EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000011161 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 3394 bases
Position: chr10:68848238-68851631
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000046909	MRP-S27	PF10037.9	2.5e-68	1	2
ENSSSCP00000046909	MRP-S27	PF10037.9	2.5e-68	2	2
ENSSSCP00000051463	MRP-S27	PF10037.9	3.3e-66	1	2
ENSSSCP00000051463	MRP-S27	PF10037.9	3.3e-66	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000012223	-	984	-	ENSSSCP00000051463	327 (aa)	-	A0A287B4V6
ENSSSCT00000028703	-	1005	-	ENSSSCP00000046909	334 (aa)	-	A0A287AS52

Gene Model

Click here to download ENSSSCG00000011161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000011161	-	94	67.568	ENSSSCG00000023818	-	94	67.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011161	-	93	59.945	ENSG00000113048	MRPS27	88	71.591	Homo_sapiens
ENSSSCG00000011161	-	88	43.202	ENSAPOG00000013985	mrps27	80	43.195	Acanthochromis_polyacanthus
ENSSSCG00000011161	-	78	70.790	ENSAMEG00000007215	MRPS27	89	70.790	Ailuropoda_melanoleuca
ENSSSCG00000011161	-	90	43.491	ENSACIG00000004470	mrps27	85	43.787	Amphilophus_citrinellus
ENSSSCG00000011161	-	90	42.899	ENSAOCG00000011222	mrps27	77	42.604	Amphiprion_ocellaris
ENSSSCG00000011161	-	90	42.899	ENSAPEG00000006821	mrps27	81	42.604	Amphiprion_percula
ENSSSCG00000011161	-	90	43.027	ENSATEG00000018107	mrps27	78	42.815	Anabas_testudineus
ENSSSCG00000011161	-	92	52.450	ENSAPLG00000010577	MRPS27	83	52.326	Anas_platyrhynchos
ENSSSCG00000011161	-	91	49.560	ENSACAG00000009787	MRPS27	89	44.772	Anolis_carolinensis
ENSSSCG00000011161	-	95	58.021	ENSANAG00000019419	MRPS27	89	58.021	Aotus_nancymaae
ENSSSCG00000011161	-	88	43.939	ENSACLG00000013665	mrps27	80	44.214	Astatotilapia_calliptera
ENSSSCG00000011161	-	77	45.421	ENSAMXG00000006286	mrps27	65	45.421	Astyanax_mexicanus
ENSSSCG00000011161	-	93	64.345	ENSBTAG00000001962	MRPS27	71	73.630	Bos_taurus
ENSSSCG00000011161	-	95	58.967	ENSCJAG00000016356	MRPS27	89	58.967	Callithrix_jacchus
ENSSSCG00000011161	-	91	56.085	ENSCAFG00000007967	MRPS27	89	56.623	Canis_familiaris
ENSSSCG00000011161	-	96	60.000	ENSCAFG00020019151	MRPS27	77	59.151	Canis_lupus_dingo
ENSSSCG00000011161	-	94	63.187	ENSCHIG00000024940	MRPS27	89	61.247	Capra_hircus
ENSSSCG00000011161	-	94	60.000	ENSTSYG00000000559	MRPS27	89	60.000	Carlito_syrichta
ENSSSCG00000011161	-	62	46.957	ENSCAPG00000012282	-	80	49.180	Cavia_aperea
ENSSSCG00000011161	-	94	61.143	ENSCPOG00000040481	MRPS27	89	58.266	Cavia_porcellus
ENSSSCG00000011161	-	95	59.239	ENSCCAG00000030550	MRPS27	89	59.239	Cebus_capucinus
ENSSSCG00000011161	-	95	59.511	ENSCATG00000034419	MRPS27	83	66.221	Cercocebus_atys
ENSSSCG00000011161	-	94	55.556	ENSCLAG00000000933	MRPS27	89	55.556	Chinchilla_lanigera
ENSSSCG00000011161	-	93	60.446	ENSCSAG00000015626	MRPS27	86	60.446	Chlorocebus_sabaeus
ENSSSCG00000011161	-	78	67.808	ENSCHOG00000002565	MRPS27	80	67.808	Choloepus_hoffmanni
ENSSSCG00000011161	-	93	51.724	ENSCPBG00000000195	MRPS27	83	51.437	Chrysemys_picta_bellii
ENSSSCG00000011161	-	95	60.054	ENSCANG00000034545	MRPS27	87	60.606	Colobus_angolensis_palliatus
