EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000010685 (Gene tree)
Gene ID: 100158186
Gene Symbol: -
Alias: -
Full Name: TIA1 cytotoxic granule associated RNA binding protein like 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 25940 bases
Position: chr14:129441211-129467150
Accession: 100158186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000011384	RRM_1	PF00076.22	2.8e-60	1	3
ENSSSCP00000011384	RRM_1	PF00076.22	2.8e-60	2	3
ENSSSCP00000011384	RRM_1	PF00076.22	2.8e-60	3	3
ENSSSCP00000033071	RRM_1	PF00076.22	6.8e-51	1	3
ENSSSCP00000033071	RRM_1	PF00076.22	6.8e-51	2	3
ENSSSCP00000033071	RRM_1	PF00076.22	6.8e-51	3	3
ENSSSCP00000049837	RRM_1	PF00076.22	6.8e-51	1	3
ENSSSCP00000049837	RRM_1	PF00076.22	6.8e-51	2	3
ENSSSCP00000049837	RRM_1	PF00076.22	6.8e-51	3	3
ENSSSCP00000045254	RRM_1	PF00076.22	1.3e-29	1	2
ENSSSCP00000045254	RRM_1	PF00076.22	1.3e-29	2	2
ENSSSCP00000048968	RRM_1	PF00076.22	2.3e-29	1	2
ENSSSCP00000048968	RRM_1	PF00076.22	2.3e-29	2	2
ENSSSCP00000055607	RRM_1	PF00076.22	2.3e-29	1	2
ENSSSCP00000055607	RRM_1	PF00076.22	2.3e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000011686	-	6317	XM_001928935	ENSSSCP00000011384	391 (aa)	XP_001928970	F2Z5F9
ENSSSCT00000041191	-	6376	XM_005671505	ENSSSCP00000049837	336 (aa)	XP_005671562	A0A287B101
ENSSSCT00000040327	-	6022	XM_005671506	ENSSSCP00000033071	336 (aa)	XP_005671563	A0A287B101
ENSSSCT00000055569	-	3719	XM_021073454	ENSSSCP00000048968	202 (aa)	XP_020929113	A0A287BGY3
ENSSSCT00000041990	-	6671	XM_021073452	ENSSSCP00000055607	202 (aa)	XP_020929111	A0A287BGY3
ENSSSCT00000064923	-	3237	-	ENSSSCP00000045254	169 (aa)	-	A0A287AMM0

Gene Model

Click here to download ENSSSCG00000010685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000010685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000010685	-	96	85.890	ENSSSCG00000023409	TIA1	90	83.214
ENSSSCG00000010685	-	75	32.203	ENSSSCG00000032167	-	79	34.167
ENSSSCG00000010685	-	75	32.203	ENSSSCG00000036336	-	79	34.167
ENSSSCG00000010685	-	65	31.481	ENSSSCG00000011121	-	61	34.177
ENSSSCG00000010685	-	74	45.098	ENSSSCG00000013427	CIRBP	53	45.098
ENSSSCG00000010685	-	65	37.333	ENSSSCG00000006618	CELF3	63	34.091
ENSSSCG00000010685	-	72	34.615	ENSSSCG00000005130	ELAVL2	93	34.615
ENSSSCG00000010685	-	73	35.897	ENSSSCG00000037291	ELAVL4	87	35.897
ENSSSCG00000010685	-	67	30.769	ENSSSCG00000013592	ELAVL1	95	30.769
ENSSSCG00000010685	-	55	30.392	ENSSSCG00000001928	-	58	30.392
ENSSSCG00000010685	-	80	30.682	ENSSSCG00000007382	PABPC1L	66	30.682
ENSSSCG00000010685	-	95	31.507	ENSSSCG00000003660	-	57	30.220
ENSSSCG00000010685	-	59	35.616	ENSSSCG00000038505	MSI2	51	39.344
ENSSSCG00000010685	-	97	90.909	ENSSSCG00000015620	-	89	87.261
ENSSSCG00000010685	-	79	31.343	ENSSSCG00000026700	RBM23	50	31.624
