EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000011134 (Gene tree)
Gene ID: 100515920
Gene Symbol: RBM17
Alias: MGC14439|SPF45
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 23137 bases
Position: chr10:64885870-64909006
Accession: 100515920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000011874	RRM_1	PF00076.22	0.00013	1	1
ENSSSCP00000011874	G-patch	PF01585.23	8.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000012186	RBM17-201	3234	XM_003130822	ENSSSCP00000011874	401 (aa)	XP_003130870	F1RUL1

Gene Model

Click here to download ENSSSCG00000011134's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011134's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011134	RBM17	100	98.753	ENSG00000134453	RBM17	100	98.753	Homo_sapiens
ENSSSCG00000011134	RBM17	99	82.878	ENSAPOG00000007101	rbm17	99	82.878	Acanthochromis_polyacanthus
ENSSSCG00000011134	RBM17	100	99.002	ENSAMEG00000002107	RBM17	100	99.002	Ailuropoda_melanoleuca
ENSSSCG00000011134	RBM17	100	78.922	ENSACIG00000006251	rbm17	100	78.922	Amphilophus_citrinellus
ENSSSCG00000011134	RBM17	100	82.801	ENSAOCG00000014892	rbm17	100	82.801	Amphiprion_ocellaris
ENSSSCG00000011134	RBM17	100	82.801	ENSAPEG00000022779	rbm17	100	82.801	Amphiprion_percula
ENSSSCG00000011134	RBM17	100	79.009	ENSATEG00000004406	rbm17	100	79.009	Anabas_testudineus
ENSSSCG00000011134	RBM17	100	95.771	ENSAPLG00000004190	RBM17	100	95.771	Anas_platyrhynchos
ENSSSCG00000011134	RBM17	89	89.730	ENSACAG00000005418	RBM17	99	90.000	Anolis_carolinensis
ENSSSCG00000011134	RBM17	100	84.328	ENSANAG00000019330	-	97	94.068	Aotus_nancymaae
ENSSSCG00000011134	RBM17	100	98.753	ENSANAG00000030127	RBM17	100	98.753	Aotus_nancymaae
ENSSSCG00000011134	RBM17	100	78.765	ENSACLG00000003928	rbm17	100	78.765	Astatotilapia_calliptera
ENSSSCG00000011134	RBM17	100	76.706	ENSAMXG00000005853	rbm17	100	79.294	Astyanax_mexicanus
ENSSSCG00000011134	RBM17	100	98.254	ENSBTAG00000011094	-	100	98.254	Bos_taurus
ENSSSCG00000011134	RBM17	100	99.751	ENSBTAG00000021951	RBM17	100	99.751	Bos_taurus
ENSSSCG00000011134	RBM17	73	34.783	WBGene00010233	F58B3.7	91	32.898	Caenorhabditis_elegans
ENSSSCG00000011134	RBM17	100	98.753	ENSCJAG00000020573	RBM17	100	98.753	Callithrix_jacchus
ENSSSCG00000011134	RBM17	100	99.002	ENSCAFG00000005206	RBM17	100	99.002	Canis_familiaris
ENSSSCG00000011134	RBM17	100	94.514	ENSCAFG00020005420	RBM17	100	94.514	Canis_lupus_dingo
ENSSSCG00000011134	RBM17	100	97.007	ENSCHIG00000019921	-	100	97.007	Capra_hircus
ENSSSCG00000011134	RBM17	100	99.751	ENSCHIG00000023204	-	100	99.751	Capra_hircus
ENSSSCG00000011134	RBM17	100	96.790	ENSTSYG00000001165	RBM17	100	96.790	Carlito_syrichta
ENSSSCG00000011134	RBM17	96	75.065	ENSCAPG00000006275	RBM17	100	78.415	Cavia_aperea
ENSSSCG00000011134	RBM17	100	93.382	ENSCPOG00000005679	RBM17	100	93.382	Cavia_porcellus
ENSSSCG00000011134	RBM17	100	98.753	ENSCCAG00000018655	RBM17	100	98.753	Cebus_capucinus
ENSSSCG00000011134	RBM17	100	98.753	ENSCATG00000041566	RBM17	100	98.753	Cercocebus_atys