ENSSSCG00000011161	-	94	57.724	ENSCGRG00001016241	Mrps27	89	57.724	Cricetulus_griseus_chok1gshd
ENSSSCG00000011161	-	94	57.724	ENSCGRG00000005290	Mrps27	89	57.724	Cricetulus_griseus_crigri
ENSSSCG00000011161	-	85	42.271	ENSCSEG00000017845	mrps27	76	42.271	Cynoglossus_semilaevis
ENSSSCG00000011161	-	91	42.982	ENSCVAG00000020594	mrps27	81	41.765	Cyprinodon_variegatus
ENSSSCG00000011161	-	83	41.497	ENSDARG00000059234	mrps27	71	40.753	Danio_rerio
ENSSSCG00000011161	-	81	63.000	ENSDNOG00000008698	MRPS27	84	63.000	Dasypus_novemcinctus
ENSSSCG00000011161	-	93	58.011	ENSDORG00000028069	Mrps27	89	56.640	Dipodomys_ordii
ENSSSCG00000011161	-	93	51.811	ENSETEG00000016540	MRPS27	92	51.811	Echinops_telfairi
ENSSSCG00000011161	-	85	35.179	ENSEBUG00000008346	mrps27	71	35.179	Eptatretus_burgeri
ENSSSCG00000011161	-	94	61.891	ENSEASG00005018033	MRPS27	80	58.424	Equus_asinus_asinus
ENSSSCG00000011161	-	94	63.324	ENSECAG00000008099	MRPS27	79	59.783	Equus_caballus
ENSSSCG00000011161	-	95	50.000	ENSEEUG00000014006	MRPS27	90	49.730	Erinaceus_europaeus
ENSSSCG00000011161	-	91	39.003	ENSELUG00000002400	mrps27	81	40.000	Esox_lucius
ENSSSCG00000011161	-	96	62.162	ENSFCAG00000005452	MRPS27	89	61.351	Felis_catus
ENSSSCG00000011161	-	92	48.538	ENSFALG00000010306	MRPS27	86	48.555	Ficedula_albicollis
ENSSSCG00000011161	-	95	56.911	ENSFDAG00000011101	MRPS27	88	57.182	Fukomys_damarensis
ENSSSCG00000011161	-	75	41.697	ENSGMOG00000007531	mrps27	65	41.935	Gadus_morhua
ENSSSCG00000011161	-	94	50.997	ENSGALG00000015002	MRPS27	84	50.712	Gallus_gallus
ENSSSCG00000011161	-	82	42.395	ENSGAFG00000010539	mrps27	77	41.234	Gambusia_affinis
ENSSSCG00000011161	-	87	43.252	ENSGACG00000006548	mrps27	80	42.943	Gasterosteus_aculeatus
ENSSSCG00000011161	-	76	58.303	ENSGAGG00000015958	MRPS27	81	52.000	Gopherus_agassizii
ENSSSCG00000011161	-	93	59.669	ENSGGOG00000010683	MRPS27	89	58.108	Gorilla_gorilla
ENSSSCG00000011161	-	88	43.939	ENSHBUG00000003318	mrps27	80	44.214	Haplochromis_burtoni
ENSSSCG00000011161	-	78	65.411	ENSHGLG00000001577	MRPS27	81	65.411	Heterocephalus_glaber_female
ENSSSCG00000011161	-	93	57.660	ENSHGLG00100006845	MRPS27	93	55.285	Heterocephalus_glaber_male
ENSSSCG00000011161	-	57	39.409	ENSHCOG00000000714	mrps27	79	42.500	Hippocampus_comes
ENSSSCG00000011161	-	93	41.954	ENSIPUG00000025051	mrps27	83	42.197	Ictalurus_punctatus
ENSSSCG00000011161	-	93	58.287	ENSSTOG00000006565	MRPS27	86	58.287	Ictidomys_tridecemlineatus
ENSSSCG00000011161	-	88	43.202	ENSKMAG00000000487	mrps27	81	43.195	Kryptolebias_marmoratus
ENSSSCG00000011161	-	87	42.988	ENSLBEG00000018377	mrps27	75	42.730	Labrus_bergylta
ENSSSCG00000011161	-	91	50.294	ENSLACG00000014327	MRPS27	80	50.882	Latimeria_chalumnae
ENSSSCG00000011161	-	77	46.154	ENSLOCG00000011134	mrps27	72	41.806	Lepisosteus_oculatus
ENSSSCG00000011161	-	81	66.667	ENSLAFG00000004110	MRPS27	89	68.729	Loxodonta_africana
ENSSSCG00000011161	-	95	59.511	ENSMFAG00000030039	MRPS27	89	59.511	Macaca_fascicularis
ENSSSCG00000011161	-	95	59.511	ENSMMUG00000017905	MRPS27	89	56.579	Macaca_mulatta
