EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000011162 (Gene tree)
Gene ID: 100522458
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 86371 bases
Position: chr10:68621523-68707893
Accession: 100522458
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000044949	La	PF05383.17	3.5e-14	1	1
ENSSSCP00000011910	La	PF05383.17	4.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000012224	LARP4B-202	5302	XM_013980371	ENSSSCP00000011910	728 (aa)	XP_013835825	F1RX46
ENSSSCT00000044332	LARP4B-201	2012	-	ENSSSCP00000044949	602 (aa)	-	A0A287AM13

Gene Model

Click here to download ENSSSCG00000011162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011162's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000011162	LARP4B	93	35.771	ENSSSCG00000028516	LARP4	99	37.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011162	LARP4B	100	84.704	ENSG00000107929	LARP4B	100	89.474	Homo_sapiens
ENSSSCG00000011162	LARP4B	97	61.111	ENSAPOG00000020531	LARP4B	100	55.894	Acanthochromis_polyacanthus
ENSSSCG00000011162	LARP4B	100	86.513	ENSAMEG00000001810	LARP4B	100	85.695	Ailuropoda_melanoleuca
ENSSSCG00000011162	LARP4B	99	59.902	ENSAOCG00000007887	-	79	84.106	Amphiprion_ocellaris
ENSSSCG00000011162	LARP4B	99	59.936	ENSAPEG00000002512	LARP4B	96	56.104	Amphiprion_percula
ENSSSCG00000011162	LARP4B	97	58.871	ENSATEG00000012614	LARP4B	100	55.348	Anabas_testudineus
ENSSSCG00000011162	LARP4B	100	74.878	ENSAPLG00000003813	LARP4B	98	72.267	Anas_platyrhynchos
ENSSSCG00000011162	LARP4B	100	72.403	ENSACAG00000002858	LARP4B	100	69.960	Anolis_carolinensis
ENSSSCG00000011162	LARP4B	100	83.388	ENSANAG00000007531	-	100	80.920	Aotus_nancymaae
ENSSSCG00000011162	LARP4B	97	62.376	ENSACLG00000026356	LARP4B	100	56.946	Astatotilapia_calliptera
ENSSSCG00000011162	LARP4B	95	55.668	ENSAMXG00000003335	larp4b	93	51.920	Astyanax_mexicanus
ENSSSCG00000011162	LARP4B	100	89.369	ENSBTAG00000013899	LARP4B	100	88.219	Bos_taurus
ENSSSCG00000011162	LARP4B	100	83.388	ENSCJAG00000018434	LARP4B	100	80.785	Callithrix_jacchus
ENSSSCG00000011162	LARP4B	100	87.500	ENSCAFG00020004209	LARP4B	100	86.376	Canis_lupus_dingo
ENSSSCG00000011162	LARP4B	100	89.535	ENSCHIG00000013543	LARP4B	100	88.356	Capra_hircus
ENSSSCG00000011162	LARP4B	77	89.417	ENSTSYG00000002568	LARP4B	100	84.680	Carlito_syrichta
ENSSSCG00000011162	LARP4B	96	73.921	ENSCAPG00000009725	LARP4B	97	72.817	Cavia_aperea
ENSSSCG00000011162	LARP4B	100	84.539	ENSCPOG00000009375	LARP4B	100	81.597	Cavia_porcellus
ENSSSCG00000011162	LARP4B	100	83.882	ENSCCAG00000024869	LARP4B	100	81.326	Cebus_capucinus
ENSSSCG00000011162	LARP4B	100	84.704	ENSCATG00000019750	LARP4B	100	82.273	Cercocebus_atys