ENSSSCG00000011134	RBM17	100	97.531	ENSCLAG00000012195	RBM17	99	97.531	Chinchilla_lanigera
ENSSSCG00000011134	RBM17	100	98.753	ENSCSAG00000013564	RBM17	100	98.753	Chlorocebus_sabaeus
ENSSSCG00000011134	RBM17	92	79.189	ENSCHOG00000005131	RBM17	100	79.189	Choloepus_hoffmanni
ENSSSCG00000011134	RBM17	100	94.030	ENSCPBG00000019836	RBM17	100	94.030	Chrysemys_picta_bellii
ENSSSCG00000011134	RBM17	100	47.229	ENSCSAVG00000008782	-	100	45.652	Ciona_savignyi
ENSSSCG00000011134	RBM17	98	84.439	ENSCANG00000023715	-	100	84.439	Colobus_angolensis_palliatus
ENSSSCG00000011134	RBM17	100	98.504	ENSCANG00000030987	RBM17	100	98.504	Colobus_angolensis_palliatus
ENSSSCG00000011134	RBM17	100	75.561	ENSCGRG00001009256	-	100	73.580	Cricetulus_griseus_chok1gshd
ENSSSCG00000011134	RBM17	100	97.778	ENSCGRG00001013842	Rbm17	100	97.778	Cricetulus_griseus_chok1gshd
ENSSSCG00000011134	RBM17	100	97.778	ENSCGRG00000006907	Rbm17	100	97.778	Cricetulus_griseus_crigri
ENSSSCG00000011134	RBM17	100	79.064	ENSCSEG00000018164	rbm17	100	79.803	Cynoglossus_semilaevis
ENSSSCG00000011134	RBM17	100	74.257	ENSCVAG00000002476	rbm17	100	75.610	Cyprinodon_variegatus
ENSSSCG00000011134	RBM17	100	77.647	ENSDARG00000031346	rbm17	100	77.647	Danio_rerio
ENSSSCG00000011134	RBM17	100	98.254	ENSDNOG00000035920	RBM17	100	98.254	Dasypus_novemcinctus
ENSSSCG00000011134	RBM17	99	35.982	FBgn0086683	Spf45	99	36.228	Drosophila_melanogaster
ENSSSCG00000011134	RBM17	100	74.813	ENSETEG00000006642	RBM17	100	74.813	Echinops_telfairi
ENSSSCG00000011134	RBM17	63	70.732	ENSEBUG00000010253	rbm17	85	70.732	Eptatretus_burgeri
ENSSSCG00000011134	RBM17	100	92.857	ENSEASG00005019205	-	100	92.857	Equus_asinus_asinus
ENSSSCG00000011134	RBM17	92	96.216	ENSEASG00005009236	-	100	96.216	Equus_asinus_asinus
ENSSSCG00000011134	RBM17	100	83.042	ENSECAG00000008939	RBM17	100	85.786	Equus_caballus
ENSSSCG00000011134	RBM17	100	88.778	ENSECAG00000001379	-	100	88.778	Equus_caballus
ENSSSCG00000011134	RBM17	86	81.395	ENSEEUG00000013077	RBM17	100	81.395	Erinaceus_europaeus
ENSSSCG00000011134	RBM17	100	76.620	ENSELUG00000006440	rbm17	100	76.620	Esox_lucius
ENSSSCG00000011134	RBM17	100	99.002	ENSFCAG00000031988	RBM17	100	99.002	Felis_catus
ENSSSCG00000011134	RBM17	100	94.763	ENSFALG00000001790	RBM17	100	94.763	Ficedula_albicollis
ENSSSCG00000011134	RBM17	100	97.531	ENSFDAG00000007470	RBM17	100	97.531	Fukomys_damarensis
ENSSSCG00000011134	RBM17	100	77.887	ENSFHEG00000001266	rbm17	100	77.531	Fundulus_heteroclitus
ENSSSCG00000011134	RBM17	99	75.059	ENSGMOG00000008438	rbm17	100	75.059	Gadus_morhua
ENSSSCG00000011134	RBM17	100	95.761	ENSGALG00000006332	RBM17	100	95.761	Gallus_gallus
ENSSSCG00000011134	RBM17	100	80.098	ENSGAFG00000019879	rbm17	100	80.835	Gambusia_affinis
ENSSSCG00000011134	RBM17	99	81.034	ENSGACG00000019174	rbm17	99	81.034	Gasterosteus_aculeatus
ENSSSCG00000011134	RBM17	100	94.030	ENSGAGG00000019906	RBM17	100	94.030	Gopherus_agassizii
ENSSSCG00000011134	RBM17	100	83.292	ENSHBUG00000016624	rbm17	100	83.292	Haplochromis_burtoni
