EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000011329 (Gene tree)
Gene ID: 100515924
Gene Symbol: -
Alias: -
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 59209 bases
Position: chr13:29787430-29846638
Accession: 100515924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000012081	cwf18	PF08315.12	5.8e-38	1	1
ENSSSCP00000038614	cwf18	PF08315.12	5.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000044231	-	5119	XM_005669466	ENSSSCP00000038614	165 (aa)	XP_005669523	F1SNV1
ENSSSCT00000012405	-	4171	-	ENSSSCP00000012081	165 (aa)	-	F1SNV1

Gene Model

Click here to download ENSSSCG00000011329's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011329's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000011329	-	95	54.140	ENSSSCG00000007882	-	99	54.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011329	-	100	93.976	ENSG00000160799	CCDC12	100	94.382	Homo_sapiens
ENSSSCG00000011329	-	96	70.807	ENSAPOG00000014426	ccdc12	59	70.807	Acanthochromis_polyacanthus
ENSSSCG00000011329	-	100	97.590	ENSAMEG00000012658	CCDC12	100	97.590	Ailuropoda_melanoleuca
ENSSSCG00000011329	-	68	77.679	ENSACIG00000015192	ccdc12	80	77.679	Amphilophus_citrinellus
ENSSSCG00000011329	-	69	78.070	ENSACIG00000022676	-	81	78.070	Amphilophus_citrinellus
ENSSSCG00000011329	-	96	71.250	ENSAOCG00000024127	ccdc12	95	71.250	Amphiprion_ocellaris
ENSSSCG00000011329	-	96	70.807	ENSAPEG00000009155	ccdc12	84	70.807	Amphiprion_percula
ENSSSCG00000011329	-	81	70.149	ENSATEG00000004807	ccdc12	100	70.149	Anabas_testudineus
ENSSSCG00000011329	-	81	72.593	ENSAPLG00000005482	CCDC12	99	72.593	Anas_platyrhynchos
ENSSSCG00000011329	-	98	74.850	ENSACAG00000004727	CCDC12	86	74.850	Anolis_carolinensis
ENSSSCG00000011329	-	81	95.522	ENSANAG00000024483	CCDC12	100	95.522	Aotus_nancymaae
ENSSSCG00000011329	-	93	60.897	ENSACLG00000012742	-	96	60.897	Astatotilapia_calliptera
ENSSSCG00000011329	-	96	70.186	ENSACLG00000005356	ccdc12	98	70.186	Astatotilapia_calliptera
ENSSSCG00000011329	-	96	69.325	ENSAMXG00000016319	ccdc12	98	69.325	Astyanax_mexicanus
ENSSSCG00000011329	-	100	95.238	ENSBTAG00000011311	CCDC12	100	95.238	Bos_taurus
ENSSSCG00000011329	-	81	40.580	WBGene00022092	Y69A2AR.21	82	39.597	Caenorhabditis_elegans
ENSSSCG00000011329	-	100	94.578	ENSCJAG00000002280	CCDC12	100	94.578	Callithrix_jacchus
ENSSSCG00000011329	-	100	98.795	ENSCAFG00000013588	CCDC12	100	98.795	Canis_familiaris
ENSSSCG00000011329	-	100	98.795	ENSCAFG00020014024	CCDC12	93	98.795	Canis_lupus_dingo
ENSSSCG00000011329	-	100	91.667	ENSCHIG00000014512	CCDC12	100	94.643	Capra_hircus
ENSSSCG00000011329	-	100	95.181	ENSTSYG00000032837	CCDC12	100	95.181	Carlito_syrichta
ENSSSCG00000011329	-	81	75.373	ENSCAPG00000007935	CCDC12	100	76.119	Cavia_aperea
ENSSSCG00000011329	-	100	96.988	ENSCPOG00000032515	CCDC12	100	96.988	Cavia_porcellus
ENSSSCG00000011329	-	100	94.578	ENSCCAG00000020126	CCDC12	93	94.578	Cebus_capucinus