ENSSSCG00000010685	-	95	32.432	ENSSSCG00000006063	PABPC1	69	31.250
ENSSSCG00000010685	-	73	37.179	ENSSSCG00000013617	ELAVL3	90	37.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000010685	-	100	100.000	ENSG00000151923	TIAL1	100	100.000	Homo_sapiens
ENSSSCG00000010685	-	99	99.104	ENSAMEG00000010147	TIAL1	98	99.219	Ailuropoda_melanoleuca
ENSSSCG00000010685	-	99	98.214	ENSAPLG00000009088	TIAL1	97	97.113	Anas_platyrhynchos
ENSSSCG00000010685	-	99	94.048	ENSACAG00000016986	TIAL1	91	95.845	Anolis_carolinensis
ENSSSCG00000010685	-	100	100.000	ENSANAG00000034445	TIAL1	99	100.000	Aotus_nancymaae
ENSSSCG00000010685	-	100	100.000	ENSBTAG00000004080	TIAL1	99	95.652	Bos_taurus
ENSSSCG00000010685	-	100	100.000	ENSCJAG00000019682	TIAL1	99	100.000	Callithrix_jacchus
ENSSSCG00000010685	-	100	100.000	ENSCAFG00000012171	TIAL1	99	100.000	Canis_familiaris
ENSSSCG00000010685	-	100	100.000	ENSCAFG00020013891	TIAL1	99	95.652	Canis_lupus_dingo
ENSSSCG00000010685	-	100	100.000	ENSCHIG00000020810	TIAL1	99	97.698	Capra_hircus
ENSSSCG00000010685	-	100	100.000	ENSTSYG00000004348	TIAL1	99	100.000	Carlito_syrichta
ENSSSCG00000010685	-	100	90.537	ENSCCAG00000002561	TIAL1	94	100.000	Cebus_capucinus
ENSSSCG00000010685	-	100	94.940	ENSCCAG00000027590	-	100	94.118	Cebus_capucinus
ENSSSCG00000010685	-	100	100.000	ENSCATG00000043838	TIAL1	100	100.000	Cercocebus_atys
ENSSSCG00000010685	-	100	99.744	ENSCLAG00000001273	TIAL1	100	99.738	Chinchilla_lanigera
ENSSSCG00000010685	-	100	100.000	ENSCSAG00000004734	TIAL1	99	95.652	Chlorocebus_sabaeus
ENSSSCG00000010685	-	94	90.635	ENSCHOG00000009888	TIAL1	100	79.528	Choloepus_hoffmanni
ENSSSCG00000010685	-	99	99.390	ENSCPBG00000001103	TIAL1	100	96.931	Chrysemys_picta_bellii
ENSSSCG00000010685	-	100	100.000	ENSCANG00000017395	TIAL1	100	100.000	Colobus_angolensis_palliatus
ENSSSCG00000010685	-	100	99.107	ENSCGRG00001012762	Tial1	99	94.885	Cricetulus_griseus_chok1gshd
ENSSSCG00000010685	-	99	99.390	ENSCGRG00000017323	Tial1	100	99.213	Cricetulus_griseus_crigri
ENSSSCG00000010685	-	98	100.000	ENSDNOG00000009552	TIAL1	100	100.000	Dasypus_novemcinctus
ENSSSCG00000010685	-	100	100.000	ENSDORG00000010683	Tial1	99	100.000	Dipodomys_ordii
ENSSSCG00000010685	-	99	97.910	ENSETEG00000020276	TIAL1	100	98.950	Echinops_telfairi
ENSSSCG00000010685	-	100	100.000	ENSEASG00005014449	TIAL1	99	100.000	Equus_asinus_asinus
ENSSSCG00000010685	-	100	100.000	ENSECAG00000009970	TIAL1	100	100.000	Equus_caballus
ENSSSCG00000010685	-	99	98.806	ENSEEUG00000011861	TIAL1	100	98.688	Erinaceus_europaeus
ENSSSCG00000010685	-	100	100.000	ENSFCAG00000031690	TIAL1	100	100.000	Felis_catus
ENSSSCG00000010685	-	100	99.702	ENSFDAG00000003933	TIAL1	100	99.590	Fukomys_damarensis
ENSSSCG00000010685	-	99	98.214	ENSGALG00000009427	TIAL1	100	92.839	Gallus_gallus
