EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSSSCG00000011001 (Gene tree)
Gene ID: 387596
Gene Symbol: APTX
Alias: FHA-HIT
Full Name: aprataxin
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 50436 bases
Position: chr10:33445148-33495583
Accession: 387596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000011735	DcpS_C	PF11969.8	2.2e-34	1	1
ENSSSCP00000053859	DcpS_C	PF11969.8	2.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000012043	-	2039	-	ENSSSCP00000011735	342 (aa)	-	F1SE72
ENSSSCT00000037470	-	2192	-	ENSSSCP00000053859	342 (aa)	-	F1SE72

Gene Model

Click here to download ENSSSCG00000011001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011001	APTX	99	91.176	ENSG00000137074	APTX	99	91.176	Homo_sapiens
ENSSSCG00000011001	APTX	99	59.292	ENSAPOG00000008785	aptx	99	59.292	Acanthochromis_polyacanthus
ENSSSCG00000011001	APTX	100	90.936	ENSAMEG00000007648	APTX	96	90.936	Ailuropoda_melanoleuca
ENSSSCG00000011001	APTX	99	56.176	ENSACIG00000002035	aptx	99	56.176	Amphilophus_citrinellus
ENSSSCG00000011001	APTX	99	59.882	ENSAOCG00000000634	aptx	99	59.882	Amphiprion_ocellaris
ENSSSCG00000011001	APTX	99	59.882	ENSAPEG00000017253	aptx	99	59.882	Amphiprion_percula
ENSSSCG00000011001	APTX	99	57.817	ENSATEG00000017383	aptx	99	57.817	Anabas_testudineus
ENSSSCG00000011001	APTX	90	59.317	ENSAPLG00000015645	APTX	100	59.317	Anas_platyrhynchos
ENSSSCG00000011001	APTX	99	62.170	ENSACAG00000003581	APTX	95	62.170	Anolis_carolinensis
ENSSSCG00000011001	APTX	99	90.882	ENSANAG00000030160	APTX	99	88.253	Aotus_nancymaae
ENSSSCG00000011001	APTX	99	59.050	ENSACLG00000018887	aptx	99	59.050	Astatotilapia_calliptera
ENSSSCG00000011001	APTX	98	57.567	ENSAMXG00000039899	aptx	98	57.567	Astyanax_mexicanus
ENSSSCG00000011001	APTX	100	90.643	ENSBTAG00000013947	APTX	99	90.643	Bos_taurus
ENSSSCG00000011001	APTX	99	89.706	ENSCJAG00000007940	APTX	99	89.706	Callithrix_jacchus
ENSSSCG00000011001	APTX	100	90.936	ENSCAFG00000001812	APTX	100	90.936	Canis_familiaris
ENSSSCG00000011001	APTX	100	90.936	ENSCAFG00020015598	APTX	100	90.936	Canis_lupus_dingo
ENSSSCG00000011001	APTX	100	91.228	ENSCHIG00000012896	APTX	100	91.228	Capra_hircus
ENSSSCG00000011001	APTX	100	89.181	ENSTSYG00000003041	APTX	100	89.181	Carlito_syrichta
ENSSSCG00000011001	APTX	61	92.683	ENSCAPG00000013470	APTX	99	92.683	Cavia_aperea
ENSSSCG00000011001	APTX	99	89.118	ENSCPOG00000005975	APTX	99	92.391	Cavia_porcellus
ENSSSCG00000011001	APTX	99	90.000	ENSCCAG00000036783	APTX	99	90.000	Cebus_capucinus
ENSSSCG00000011001	APTX	99	90.588	ENSCATG00000042639	APTX	96	90.588	Cercocebus_atys
ENSSSCG00000011001	APTX	100	87.135	ENSCLAG00000012185	APTX	99	91.304	Chinchilla_lanigera
ENSSSCG00000011001	APTX	99	91.176	ENSCSAG00000009885	APTX	96	91.176	Chlorocebus_sabaeus