ENSSSCG00000011162	LARP4B	100	85.386	ENSCLAG00000011570	LARP4B	100	82.297	Chinchilla_lanigera
ENSSSCG00000011162	LARP4B	66	82.258	ENSCHOG00000007831	-	66	82.258	Choloepus_hoffmanni
ENSSSCG00000011162	LARP4B	100	74.230	ENSCPBG00000017063	LARP4B	100	71.963	Chrysemys_picta_bellii
ENSSSCG00000011162	LARP4B	100	82.401	ENSCANG00000038021	LARP4B	100	80.379	Colobus_angolensis_palliatus
ENSSSCG00000011162	LARP4B	100	83.443	ENSCGRG00001022930	Larp4b	100	81.242	Cricetulus_griseus_chok1gshd
ENSSSCG00000011162	LARP4B	100	83.443	ENSCGRG00000006022	Larp4b	100	81.242	Cricetulus_griseus_crigri
ENSSSCG00000011162	LARP4B	100	54.545	ENSCSEG00000007342	LARP4B	100	54.328	Cynoglossus_semilaevis
ENSSSCG00000011162	LARP4B	97	60.920	ENSCVAG00000008910	LARP4B	100	55.625	Cyprinodon_variegatus
ENSSSCG00000011162	LARP4B	95	53.885	ENSDARG00000062146	larp4b	91	52.256	Danio_rerio
ENSSSCG00000011162	LARP4B	92	81.786	ENSDNOG00000045543	-	100	85.484	Dasypus_novemcinctus
ENSSSCG00000011162	LARP4B	100	82.102	ENSDORG00000009328	Larp4b	100	79.865	Dipodomys_ordii
ENSSSCG00000011162	LARP4B	85	76.471	ENSETEG00000011249	LARP4B	91	76.471	Echinops_telfairi
ENSSSCG00000011162	LARP4B	100	87.007	ENSEASG00005019068	-	100	85.695	Equus_asinus_asinus
ENSSSCG00000011162	LARP4B	100	87.336	ENSECAG00000024040	LARP4B	100	85.967	Equus_caballus
ENSSSCG00000011162	LARP4B	100	84.452	ENSEEUG00000008391	LARP4B	98	83.039	Erinaceus_europaeus
ENSSSCG00000011162	LARP4B	97	60.995	ENSELUG00000008626	LARP4B	100	56.554	Esox_lucius
ENSSSCG00000011162	LARP4B	89	44.507	ENSELUG00000001417	-	94	40.545	Esox_lucius
ENSSSCG00000011162	LARP4B	99	87.980	ENSFCAG00000000721	-	100	86.141	Felis_catus
ENSSSCG00000011162	LARP4B	100	73.864	ENSFALG00000006961	LARP4B	100	71.791	Ficedula_albicollis
ENSSSCG00000011162	LARP4B	100	85.338	ENSFDAG00000006158	LARP4B	97	82.138	Fukomys_damarensis
ENSSSCG00000011162	LARP4B	96	54.484	ENSFHEG00000013037	LARP4B	65	89.076	Fundulus_heteroclitus
ENSSSCG00000011162	LARP4B	58	42.978	ENSFHEG00000011539	-	78	41.867	Fundulus_heteroclitus
ENSSSCG00000011162	LARP4B	76	65.657	ENSGMOG00000010818	-	89	65.163	Gadus_morhua
ENSSSCG00000011162	LARP4B	99	74.837	ENSGALG00000006672	LARP4B	100	71.676	Gallus_gallus
ENSSSCG00000011162	LARP4B	99	60.157	ENSGACG00000017535	LARP4B	98	58.149	Gasterosteus_aculeatus
ENSSSCG00000011162	LARP4B	89	76.407	ENSGAGG00000008598	LARP4B	100	73.646	Gopherus_agassizii
ENSSSCG00000011162	LARP4B	100	84.868	ENSGGOG00000003572	LARP4B	100	82.544	Gorilla_gorilla
ENSSSCG00000011162	LARP4B	97	61.720	ENSHBUG00000007535	LARP4B	100	56.446	Haplochromis_burtoni
ENSSSCG00000011162	LARP4B	100	85.057	ENSHGLG00000012936	LARP4B	100	82.321	Heterocephalus_glaber_female