ENSSSCG00000011134	RBM17	100	97.531	ENSHGLG00000011580	RBM17	100	97.531	Heterocephalus_glaber_female
ENSSSCG00000011134	RBM17	100	97.531	ENSHGLG00100010460	RBM17	100	97.531	Heterocephalus_glaber_male
ENSSSCG00000011134	RBM17	100	75.062	ENSHGLG00100010556	-	100	73.333	Heterocephalus_glaber_male
ENSSSCG00000011134	RBM17	99	77.566	ENSHCOG00000010865	rbm17	100	77.566	Hippocampus_comes
ENSSSCG00000011134	RBM17	100	77.283	ENSIPUG00000007699	Rbm17	100	77.283	Ictalurus_punctatus
ENSSSCG00000011134	RBM17	100	98.025	ENSSTOG00000013591	RBM17	100	98.025	Ictidomys_tridecemlineatus
ENSSSCG00000011134	RBM17	100	97.778	ENSJJAG00000022886	Rbm17	100	97.778	Jaculus_jaculus
ENSSSCG00000011134	RBM17	100	73.067	ENSJJAG00000000993	-	100	69.727	Jaculus_jaculus
ENSSSCG00000011134	RBM17	100	78.378	ENSKMAG00000021400	rbm17	100	79.115	Kryptolebias_marmoratus
ENSSSCG00000011134	RBM17	100	81.818	ENSLBEG00000000881	rbm17	100	78.538	Labrus_bergylta
ENSSSCG00000011134	RBM17	99	68.941	ENSLACG00000017297	RBM17	99	68.941	Latimeria_chalumnae
ENSSSCG00000011134	RBM17	100	86.667	ENSLOCG00000015659	rbm17	100	86.667	Lepisosteus_oculatus
ENSSSCG00000011134	RBM17	100	97.297	ENSLAFG00000011629	RBM17	100	97.297	Loxodonta_africana
ENSSSCG00000011134	RBM17	100	98.753	ENSMFAG00000035521	RBM17	100	98.753	Macaca_fascicularis
ENSSSCG00000011134	RBM17	100	98.753	ENSMMUG00000015152	RBM17	100	98.753	Macaca_mulatta
ENSSSCG00000011134	RBM17	100	98.753	ENSMNEG00000017264	RBM17	100	98.753	Macaca_nemestrina
ENSSSCG00000011134	RBM17	100	98.753	ENSMLEG00000029340	RBM17	100	98.753	Mandrillus_leucophaeus
ENSSSCG00000011134	RBM17	100	78.538	ENSMAMG00000000387	rbm17	100	78.538	Mastacembelus_armatus
ENSSSCG00000011134	RBM17	100	80.332	ENSMZEG00005015179	rbm17	100	80.332	Maylandia_zebra
ENSSSCG00000011134	RBM17	100	93.873	ENSMGAG00000003981	RBM17	100	93.873	Meleagris_gallopavo
ENSSSCG00000011134	RBM17	100	97.778	ENSMAUG00000019247	Rbm17	100	97.778	Mesocricetus_auratus
ENSSSCG00000011134	RBM17	100	89.976	ENSMICG00000041489	-	100	89.976	Microcebus_murinus
ENSSSCG00000011134	RBM17	100	97.284	ENSMICG00000003976	-	100	97.284	Microcebus_murinus
ENSSSCG00000011134	RBM17	93	79.467	ENSMOCG00000014517	-	99	79.467	Microtus_ochrogaster
ENSSSCG00000011134	RBM17	100	97.778	ENSMOCG00000011847	Rbm17	100	97.778	Microtus_ochrogaster
ENSSSCG00000011134	RBM17	100	75.182	ENSMMOG00000010264	rbm17	100	73.966	Mola_mola
ENSSSCG00000011134	RBM17	100	97.257	ENSMODG00000016648	RBM17	100	97.257	Monodelphis_domestica
ENSSSCG00000011134	RBM17	100	78.118	ENSMALG00000010597	rbm17	100	78.186	Monopterus_albus
ENSSSCG00000011134	RBM17	100	97.531	MGP_CAROLIEiJ_G0023173	Rbm17	100	97.531	Mus_caroli
ENSSSCG00000011134	RBM17	100	97.531	ENSMUSG00000037197	Rbm17	100	97.531	Mus_musculus
ENSSSCG00000011134	RBM17	100	97.037	MGP_PahariEiJ_G0019233	Rbm17	100	97.037	Mus_pahari
ENSSSCG00000011134	RBM17	100	97.531	MGP_SPRETEiJ_G0024091	Rbm17	100	97.531	Mus_spretus