ENSSSCG00000011161	-	95	59.511	ENSMNEG00000038426	MRPS27	89	59.511	Macaca_nemestrina
ENSSSCG00000011161	-	94	60.331	ENSMLEG00000028172	MRPS27	87	60.331	Mandrillus_leucophaeus
ENSSSCG00000011161	-	91	44.706	ENSMAMG00000019547	mrps27	77	44.669	Mastacembelus_armatus
ENSSSCG00000011161	-	88	43.939	ENSMZEG00005008090	mrps27	80	44.214	Maylandia_zebra
ENSSSCG00000011161	-	67	47.266	ENSMGAG00000004213	MRPS27	99	46.154	Meleagris_gallopavo
ENSSSCG00000011161	-	93	45.181	ENSMAUG00000005620	Mrps27	87	45.181	Mesocricetus_auratus
ENSSSCG00000011161	-	93	60.331	ENSMICG00000004527	MRPS27	79	69.388	Microcebus_murinus
ENSSSCG00000011161	-	94	59.659	ENSMOCG00000014839	Mrps27	89	57.027	Microtus_ochrogaster
ENSSSCG00000011161	-	64	48.400	ENSMMOG00000013203	mrps27	74	48.400	Mola_mola
ENSSSCG00000011161	-	94	52.273	ENSMODG00000001687	MRPS27	89	48.257	Monodelphis_domestica
ENSSSCG00000011161	-	90	44.510	ENSMALG00000017925	mrps27	50	44.737	Monopterus_albus
ENSSSCG00000011161	-	92	59.884	MGP_CAROLIEiJ_G0018830	Mrps27	89	55.163	Mus_caroli
ENSSSCG00000011161	-	91	59.412	ENSMUSG00000041632	Mrps27	89	54.891	Mus_musculus
ENSSSCG00000011161	-	91	60.000	MGP_PahariEiJ_G0015905	Mrps27	89	56.131	Mus_pahari
ENSSSCG00000011161	-	91	59.412	MGP_SPRETEiJ_G0019712	Mrps27	89	54.891	Mus_spretus
ENSSSCG00000011161	-	93	61.281	ENSMPUG00000014403	MRPS27	89	60.270	Mustela_putorius_furo
ENSSSCG00000011161	-	78	71.134	ENSMLUG00000007355	MRPS27	89	71.134	Myotis_lucifugus
ENSSSCG00000011161	-	95	59.128	ENSNGAG00000002484	Mrps27	88	59.128	Nannospalax_galili
ENSSSCG00000011161	-	96	45.429	ENSMEUG00000013990	MRPS27	86	45.251	Notamacropus_eugenii
ENSSSCG00000011161	-	91	56.897	ENSOPRG00000007274	MRPS27	82	56.897	Ochotona_princeps
ENSSSCG00000011161	-	78	65.753	ENSODEG00000016210	MRPS27	83	64.765	Octodon_degus
ENSSSCG00000011161	-	75	47.940	ENSONIG00000015240	mrps27	65	47.810	Oreochromis_niloticus
ENSSSCG00000011161	-	91	52.923	ENSOANG00000004072	MRPS27	85	51.692	Ornithorhynchus_anatinus
ENSSSCG00000011161	-	91	59.412	ENSOCUG00000007961	MRPS27	88	55.313	Oryctolagus_cuniculus
ENSSSCG00000011161	-	77	46.520	ENSORLG00020002869	mrps27	71	42.667	Oryzias_latipes_hni
ENSSSCG00000011161	-	77	47.445	ENSORLG00015011723	mrps27	71	42.000	Oryzias_latipes_hsok
ENSSSCG00000011161	-	90	43.027	ENSOMEG00000020582	mrps27	64	47.619	Oryzias_melastigma
ENSSSCG00000011161	-	78	68.385	ENSOGAG00000008385	MRPS27	81	68.385	Otolemur_garnettii
ENSSSCG00000011161	-	94	63.736	ENSOARG00000005129	MRPS27	89	61.789	Ovis_aries
ENSSSCG00000011161	-	93	60.221	ENSPPAG00000038112	MRPS27	76	60.221	Pan_paniscus
ENSSSCG00000011161	-	96	62.162	ENSPPRG00000014416	MRPS27	89	61.351	Panthera_pardus
ENSSSCG00000011161	-	96	61.892	ENSPTIG00000020435	MRPS27	89	61.081	Panthera_tigris_altaica
ENSSSCG00000011161	-	93	60.221	ENSPTRG00000016967	MRPS27	83	66.890	Pan_troglodytes
ENSSSCG00000011161	-	93	60.724	ENSPANG00000015368	MRPS27	86	60.724	Papio_anubis
ENSSSCG00000011161	-	91	41.056	ENSPKIG00000018916	mrps27	77	41.159	Paramormyrops_kingsleyae
ENSSSCG00000011161	-	94	49.857	ENSPSIG00000014565	MRPS27	89	45.553	Pelodiscus_sinensis