ENSSSCG00000011162	LARP4B	100	85.173	ENSHGLG00100016220	-	100	82.409	Heterocephalus_glaber_male
ENSSSCG00000011162	LARP4B	98	71.769	ENSHGLG00100017261	-	100	69.876	Heterocephalus_glaber_male
ENSSSCG00000011162	LARP4B	94	59.520	ENSHCOG00000011581	LARP4B	89	54.522	Hippocampus_comes
ENSSSCG00000011162	LARP4B	97	54.139	ENSIPUG00000009705	larp4b	91	51.622	Ictalurus_punctatus
ENSSSCG00000011162	LARP4B	95	87.674	ENSSTOG00000000587	LARP4B	100	80.759	Ictidomys_tridecemlineatus
ENSSSCG00000011162	LARP4B	100	84.211	ENSJJAG00000020847	Larp4b	100	81.191	Jaculus_jaculus
ENSSSCG00000011162	LARP4B	97	61.616	ENSKMAG00000021674	LARP4B	100	56.250	Kryptolebias_marmoratus
ENSSSCG00000011162	LARP4B	95	61.333	ENSLBEG00000025293	-	79	61.333	Labrus_bergylta
ENSSSCG00000011162	LARP4B	91	62.209	ENSLACG00000009492	LARP4B	100	62.645	Latimeria_chalumnae
ENSSSCG00000011162	LARP4B	100	65.176	ENSLOCG00000012290	larp4b	100	62.536	Lepisosteus_oculatus
ENSSSCG00000011162	LARP4B	100	81.699	ENSLAFG00000015334	LARP4B	100	79.408	Loxodonta_africana
ENSSSCG00000011162	LARP4B	100	84.704	ENSMFAG00000001766	LARP4B	100	80.244	Macaca_fascicularis
ENSSSCG00000011162	LARP4B	100	84.704	ENSMMUG00000005279	LARP4B	100	82.273	Macaca_mulatta
ENSSSCG00000011162	LARP4B	100	84.539	ENSMNEG00000014019	LARP4B	100	80.108	Macaca_nemestrina
ENSSSCG00000011162	LARP4B	100	84.704	ENSMLEG00000035198	LARP4B	100	82.162	Mandrillus_leucophaeus
ENSSSCG00000011162	LARP4B	95	61.065	ENSMAMG00000013742	LARP4B	100	55.915	Mastacembelus_armatus
ENSSSCG00000011162	LARP4B	97	61.881	ENSMZEG00005006498	-	97	60.890	Maylandia_zebra
ENSSSCG00000011162	LARP4B	75	69.546	ENSMZEG00005014594	-	100	57.299	Maylandia_zebra
ENSSSCG00000011162	LARP4B	100	70.628	ENSMGAG00000005472	LARP4B	100	70.628	Meleagris_gallopavo
ENSSSCG00000011162	LARP4B	100	84.262	ENSMAUG00000021657	Larp4b	100	81.671	Mesocricetus_auratus
ENSSSCG00000011162	LARP4B	99	81.167	ENSMICG00000001301	LARP4B	100	77.823	Microcebus_murinus
ENSSSCG00000011162	LARP4B	94	85.439	ENSMOCG00000021452	Larp4b	91	81.623	Microtus_ochrogaster
ENSSSCG00000011162	LARP4B	81	59.935	ENSMMOG00000011253	-	89	60.258	Mola_mola
ENSSSCG00000011162	LARP4B	100	73.366	ENSMODG00000005957	LARP4B	100	69.841	Monodelphis_domestica
ENSSSCG00000011162	LARP4B	100	49.128	ENSMALG00000012432	LARP4B	100	50.201	Monopterus_albus
ENSSSCG00000011162	LARP4B	100	84.539	MGP_CAROLIEiJ_G0018216	Larp4b	100	81.081	Mus_caroli
ENSSSCG00000011162	LARP4B	100	83.934	ENSMUSG00000033499	Larp4b	100	80.728	Mus_musculus
ENSSSCG00000011162	LARP4B	100	84.211	MGP_PahariEiJ_G0019266	Larp4b	100	81.486	Mus_pahari
ENSSSCG00000011162	LARP4B	100	83.934	MGP_SPRETEiJ_G0019074	Larp4b	100	80.593	Mus_spretus