ENSSSCG00000011134	RBM17	86	98.266	ENSMPUG00000016359	RBM17	97	98.266	Mustela_putorius_furo
ENSSSCG00000011134	RBM17	100	96.552	ENSMLUG00000002302	-	100	96.552	Myotis_lucifugus
ENSSSCG00000011134	RBM17	100	93.516	ENSMLUG00000025709	-	100	93.516	Myotis_lucifugus
ENSSSCG00000011134	RBM17	100	68.828	ENSNGAG00000000663	-	100	68.408	Nannospalax_galili
ENSSSCG00000011134	RBM17	100	97.778	ENSNGAG00000000741	Rbm17	100	97.778	Nannospalax_galili
ENSSSCG00000011134	RBM17	100	77.531	ENSNBRG00000018148	rbm17	100	77.531	Neolamprologus_brichardi
ENSSSCG00000011134	RBM17	100	98.753	ENSNLEG00000033350	RBM17	100	98.753	Nomascus_leucogenys
ENSSSCG00000011134	RBM17	100	91.272	ENSMEUG00000011347	RBM17	100	91.272	Notamacropus_eugenii
ENSSSCG00000011134	RBM17	100	85.037	ENSOPRG00000002993	RBM17	100	85.037	Ochotona_princeps
ENSSSCG00000011134	RBM17	100	97.291	ENSODEG00000004393	RBM17	100	97.291	Octodon_degus
ENSSSCG00000011134	RBM17	97	74.300	ENSODEG00000007286	-	99	74.300	Octodon_degus
ENSSSCG00000011134	RBM17	100	83.292	ENSONIG00000011838	rbm17	100	83.292	Oreochromis_niloticus
ENSSSCG00000011134	RBM17	100	95.782	ENSOANG00000015455	RBM17	100	95.782	Ornithorhynchus_anatinus
ENSSSCG00000011134	RBM17	100	79.953	ENSORLG00000028798	rbm17	100	80.590	Oryzias_latipes
ENSSSCG00000011134	RBM17	100	79.953	ENSORLG00020004593	rbm17	100	78.765	Oryzias_latipes_hni
ENSSSCG00000011134	RBM17	100	83.538	ENSORLG00015000033	rbm17	100	83.538	Oryzias_latipes_hsok
ENSSSCG00000011134	RBM17	100	79.717	ENSOMEG00000012060	rbm17	100	88.050	Oryzias_melastigma
ENSSSCG00000011134	RBM17	100	97.531	ENSOGAG00000015687	RBM17	100	97.531	Otolemur_garnettii
ENSSSCG00000011134	RBM17	100	99.751	ENSOARG00000012975	RBM17	100	99.751	Ovis_aries
ENSSSCG00000011134	RBM17	100	98.753	ENSPPAG00000032347	RBM17	100	98.753	Pan_paniscus
ENSSSCG00000011134	RBM17	100	99.002	ENSPPRG00000010706	RBM17	100	99.002	Panthera_pardus
ENSSSCG00000011134	RBM17	100	99.002	ENSPTIG00000007596	RBM17	100	99.002	Panthera_tigris_altaica
ENSSSCG00000011134	RBM17	100	98.753	ENSPTRG00000002265	RBM17	100	98.753	Pan_troglodytes
ENSSSCG00000011134	RBM17	100	98.753	ENSPANG00000023425	RBM17	100	98.753	Papio_anubis
ENSSSCG00000011134	RBM17	100	76.995	ENSPKIG00000005048	-	100	76.995	Paramormyrops_kingsleyae
ENSSSCG00000011134	RBM17	100	80.000	ENSPKIG00000025526	rbm17	100	79.812	Paramormyrops_kingsleyae
ENSSSCG00000011134	RBM17	100	92.593	ENSPSIG00000012332	RBM17	100	92.593	Pelodiscus_sinensis
ENSSSCG00000011134	RBM17	100	77.284	ENSPMGG00000007980	rbm17	100	76.214	Periophthalmus_magnuspinnatus
ENSSSCG00000011134	RBM17	100	97.778	ENSPEMG00000014320	Rbm17	100	97.778	Peromyscus_maniculatus_bairdii
ENSSSCG00000011134	RBM17	100	97.022	ENSPCIG00000019260	-	100	97.022	Phascolarctos_cinereus
ENSSSCG00000011134	RBM17	100	77.594	ENSPFOG00000013271	rbm17	100	78.302	Poecilia_formosa
ENSSSCG00000011134	RBM17	100	77.830	ENSPLAG00000004455	rbm17	100	78.538	Poecilia_latipinna
ENSSSCG00000011134	RBM17	100	80.835	ENSPMEG00000014864	rbm17	100	81.572	Poecilia_mexicana