ENSSSCG00000011329	-	100	78.235	ENSCATG00000033681	CCDC12	92	78.235	Cercocebus_atys
ENSSSCG00000011329	-	100	96.988	ENSCLAG00000016013	CCDC12	100	96.988	Chinchilla_lanigera
ENSSSCG00000011329	-	100	93.976	ENSCSAG00000016154	CCDC12	93	93.976	Chlorocebus_sabaeus
ENSSSCG00000011329	-	99	76.364	ENSCPBG00000015804	CCDC12	79	76.364	Chrysemys_picta_bellii
ENSSSCG00000011329	-	96	50.602	ENSCING00000005261	-	96	50.602	Ciona_intestinalis
ENSSSCG00000011329	-	100	93.976	ENSCANG00000020857	CCDC12	93	93.976	Colobus_angolensis_palliatus
ENSSSCG00000011329	-	100	94.578	ENSCGRG00001000459	Ccdc12	100	94.578	Cricetulus_griseus_chok1gshd
ENSSSCG00000011329	-	100	94.578	ENSCGRG00000012816	Ccdc12	100	94.578	Cricetulus_griseus_crigri
ENSSSCG00000011329	-	96	67.702	ENSCSEG00000004543	ccdc12	98	67.702	Cynoglossus_semilaevis
ENSSSCG00000011329	-	81	70.149	ENSCVAG00000011342	ccdc12	100	70.149	Cyprinodon_variegatus
ENSSSCG00000011329	-	96	67.925	ENSDARG00000023003	ccdc12	98	67.925	Danio_rerio
ENSSSCG00000011329	-	100	84.337	ENSDORG00000024399	-	100	84.337	Dipodomys_ordii
ENSSSCG00000011329	-	100	95.181	ENSDORG00000016567	-	100	95.181	Dipodomys_ordii
ENSSSCG00000011329	-	96	44.025	FBgn0039732	CG15525	92	44.025	Drosophila_melanogaster
ENSSSCG00000011329	-	68	93.805	ENSETEG00000000030	CCDC12	100	93.805	Echinops_telfairi
ENSSSCG00000011329	-	98	62.346	ENSEBUG00000005674	ccdc12	100	62.346	Eptatretus_burgeri
ENSSSCG00000011329	-	100	97.590	ENSEASG00005008148	-	69	97.590	Equus_asinus_asinus
ENSSSCG00000011329	-	100	92.169	ENSECAG00000008649	CCDC12	100	92.169	Equus_caballus
ENSSSCG00000011329	-	96	69.753	ENSELUG00000024105	ccdc12	98	70.370	Esox_lucius
ENSSSCG00000011329	-	100	99.398	ENSFCAG00000015474	CCDC12	100	99.398	Felis_catus
ENSSSCG00000011329	-	89	66.667	ENSFALG00000001895	CCDC12	92	66.667	Ficedula_albicollis
ENSSSCG00000011329	-	99	97.561	ENSFDAG00000002549	CCDC12	99	97.561	Fukomys_damarensis
ENSSSCG00000011329	-	96	70.186	ENSFHEG00000016247	ccdc12	91	70.186	Fundulus_heteroclitus
ENSSSCG00000011329	-	96	60.000	ENSGMOG00000016901	ccdc12	98	60.000	Gadus_morhua
ENSSSCG00000011329	-	96	68.750	ENSGAFG00000006762	ccdc12	98	68.750	Gambusia_affinis
ENSSSCG00000011329	-	96	66.875	ENSGACG00000008629	ccdc12	98	66.875	Gasterosteus_aculeatus
ENSSSCG00000011329	-	100	78.107	ENSGAGG00000019688	CCDC12	100	78.107	Gopherus_agassizii
ENSSSCG00000011329	-	100	93.976	ENSGGOG00000009012	CCDC12	93	93.976	Gorilla_gorilla
ENSSSCG00000011329	-	96	70.807	ENSHBUG00000016447	ccdc12	98	70.807	Haplochromis_burtoni
ENSSSCG00000011329	-	100	96.386	ENSHGLG00000014058	CCDC12	100	96.386	Heterocephalus_glaber_female
ENSSSCG00000011329	-	100	96.386	ENSHGLG00100005918	CCDC12	100	96.386	Heterocephalus_glaber_male
ENSSSCG00000011329	-	96	66.667	ENSHCOG00000015164	ccdc12	98	66.667	Hippocampus_comes
ENSSSCG00000011329	-	96	67.081	ENSIPUG00000001310	Ccdc12	98	67.081	Ictalurus_punctatus