ENSSSCG00000011161	-	81	42.545	ENSPMGG00000017275	mrps27	75	45.588	Periophthalmus_magnuspinnatus
ENSSSCG00000011161	-	93	59.249	ENSPEMG00000023724	Mrps27	89	55.827	Peromyscus_maniculatus_bairdii
ENSSSCG00000011161	-	77	41.367	ENSPMAG00000009772	mrps27	76	42.969	Petromyzon_marinus
ENSSSCG00000011161	-	94	53.409	ENSPCIG00000029050	MRPS27	89	50.000	Phascolarctos_cinereus
ENSSSCG00000011161	-	77	47.985	ENSPFOG00000007317	mrps27	81	42.667	Poecilia_formosa
ENSSSCG00000011161	-	90	43.027	ENSPLAG00000016221	mrps27	74	42.308	Poecilia_latipinna
ENSSSCG00000011161	-	90	43.027	ENSPMEG00000016504	mrps27	80	42.308	Poecilia_mexicana
ENSSSCG00000011161	-	93	58.564	ENSPPYG00000015542	MRPS27	89	56.757	Pongo_abelii
ENSSSCG00000011161	-	94	52.033	ENSPCAG00000006737	MRPS27	89	52.033	Procavia_capensis
ENSSSCG00000011161	-	93	61.326	ENSPCOG00000028430	MRPS27	89	58.108	Propithecus_coquereli
ENSSSCG00000011161	-	96	54.595	ENSPVAG00000010933	MRPS27	89	54.595	Pteropus_vampyrus
ENSSSCG00000011161	-	90	43.620	ENSPNYG00000016318	mrps27	81	43.917	Pundamilia_nyererei
ENSSSCG00000011161	-	93	43.429	ENSPNAG00000008002	mrps27	83	43.429	Pygocentrus_nattereri
ENSSSCG00000011161	-	97	58.449	ENSRNOG00000017272	Mrps27	87	58.449	Rattus_norvegicus
ENSSSCG00000011161	-	94	60.331	ENSRBIG00000013185	MRPS27	87	60.331	Rhinopithecus_bieti
ENSSSCG00000011161	-	94	60.331	ENSRROG00000040560	MRPS27	87	60.331	Rhinopithecus_roxellana
ENSSSCG00000011161	-	95	59.511	ENSSBOG00000030386	MRPS27	89	59.511	Saimiri_boliviensis_boliviensis
ENSSSCG00000011161	-	68	59.756	ENSSHAG00000011388	-	90	56.604	Sarcophilus_harrisii
ENSSSCG00000011161	-	91	42.151	ENSSFOG00015023271	mrps27	80	41.570	Scleropages_formosus
ENSSSCG00000011161	-	79	46.125	ENSSMAG00000003423	mrps27	65	46.570	Scophthalmus_maximus
ENSSSCG00000011161	-	90	44.379	ENSSDUG00000001883	mrps27	81	44.675	Seriola_dumerili
ENSSSCG00000011161	-	75	50.534	ENSSARG00000004944	MRPS27	68	50.177	Sorex_araneus
ENSSSCG00000011161	-	83	50.667	ENSSPUG00000000182	MRPS27	79	50.667	Sphenodon_punctatus
ENSSSCG00000011161	-	88	42.136	ENSSPAG00000009682	mrps27	79	42.398	Stegastes_partitus
ENSSSCG00000011161	-	92	48.538	ENSTGUG00000005691	MRPS27	94	43.514	Taeniopygia_guttata
ENSSSCG00000011161	-	77	46.520	ENSTRUG00000015643	mrps27	65	47.080	Takifugu_rubripes
ENSSSCG00000011161	-	90	42.604	ENSTNIG00000016683	mrps27	80	42.012	Tetraodon_nigroviridis
ENSSSCG00000011161	-	80	46.382	ENSTBEG00000016472	MRPS27	70	49.315	Tupaia_belangeri
ENSSSCG00000011161	-	93	65.460	ENSTTRG00000011837	MRPS27	87	65.460	Tursiops_truncatus
ENSSSCG00000011161	-	93	62.396	ENSUAMG00000007585	MRPS27	81	71.233	Ursus_americanus
ENSSSCG00000011161	-	93	62.396	ENSUMAG00000007672	MRPS27	89	60.541	Ursus_maritimus
ENSSSCG00000011161	-	94	56.044	ENSVPAG00000009593	MRPS27	89	55.135	Vicugna_pacos
ENSSSCG00000011161	-	98	59.318	ENSVVUG00000007276	MRPS27	86	59.318	Vulpes_vulpes
ENSSSCG00000011161	-	76	50.362	ENSXETG00000034180	MRPS27	73	45.875	Xenopus_tropicalis
ENSSSCG00000011161	-	90	42.730	ENSXMAG00000016098	mrps27	80	41.543	Xiphophorus_maculatus