ENSSSCG00000011162	LARP4B	100	86.513	ENSMPUG00000016220	LARP4B	97	85.286	Mustela_putorius_furo
ENSSSCG00000011162	LARP4B	92	85.637	ENSMLUG00000005880	LARP4B	100	82.577	Myotis_lucifugus
ENSSSCG00000011162	LARP4B	100	83.882	ENSNGAG00000001750	Larp4b	100	81.191	Nannospalax_galili
ENSSSCG00000011162	LARP4B	81	54.619	ENSNBRG00000020018	LARP4B	88	54.943	Neolamprologus_brichardi
ENSSSCG00000011162	LARP4B	100	84.539	ENSNLEG00000013442	LARP4B	100	82.138	Nomascus_leucogenys
ENSSSCG00000011162	LARP4B	83	64.674	ENSMEUG00000013114	-	83	64.674	Notamacropus_eugenii
ENSSSCG00000011162	LARP4B	100	80.650	ENSOPRG00000003300	LARP4B	100	78.954	Ochotona_princeps
ENSSSCG00000011162	LARP4B	100	79.934	ENSODEG00000001109	LARP4B	100	77.808	Octodon_degus
ENSSSCG00000011162	LARP4B	97	62.810	ENSONIG00000017705	LARP4B	100	58.537	Oreochromis_niloticus
ENSSSCG00000011162	LARP4B	100	71.865	ENSOANG00000006100	LARP4B	100	70.106	Ornithorhynchus_anatinus
ENSSSCG00000011162	LARP4B	100	82.250	ENSOCUG00000004950	LARP4B	97	80.315	Oryctolagus_cuniculus
ENSSSCG00000011162	LARP4B	97	59.355	ENSORLG00000006080	LARP4B	100	54.602	Oryzias_latipes
ENSSSCG00000011162	LARP4B	97	59.966	ENSORLG00020020940	LARP4B	100	54.604	Oryzias_latipes_hni
ENSSSCG00000011162	LARP4B	97	60.134	ENSORLG00015020608	LARP4B	100	55.000	Oryzias_latipes_hsok
ENSSSCG00000011162	LARP4B	100	53.462	ENSOMEG00000019619	LARP4B	100	53.718	Oryzias_melastigma
ENSSSCG00000011162	LARP4B	92	82.060	ENSOGAG00000011540	LARP4B	100	78.674	Otolemur_garnettii
ENSSSCG00000011162	LARP4B	100	89.091	ENSOARG00000015320	LARP4B	98	88.131	Ovis_aries
ENSSSCG00000011162	LARP4B	100	84.868	ENSPPAG00000039232	LARP4B	100	82.409	Pan_paniscus
ENSSSCG00000011162	LARP4B	100	87.336	ENSPPRG00000009489	LARP4B	100	86.240	Panthera_pardus
ENSSSCG00000011162	LARP4B	100	87.336	ENSPTIG00000008543	LARP4B	100	86.240	Panthera_tigris_altaica
ENSSSCG00000011162	LARP4B	100	84.868	ENSPTRG00000002235	LARP4B	100	82.409	Pan_troglodytes
ENSSSCG00000011162	LARP4B	100	84.704	ENSPANG00000023546	LARP4B	100	80.244	Papio_anubis
ENSSSCG00000011162	LARP4B	97	58.429	ENSPKIG00000012368	LARP4B	99	54.805	Paramormyrops_kingsleyae
ENSSSCG00000011162	LARP4B	93	83.758	ENSPSIG00000005600	LARP4B	99	83.758	Pelodiscus_sinensis
ENSSSCG00000011162	LARP4B	95	58.966	ENSPMGG00000008261	LARP4B	91	52.049	Periophthalmus_magnuspinnatus
ENSSSCG00000011162	LARP4B	100	84.704	ENSPEMG00000014052	Larp4b	100	81.867	Peromyscus_maniculatus_bairdii
ENSSSCG00000011162	LARP4B	97	59.278	ENSPFOG00000000029	LARP4B	100	54.478	Poecilia_formosa
ENSSSCG00000011162	LARP4B	100	56.447	ENSPLAG00000002871	LARP4B	100	56.827	Poecilia_latipinna
ENSSSCG00000011162	LARP4B	97	60.336	ENSPMEG00000016361	LARP4B	100	55.076	Poecilia_mexicana