ENSSSCG00000011134	RBM17	100	76.904	ENSPREG00000015589	rbm17	100	77.594	Poecilia_reticulata
ENSSSCG00000011134	RBM17	99	71.679	ENSPPYG00000019881	-	100	71.429	Pongo_abelii
ENSSSCG00000011134	RBM17	100	98.753	ENSPPYG00000002067	RBM17	100	98.753	Pongo_abelii
ENSSSCG00000011134	RBM17	81	70.588	ENSPPYG00000019042	-	100	70.279	Pongo_abelii
ENSSSCG00000011134	RBM17	100	90.524	ENSPCAG00000016879	RBM17	100	90.524	Procavia_capensis
ENSSSCG00000011134	RBM17	100	98.504	ENSPCOG00000027881	RBM17	100	98.504	Propithecus_coquereli
ENSSSCG00000011134	RBM17	100	88.279	ENSPVAG00000015499	RBM17	100	86.783	Pteropus_vampyrus
ENSSSCG00000011134	RBM17	100	76.119	ENSPNYG00000015274	rbm17	100	76.119	Pundamilia_nyererei
ENSSSCG00000011134	RBM17	100	78.824	ENSPNAG00000030046	rbm17	100	78.824	Pygocentrus_nattereri
ENSSSCG00000011134	RBM17	100	97.778	ENSRNOG00000018767	Rbm17	100	97.778	Rattus_norvegicus
ENSSSCG00000011134	RBM17	100	98.753	ENSRBIG00000043727	RBM17	100	98.753	Rhinopithecus_bieti
ENSSSCG00000011134	RBM17	100	98.753	ENSRROG00000044142	RBM17	100	98.753	Rhinopithecus_roxellana
ENSSSCG00000011134	RBM17	100	98.504	ENSSBOG00000031661	-	100	98.504	Saimiri_boliviensis_boliviensis
ENSSSCG00000011134	RBM17	100	88.060	ENSSBOG00000023653	-	100	88.060	Saimiri_boliviensis_boliviensis
ENSSSCG00000011134	RBM17	100	97.257	ENSSHAG00000012480	-	100	97.257	Sarcophilus_harrisii
ENSSSCG00000011134	RBM17	100	82.801	ENSSFOG00015009892	rbm17	100	82.801	Scleropages_formosus
ENSSSCG00000011134	RBM17	100	78.713	ENSSMAG00000012368	rbm17	100	77.861	Scophthalmus_maximus
ENSSSCG00000011134	RBM17	100	81.840	ENSSDUG00000015015	rbm17	100	81.840	Seriola_dumerili
ENSSSCG00000011134	RBM17	100	81.840	ENSSLDG00000014486	rbm17	100	81.840	Seriola_lalandi_dorsalis
ENSSSCG00000011134	RBM17	59	78.390	ENSSARG00000001792	-	100	78.390	Sorex_araneus
ENSSSCG00000011134	RBM17	99	94.264	ENSSPUG00000001036	RBM17	99	94.264	Sphenodon_punctatus
ENSSSCG00000011134	RBM17	100	82.555	ENSSPAG00000002338	rbm17	100	82.555	Stegastes_partitus
ENSSSCG00000011134	RBM17	100	93.827	ENSTGUG00000002013	RBM17	100	93.827	Taeniopygia_guttata
ENSSSCG00000011134	RBM17	100	82.266	ENSTRUG00000010698	rbm17	100	82.266	Takifugu_rubripes
ENSSSCG00000011134	RBM17	100	82.396	ENSTNIG00000006892	rbm17	100	82.396	Tetraodon_nigroviridis
ENSSSCG00000011134	RBM17	100	76.808	ENSTBEG00000014686	RBM17	100	76.808	Tupaia_belangeri
ENSSSCG00000011134	RBM17	90	99.722	ENSTTRG00000001344	RBM17	100	99.722	Tursiops_truncatus
ENSSSCG00000011134	RBM17	100	94.514	ENSUAMG00000009499	RBM17	100	94.514	Ursus_americanus
ENSSSCG00000011134	RBM17	100	98.753	ENSUMAG00000012237	RBM17	100	98.753	Ursus_maritimus
ENSSSCG00000011134	RBM17	100	85.037	ENSVPAG00000005497	RBM17	100	85.037	Vicugna_pacos
ENSSSCG00000011134	RBM17	100	94.514	ENSVVUG00000006780	RBM17	97	98.266	Vulpes_vulpes
ENSSSCG00000011134	RBM17	99	86.070	ENSXETG00000018123	rbm17	100	86.070	Xenopus_tropicalis
ENSSSCG00000011134	RBM17	100	80.098	ENSXMAG00000008674	rbm17	100	80.835	Xiphophorus_maculatus