGUG00000007157	HELLS	99	81.159	Taeniopygia_guttata
ENSSSCG00000010486	HELLS	93	66.539	ENSTRUG00000000350	hells	97	64.431	Takifugu_rubripes
ENSSSCG00000010486	HELLS	97	55.961	ENSTNIG00000003738	hells	98	57.249	Tetraodon_nigroviridis
ENSSSCG00000010486	HELLS	98	95.377	ENSUAMG00000003343	HELLS	100	95.499	Ursus_americanus
ENSSSCG00000010486	HELLS	99	96.131	ENSUMAG00000004748	HELLS	99	96.215	Ursus_maritimus
ENSSSCG00000010486	HELLS	100	94.982	ENSVPAG00000010115	HELLS	100	94.982	Vicugna_pacos
ENSSSCG00000010486	HELLS	100	96.416	ENSVVUG00000022808	HELLS	100	96.416	Vulpes_vulpes
ENSSSCG00000010486	HELLS	99	61.372	ENSXCOG00000013840	hells	99	61.252	Xiphophorus_couchianus
ENSSSCG00000010486	HELLS	97	63.004	ENSXMAG00000005731	hells	97	64.507	Xiphophorus_maculatus