ENSSSCG00000011162	LARP4B	100	85.057	ENSPPYG00000002035	LARP4B	97	82.703	Pongo_abelii
ENSSSCG00000011162	LARP4B	100	84.934	ENSPCOG00000014688	LARP4B	100	81.633	Propithecus_coquereli
ENSSSCG00000011162	LARP4B	85	97.143	ENSPVAG00000009784	LARP4B	88	97.143	Pteropus_vampyrus
ENSSSCG00000011162	LARP4B	97	62.376	ENSPNYG00000024252	LARP4B	100	56.821	Pundamilia_nyererei
ENSSSCG00000011162	LARP4B	95	55.462	ENSPNAG00000028956	larp4b	93	52.518	Pygocentrus_nattereri
ENSSSCG00000011162	LARP4B	100	84.704	ENSRNOG00000015888	Larp4b	100	81.732	Rattus_norvegicus
ENSSSCG00000011162	LARP4B	100	84.539	ENSRBIG00000033294	LARP4B	100	82.003	Rhinopithecus_bieti
ENSSSCG00000011162	LARP4B	100	84.375	ENSRROG00000033879	LARP4B	100	81.867	Rhinopithecus_roxellana
ENSSSCG00000011162	LARP4B	100	76.974	ENSSBOG00000021109	LARP4B	100	75.643	Saimiri_boliviensis_boliviensis
ENSSSCG00000011162	LARP4B	100	74.715	ENSSHAG00000013392	LARP4B	100	71.658	Sarcophilus_harrisii
ENSSSCG00000011162	LARP4B	97	61.093	ENSSFOG00015003256	LARP4B	93	57.441	Scleropages_formosus
ENSSSCG00000011162	LARP4B	96	58.814	ENSSMAG00000005982	-	95	62.562	Scophthalmus_maximus
ENSSSCG00000011162	LARP4B	99	60.196	ENSSDUG00000006704	LARP4B	100	55.711	Seriola_dumerili
ENSSSCG00000011162	LARP4B	86	60.395	ENSSLDG00000020660	LARP4B	91	61.836	Seriola_lalandi_dorsalis
ENSSSCG00000011162	LARP4B	63	99.057	ENSSARG00000001243	-	79	99.057	Sorex_araneus
ENSSSCG00000011162	LARP4B	76	79.869	ENSSPUG00000013734	-	91	75.042	Sphenodon_punctatus
ENSSSCG00000011162	LARP4B	100	71.901	ENSSPUG00000002102	-	100	69.742	Sphenodon_punctatus
ENSSSCG00000011162	LARP4B	81	62.338	ENSSPAG00000014628	LARP4B	88	62.338	Stegastes_partitus
ENSSSCG00000011162	LARP4B	100	74.388	ENSTGUG00000000811	-	100	71.946	Taeniopygia_guttata
ENSSSCG00000011162	LARP4B	98	56.101	ENSTNIG00000007991	LARP4B	100	54.242	Tetraodon_nigroviridis
ENSSSCG00000011162	LARP4B	100	56.104	ENSTNIG00000004571	-	98	56.347	Tetraodon_nigroviridis
ENSSSCG00000011162	LARP4B	90	91.700	ENSTTRG00000011151	LARP4B	90	91.700	Tursiops_truncatus
ENSSSCG00000011162	LARP4B	100	87.993	ENSUAMG00000016461	LARP4B	95	87.422	Ursus_americanus
ENSSSCG00000011162	LARP4B	100	87.829	ENSUMAG00000016127	LARP4B	100	86.649	Ursus_maritimus
ENSSSCG00000011162	LARP4B	63	94.944	ENSVPAG00000000128	-	73	94.944	Vicugna_pacos
ENSSSCG00000011162	LARP4B	100	87.336	ENSVVUG00000008641	LARP4B	100	86.104	Vulpes_vulpes
ENSSSCG00000011162	LARP4B	97	71.572	ENSXETG00000016882	larp4b	100	67.020	Xenopus_tropicalis
ENSSSCG00000011162	LARP4B	100	52.850	ENSXCOG00000019952	LARP4B	100	52.850	Xiphophorus_couchianus
ENSSSCG00000011162	LARP4B	97	60.000	ENSXMAG00000021533	LARP4B	100	54.534	Xiphophorus_maculatus