ENSSSCG00000010685	-	100	97.187	ENSGAGG00000023119	TIAL1	100	97.187	Gopherus_agassizii
ENSSSCG00000010685	-	100	100.000	ENSGGOG00000001816	TIAL1	100	100.000	Gorilla_gorilla
ENSSSCG00000010685	-	97	76.829	ENSHGLG00000009491	-	95	74.934	Heterocephalus_glaber_female
ENSSSCG00000010685	-	100	91.304	ENSHGLG00000013775	-	99	91.304	Heterocephalus_glaber_female
ENSSSCG00000010685	-	97	76.829	ENSHGLG00100006330	-	95	74.670	Heterocephalus_glaber_male
ENSSSCG00000010685	-	100	99.405	ENSHGLG00100015062	TIAL1	99	97.692	Heterocephalus_glaber_male
ENSSSCG00000010685	-	100	100.000	ENSSTOG00000025095	TIAL1	100	100.000	Ictidomys_tridecemlineatus
ENSSSCG00000010685	-	99	99.390	ENSJJAG00000005398	-	100	99.475	Jaculus_jaculus
ENSSSCG00000010685	-	97	85.246	ENSJJAG00000022559	-	100	85.246	Jaculus_jaculus
ENSSSCG00000010685	-	99	92.683	ENSLACG00000011749	TIAL1	99	87.724	Latimeria_chalumnae
ENSSSCG00000010685	-	99	99.104	ENSLAFG00000003412	TIAL1	100	100.000	Loxodonta_africana
ENSSSCG00000010685	-	100	100.000	ENSMFAG00000002789	TIAL1	100	100.000	Macaca_fascicularis
ENSSSCG00000010685	-	100	100.000	ENSMMUG00000001472	TIAL1	99	100.000	Macaca_mulatta
ENSSSCG00000010685	-	100	100.000	ENSMNEG00000032245	TIAL1	100	100.000	Macaca_nemestrina
ENSSSCG00000010685	-	100	100.000	ENSMLEG00000034719	TIAL1	100	100.000	Mandrillus_leucophaeus
ENSSSCG00000010685	-	99	93.452	ENSMGAG00000011368	TIAL1	99	93.333	Meleagris_gallopavo
ENSSSCG00000010685	-	76	100.000	ENSMAUG00000008932	-	70	100.000	Mesocricetus_auratus
ENSSSCG00000010685	-	100	100.000	ENSMICG00000037857	TIAL1	100	100.000	Microcebus_murinus
ENSSSCG00000010685	-	100	99.107	ENSMOCG00000014244	Tial1	99	98.698	Microtus_ochrogaster
ENSSSCG00000010685	-	100	97.187	ENSMODG00000008865	TIAL1	99	97.187	Monodelphis_domestica
ENSSSCG00000010685	-	93	85.443	ENSMALG00000007782	TIAL1	100	76.261	Monopterus_albus
ENSSSCG00000010685	-	100	99.233	MGP_CAROLIEiJ_G0030548	Tial1	100	100.000	Mus_caroli
ENSSSCG00000010685	-	100	99.233	ENSMUSG00000030846	Tial1	100	100.000	Mus_musculus
ENSSSCG00000010685	-	100	99.233	MGP_PahariEiJ_G0013755	Tial1	100	100.000	Mus_pahari
ENSSSCG00000010685	-	100	99.233	MGP_SPRETEiJ_G0031662	Tial1	100	100.000	Mus_spretus
ENSSSCG00000010685	-	100	100.000	ENSMPUG00000003060	TIAL1	99	95.652	Mustela_putorius_furo
ENSSSCG00000010685	-	100	100.000	ENSMLUG00000004645	TIAL1	99	94.588	Myotis_lucifugus
ENSSSCG00000010685	-	100	99.702	ENSNGAG00000020427	Tial1	100	99.590	Nannospalax_galili
ENSSSCG00000010685	-	99	100.000	ENSNLEG00000016743	TIAL1	100	100.000	Nomascus_leucogenys
ENSSSCG00000010685	-	99	85.970	ENSMEUG00000013120	TIAL1	99	78.517	Notamacropus_eugenii
ENSSSCG00000010685	-	99	99.744	ENSODEG00000017741	TIAL1	99	99.744	Octodon_degus