ENSSSCG00000011001	APTX	100	64.589	ENSCPBG00000023973	APTX	98	64.326	Chrysemys_picta_bellii
ENSSSCG00000011001	APTX	97	40.669	ENSCING00000008741	-	94	40.669	Ciona_intestinalis
ENSSSCG00000011001	APTX	98	41.226	ENSCSAVG00000008038	-	97	41.226	Ciona_savignyi
ENSSSCG00000011001	APTX	99	89.412	ENSCANG00000037253	APTX	99	89.412	Colobus_angolensis_palliatus
ENSSSCG00000011001	APTX	99	85.882	ENSCGRG00001000705	Aptx	99	90.659	Cricetulus_griseus_chok1gshd
ENSSSCG00000011001	APTX	99	85.882	ENSCGRG00000014159	Aptx	99	90.659	Cricetulus_griseus_crigri
ENSSSCG00000011001	APTX	99	58.580	ENSCSEG00000009549	aptx	99	58.580	Cynoglossus_semilaevis
ENSSSCG00000011001	APTX	99	59.292	ENSCVAG00000011942	aptx	99	59.292	Cyprinodon_variegatus
ENSSSCG00000011001	APTX	99	54.624	ENSDARG00000027143	aptx	99	56.509	Danio_rerio
ENSSSCG00000011001	APTX	100	87.719	ENSDNOG00000018498	APTX	96	87.719	Dasypus_novemcinctus
ENSSSCG00000011001	APTX	100	84.257	ENSDORG00000002139	Aptx	99	90.217	Dipodomys_ordii
ENSSSCG00000011001	APTX	52	40.000	FBgn0038704	CG5316	87	46.721	Drosophila_melanogaster
ENSSSCG00000011001	APTX	82	83.571	ENSETEG00000012459	APTX	79	83.571	Echinops_telfairi
ENSSSCG00000011001	APTX	99	48.468	ENSEBUG00000013914	aptx	95	48.468	Eptatretus_burgeri
ENSSSCG00000011001	APTX	100	88.596	ENSEASG00005004566	APTX	100	88.596	Equus_asinus_asinus
ENSSSCG00000011001	APTX	100	88.596	ENSECAG00000012674	APTX	92	88.596	Equus_caballus
ENSSSCG00000011001	APTX	85	84.247	ENSEEUG00000010693	APTX	95	84.247	Erinaceus_europaeus
ENSSSCG00000011001	APTX	100	90.351	ENSFCAG00000008728	APTX	100	90.351	Felis_catus
ENSSSCG00000011001	APTX	99	63.953	ENSFALG00000001230	APTX	99	63.953	Ficedula_albicollis
ENSSSCG00000011001	APTX	100	84.503	ENSFDAG00000013752	APTX	99	90.761	Fukomys_damarensis
ENSSSCG00000011001	APTX	82	54.639	ENSFHEG00000021328	aptx	73	54.639	Fundulus_heteroclitus
ENSSSCG00000011001	APTX	98	57.101	ENSGMOG00000012505	aptx	98	57.101	Gadus_morhua
ENSSSCG00000011001	APTX	99	60.114	ENSGALG00000001954	APTX	99	60.114	Gallus_gallus
ENSSSCG00000011001	APTX	99	59.238	ENSGAFG00000005086	aptx	99	59.238	Gambusia_affinis
ENSSSCG00000011001	APTX	99	58.529	ENSGACG00000017887	aptx	99	58.529	Gasterosteus_aculeatus
ENSSSCG00000011001	APTX	99	64.306	ENSGAGG00000013230	APTX	99	64.689	Gopherus_agassizii
ENSSSCG00000011001	APTX	85	89.726	ENSGGOG00000014232	APTX	95	83.849	Gorilla_gorilla
ENSSSCG00000011001	APTX	99	59.050	ENSHBUG00000021058	aptx	99	59.050	Haplochromis_burtoni
ENSSSCG00000011001	APTX	100	85.380	ENSHGLG00000015093	APTX	99	89.674	Heterocephalus_glaber_female
ENSSSCG00000011001	APTX	100	86.550	ENSHGLG00100013482	APTX	99	89.674	Heterocephalus_glaber_male
ENSSSCG00000011001	APTX	99	58.754	ENSHCOG00000018216	aptx	95	58.754	Hippocampus_comes
ENSSSCG00000011001	APTX	98	59.292	ENSIPUG00000017548	aptx	99	59.292	Ictalurus_punctatus
ENSSSCG00000011001	APTX	99	86.176	ENSSTOG00000005185	APTX	99	89.674	Ictidomys_tridecemlineatus
ENSSSCG00000011001	APTX	99	81.953	ENSJJAG00000015653	Aptx	99	81.953	Jaculus_jaculus
ENSSSCG00000011001	APTX	99	57.227	ENSKMAG00000000117	aptx	99	57.227	Kryptolebias_marmoratus
ENSSSCG00000011001	APTX	99	52.793	ENSLBEG00000021489	APTX	99	52.793	Labrus_bergylta
ENSSSCG00000011001	APTX	99	58.960	ENSLBEG00000015353	aptx	99	58.960	Labrus_bergylta
ENSSSCG00000011001	APTX	100	59.497	ENSLACG00000003376	APTX	99	60.452	Latimeria_chalumnae
ENSSSCG00000011001	APTX	100	61.159	ENSLOCG00000011556	aptx	96	61.159	Lepisosteus_oculatus
ENSSSCG00000011001	APTX	100	90.351	ENSLAFG00000005665	APTX	99	90.351	Loxodonta_africana
ENSSSCG00000011001	APTX	99	90.882	ENSMFAG00000043141	APTX	96	90.882	Macaca_fascicularis
ENSSSCG00000011001	APTX	99	90.882	ENSMMUG00000007724	APTX	96	90.882	Macaca_mulatta
ENSSSCG00000011001	APTX	99	90.588	ENSMNEG00000042341	APTX	99	90.588	Macaca_nemestrina
ENSSSCG00000011001	APTX	99	90.294	ENSMLEG00000035137	APTX	99	90.294	Mandrillus_leucophaeus
ENSSSCG00000011001	APTX	99	56.047	ENSMAMG00000018377	aptx	99	56.047	Mastacembelus_armatus
ENSSSCG00000011001	APTX	98	59.104	ENSMZEG00005022621	aptx	99	59.104	Maylandia_zebra
ENSSSCG00000011001	APTX	53	72.376	ENSMGAG00000005736	APTX	100	72.376	Meleagris_gallopavo
ENSSSCG00000011001	APTX	99	85.207	ENSMAUG00000006039	Aptx	99	90.110	Mesocricetus_auratus
ENSSSCG00000011001	APTX	99	90.882	ENSMICG00000006603	APTX	97	90.882	Microcebus_murinus
ENSSSCG00000011001	APTX	99	85.503	ENSMOCG00000000869	Aptx	99	90.110	Microtus_ochrogaster
ENSSSCG00000011001	APTX	99	60.237	ENSMMOG00000007028	aptx	99	60.237	Mola_mola
ENSSSCG00000011001	APTX	100	62.857	ENSMODG00000003365	APTX	100	62.857	Monodelphis_domestica
ENSSSCG00000011001	APTX	99	53.687	ENSMALG00000003828	aptx	67	85.714	Monopterus_albus
ENSSSCG00000011001	APTX	80	90.110	MGP_CAROLIEiJ_G0025897	-	99	90.110	Mus_caroli
ENSSSCG00000011001	APTX	99	85.207	ENSMUSG00000028411	Aptx	99	91.209	Mus_musculus
ENSSSCG00000011001	APTX	99	85.207	MGP_PahariEiJ_G0024020	Aptx	99	85.207	Mus_pahari
ENSSSCG00000011001	APTX	99	85.503	MGP_SPRETEiJ_G0026846	Aptx	96	85.503	Mus_spretus
ENSSSCG00000011001	APTX	100	88.889	ENSMPUG00000004290	APTX	100	88.889	Mustela_putorius_furo
ENSSSCG00000011001	APTX	100	90.351	ENSMLUG00000016081	APTX	95	90.351	Myotis_lucifugus
ENSSSCG00000011001	APTX	100	83.918	ENSNGAG00000016314	Aptx	99	89.674	Nannospalax_galili
ENSSSCG00000011001	APTX	99	59.644	ENSNBRG00000014199	aptx	99	59.644	Neolamprologus_brichardi
ENSSSCG00000011001	APTX	99	92.059	ENSNLEG00000032184	APTX	99	92.059	Nomascus_leucogenys