ENSSSCG00000010685	-	99	99.390	ENSOANG00000004896	-	98	96.011	Ornithorhynchus_anatinus
ENSSSCG00000010685	-	100	100.000	ENSOCUG00000003783	TIAL1	100	93.350	Oryctolagus_cuniculus
ENSSSCG00000010685	-	96	85.890	ENSOMEG00000016815	TIAL1	98	74.319	Oryzias_melastigma
ENSSSCG00000010685	-	100	100.000	ENSOGAG00000011417	TIAL1	99	100.000	Otolemur_garnettii
ENSSSCG00000010685	-	100	100.000	ENSOARG00000002680	TIAL1	100	100.000	Ovis_aries
ENSSSCG00000010685	-	100	100.000	ENSPPAG00000043098	TIAL1	99	100.000	Pan_paniscus
ENSSSCG00000010685	-	100	100.000	ENSPPRG00000003226	TIAL1	99	100.000	Panthera_pardus
ENSSSCG00000010685	-	100	100.000	ENSPTIG00000007899	TIAL1	99	100.000	Panthera_tigris_altaica
ENSSSCG00000010685	-	100	100.000	ENSPTRG00000002996	TIAL1	100	100.000	Pan_troglodytes
ENSSSCG00000010685	-	100	100.000	ENSPANG00000020518	TIAL1	100	100.000	Papio_anubis
ENSSSCG00000010685	-	100	99.233	ENSPEMG00000014538	Tial1	100	99.107	Peromyscus_maniculatus_bairdii
ENSSSCG00000010685	-	100	97.442	ENSPCIG00000003120	TIAL1	100	97.442	Phascolarctos_cinereus
ENSSSCG00000010685	-	100	99.744	ENSPPYG00000002703	TIAL1	99	100.000	Pongo_abelii
ENSSSCG00000010685	-	100	99.490	ENSPCAG00000003192	TIAL1	99	99.490	Procavia_capensis
ENSSSCG00000010685	-	100	100.000	ENSPCOG00000018990	TIAL1	100	99.107	Propithecus_coquereli
ENSSSCG00000010685	-	100	99.744	ENSPVAG00000017585	TIAL1	99	99.744	Pteropus_vampyrus
ENSSSCG00000010685	-	100	99.233	ENSRNOG00000020271	Tial1	99	99.233	Rattus_norvegicus
ENSSSCG00000010685	-	100	100.000	ENSRBIG00000027702	TIAL1	100	100.000	Rhinopithecus_bieti
ENSSSCG00000010685	-	100	100.000	ENSRROG00000043377	TIAL1	100	100.000	Rhinopithecus_roxellana
ENSSSCG00000010685	-	100	100.000	ENSSBOG00000028408	TIAL1	100	100.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000010685	-	99	98.214	ENSSHAG00000012508	TIAL1	98	96.104	Sarcophilus_harrisii
ENSSSCG00000010685	-	99	99.104	ENSSARG00000012980	TIAL1	100	99.476	Sorex_araneus
ENSSSCG00000010685	-	99	98.780	ENSSPUG00000002412	TIAL1	99	95.908	Sphenodon_punctatus
ENSSSCG00000010685	-	99	98.214	ENSTGUG00000011148	TIAL1	100	97.113	Taeniopygia_guttata
ENSSSCG00000010685	-	97	82.927	ENSTRUG00000020927	TIAL1	99	71.642	Takifugu_rubripes
ENSSSCG00000010685	-	97	82.927	ENSTNIG00000013091	TIAL1	99	66.952	Tetraodon_nigroviridis
ENSSSCG00000010685	-	99	98.806	ENSTTRG00000014574	TIAL1	99	91.560	Tursiops_truncatus
ENSSSCG00000010685	-	100	100.000	ENSUAMG00000009532	TIAL1	100	100.000	Ursus_americanus
ENSSSCG00000010685	-	100	100.000	ENSUMAG00000003207	TIAL1	99	95.652	Ursus_maritimus
ENSSSCG00000010685	-	97	100.000	ENSVPAG00000001240	TIAL1	90	96.190	Vicugna_pacos
ENSSSCG00000010685	-	100	100.000	ENSVVUG00000011029	TIAL1	100	100.000	Vulpes_vulpes
ENSSSCG00000010685	-	97	95.122	ENSXETG00000010234	tial1	91	88.491	Xenopus_tropicalis