ENSSSCG00000011001	APTX	100	62.428	ENSMEUG00000004153	APTX	99	62.428	Notamacropus_eugenii
ENSSSCG00000011001	APTX	85	83.162	ENSOPRG00000012403	APTX	95	83.162	Ochotona_princeps
ENSSSCG00000011001	APTX	99	69.412	ENSODEG00000000097	-	99	70.588	Octodon_degus
ENSSSCG00000011001	APTX	100	88.304	ENSODEG00000015832	-	99	89.674	Octodon_degus
ENSSSCG00000011001	APTX	99	58.112	ENSONIG00000014541	aptx	83	58.112	Oreochromis_niloticus
ENSSSCG00000011001	APTX	85	61.386	ENSOANG00000009878	APTX	98	61.386	Ornithorhynchus_anatinus
ENSSSCG00000011001	APTX	99	89.645	ENSOCUG00000000738	-	98	89.655	Oryctolagus_cuniculus
ENSSSCG00000011001	APTX	80	92.308	ENSOCUG00000025059	-	91	92.308	Oryctolagus_cuniculus
ENSSSCG00000011001	APTX	99	57.143	ENSORLG00000006237	aptx	99	57.143	Oryzias_latipes
ENSSSCG00000011001	APTX	99	57.726	ENSORLG00020021478	aptx	99	57.726	Oryzias_latipes_hni
ENSSSCG00000011001	APTX	99	56.891	ENSORLG00015021873	aptx	99	56.891	Oryzias_latipes_hsok
ENSSSCG00000011001	APTX	87	56.856	ENSOMEG00000007875	aptx	81	56.856	Oryzias_melastigma
ENSSSCG00000011001	APTX	99	88.529	ENSOGAG00000005388	APTX	96	88.529	Otolemur_garnettii
ENSSSCG00000011001	APTX	100	91.813	ENSOARG00000009598	APTX	96	91.813	Ovis_aries
ENSSSCG00000011001	APTX	99	91.176	ENSPPAG00000030295	APTX	96	91.176	Pan_paniscus
ENSSSCG00000011001	APTX	100	90.643	ENSPPRG00000017524	APTX	100	90.643	Panthera_pardus
ENSSSCG00000011001	APTX	100	90.643	ENSPTIG00000020000	APTX	100	90.643	Panthera_tigris_altaica
ENSSSCG00000011001	APTX	99	91.176	ENSPTRG00000020850	APTX	99	91.176	Pan_troglodytes
ENSSSCG00000011001	APTX	99	90.588	ENSPANG00000025301	APTX	96	90.588	Papio_anubis
ENSSSCG00000011001	APTX	99	59.829	ENSPKIG00000013601	aptx	99	59.829	Paramormyrops_kingsleyae
ENSSSCG00000011001	APTX	100	67.055	ENSPSIG00000010521	APTX	96	67.055	Pelodiscus_sinensis
ENSSSCG00000011001	APTX	97	56.891	ENSPMGG00000018649	aptx	98	56.891	Periophthalmus_magnuspinnatus
ENSSSCG00000011001	APTX	99	85.799	ENSPEMG00000007747	Aptx	99	89.011	Peromyscus_maniculatus_bairdii
ENSSSCG00000011001	APTX	99	47.384	ENSPMAG00000008417	aptx	97	47.384	Petromyzon_marinus
ENSSSCG00000011001	APTX	99	66.379	ENSPCIG00000029852	APTX	99	66.379	Phascolarctos_cinereus
ENSSSCG00000011001	APTX	99	58.772	ENSPFOG00000004992	aptx	99	58.772	Poecilia_formosa
ENSSSCG00000011001	APTX	99	59.064	ENSPFOG00000005131	-	99	59.064	Poecilia_formosa
ENSSSCG00000011001	APTX	99	59.064	ENSPLAG00000007960	APTX	99	59.064	Poecilia_latipinna
ENSSSCG00000011001	APTX	99	59.064	ENSPLAG00000007906	aptx	99	59.064	Poecilia_latipinna
ENSSSCG00000011001	APTX	99	59.064	ENSPMEG00000019789	APTX	99	59.064	Poecilia_mexicana
ENSSSCG00000011001	APTX	99	59.357	ENSPMEG00000018504	aptx	99	59.357	Poecilia_mexicana
ENSSSCG00000011001	APTX	99	54.572	ENSPREG00000004375	aptx	99	54.572	Poecilia_reticulata
ENSSSCG00000011001	APTX	99	92.059	ENSPPYG00000019142	APTX	96	92.059	Pongo_abelii
ENSSSCG00000011001	APTX	100	74.561	ENSPCAG00000010014	APTX	99	74.561	Procavia_capensis
ENSSSCG00000011001	APTX	100	92.398	ENSPCOG00000016780	APTX	100	92.398	Propithecus_coquereli
ENSSSCG00000011001	APTX	100	88.889	ENSPVAG00000011468	APTX	97	88.889	Pteropus_vampyrus
ENSSSCG00000011001	APTX	99	59.050	ENSPNYG00000007675	aptx	99	59.050	Pundamilia_nyererei
ENSSSCG00000011001	APTX	98	56.509	ENSPNAG00000015984	aptx	99	56.509	Pygocentrus_nattereri
ENSSSCG00000011001	APTX	99	81.953	ENSRNOG00000006582	Aptx	99	81.953	Rattus_norvegicus
ENSSSCG00000011001	APTX	99	90.294	ENSRBIG00000042913	APTX	99	90.294	Rhinopithecus_bieti
ENSSSCG00000011001	APTX	99	90.000	ENSRROG00000035395	APTX	99	90.000	Rhinopithecus_roxellana
ENSSSCG00000011001	APTX	99	90.294	ENSSBOG00000025215	APTX	99	90.294	Saimiri_boliviensis_boliviensis
ENSSSCG00000011001	APTX	100	67.544	ENSSHAG00000012205	APTX	96	67.544	Sarcophilus_harrisii
ENSSSCG00000011001	APTX	99	63.068	ENSSFOG00015009267	aptx	99	63.068	Scleropages_formosus
ENSSSCG00000011001	APTX	99	60.059	ENSSMAG00000008839	aptx	99	60.059	Scophthalmus_maximus
ENSSSCG00000011001	APTX	99	59.292	ENSSDUG00000001989	aptx	99	59.292	Seriola_dumerili
ENSSSCG00000011001	APTX	99	59.292	ENSSLDG00000004915	aptx	99	59.292	Seriola_lalandi_dorsalis
ENSSSCG00000011001	APTX	100	64.023	ENSSPUG00000008994	APTX	87	64.023	Sphenodon_punctatus
ENSSSCG00000011001	APTX	99	60.177	ENSSPAG00000020373	aptx	99	60.177	Stegastes_partitus
ENSSSCG00000011001	APTX	100	62.248	ENSTGUG00000001441	APTX	100	62.248	Taeniopygia_guttata
ENSSSCG00000011001	APTX	99	57.692	ENSTRUG00000009794	aptx	99	57.692	Takifugu_rubripes
ENSSSCG00000011001	APTX	99	59.412	ENSTNIG00000010570	aptx	98	59.412	Tetraodon_nigroviridis
ENSSSCG00000011001	APTX	100	84.211	ENSTBEG00000008504	APTX	96	84.211	Tupaia_belangeri
ENSSSCG00000011001	APTX	93	85.849	ENSTTRG00000007384	APTX	96	85.849	Tursiops_truncatus
ENSSSCG00000011001	APTX	100	90.058	ENSUAMG00000003700	APTX	98	90.058	Ursus_americanus
ENSSSCG00000011001	APTX	100	90.058	ENSUMAG00000005837	APTX	100	90.058	Ursus_maritimus
ENSSSCG00000011001	APTX	99	63.636	ENSVPAG00000001297	APTX	99	63.636	Vicugna_pacos
ENSSSCG00000011001	APTX	100	90.936	ENSVVUG00000021130	APTX	100	90.936	Vulpes_vulpes
ENSSSCG00000011001	APTX	99	60.920	ENSXETG00000024143	aptx	99	60.920	Xenopus_tropicalis
ENSSSCG00000011001	APTX	99	57.062	ENSXCOG00000005020	aptx	99	57.062	Xiphophorus_couchianus
ENSSSCG00000011001	APTX	99	58.997	ENSXMAG00000022086	aptx	96	58.997	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process
GO:0120108	DNA-3'-diphospho-5'-guanosine diphosphatase	-	IEA	Function