ENSSSCG00000011329	-	100	96.988	ENSSTOG00000003085	CCDC12	100	96.988	Ictidomys_tridecemlineatus
ENSSSCG00000011329	-	100	95.181	ENSJJAG00000014918	Ccdc12	100	95.181	Jaculus_jaculus
ENSSSCG00000011329	-	96	67.284	ENSKMAG00000013891	ccdc12	98	67.284	Kryptolebias_marmoratus
ENSSSCG00000011329	-	96	69.811	ENSLBEG00000024714	ccdc12	85	69.811	Labrus_bergylta
ENSSSCG00000011329	-	98	72.393	ENSLOCG00000005683	ccdc12	92	72.393	Lepisosteus_oculatus
ENSSSCG00000011329	-	67	95.536	ENSLAFG00000022573	-	98	95.536	Loxodonta_africana
ENSSSCG00000011329	-	98	88.344	ENSLAFG00000027745	-	100	88.344	Loxodonta_africana
ENSSSCG00000011329	-	100	93.373	ENSMFAG00000002976	CCDC12	93	93.373	Macaca_fascicularis
ENSSSCG00000011329	-	100	93.373	ENSMMUG00000019810	CCDC12	93	93.373	Macaca_mulatta
ENSSSCG00000011329	-	100	93.373	ENSMNEG00000035785	CCDC12	93	93.373	Macaca_nemestrina
ENSSSCG00000011329	-	100	93.976	ENSMLEG00000038060	CCDC12	93	93.976	Mandrillus_leucophaeus
ENSSSCG00000011329	-	96	69.565	ENSMAMG00000012165	ccdc12	98	69.565	Mastacembelus_armatus
ENSSSCG00000011329	-	96	70.807	ENSMZEG00005014728	ccdc12	98	70.807	Maylandia_zebra
ENSSSCG00000011329	-	93	61.538	ENSMZEG00005019013	-	96	61.538	Maylandia_zebra
ENSSSCG00000011329	-	80	71.429	ENSMGAG00000002815	CCDC12	100	64.773	Meleagris_gallopavo
ENSSSCG00000011329	-	100	93.976	ENSMAUG00000008879	Ccdc12	100	93.976	Mesocricetus_auratus
ENSSSCG00000011329	-	100	95.808	ENSMICG00000032886	CCDC12	100	95.808	Microcebus_murinus
ENSSSCG00000011329	-	100	94.578	ENSMOCG00000004483	Ccdc12	100	94.578	Microtus_ochrogaster
ENSSSCG00000011329	-	67	72.973	ENSMMOG00000001860	ccdc12	77	72.973	Mola_mola
ENSSSCG00000011329	-	100	67.470	ENSMODG00000022615	-	100	67.470	Monodelphis_domestica
ENSSSCG00000011329	-	100	67.470	ENSMODG00000025021	-	100	67.470	Monodelphis_domestica
ENSSSCG00000011329	-	100	80.240	ENSMODG00000013967	-	100	80.838	Monodelphis_domestica
ENSSSCG00000011329	-	96	68.944	ENSMALG00000011850	ccdc12	98	68.944	Monopterus_albus
ENSSSCG00000011329	-	100	93.373	MGP_CAROLIEiJ_G0032737	-	100	93.373	Mus_caroli
ENSSSCG00000011329	-	100	93.373	ENSMUSG00000019659	Ccdc12	100	93.373	Mus_musculus
ENSSSCG00000011329	-	100	93.373	MGP_PahariEiJ_G0015604	Ccdc12	100	93.373	Mus_pahari
ENSSSCG00000011329	-	100	93.976	MGP_SPRETEiJ_G0033885	Ccdc12	100	93.976	Mus_spretus
ENSSSCG00000011329	-	100	92.169	ENSMLUG00000009547	CCDC12	100	92.169	Myotis_lucifugus
ENSSSCG00000011329	-	100	94.578	ENSNGAG00000004149	Ccdc12	100	94.578	Nannospalax_galili
ENSSSCG00000011329	-	96	65.190	ENSNBRG00000015275	ccdc12	97	65.190	Neolamprologus_brichardi
ENSSSCG00000011329	-	100	92.169	ENSNLEG00000006219	CCDC12	100	92.169	Nomascus_leucogenys
ENSSSCG00000011329	-	99	87.805	ENSOPRG00000005086	CCDC12	99	89.024	Ochotona_princeps
ENSSSCG00000011329	-	100	97.590	ENSODEG00000012202	CCDC12	100	97.590	Octodon_degus
ENSSSCG00000011329	-	96	70.807	ENSONIG00000003061	ccdc12	98	70.807	Oreochromis_niloticus
ENSSSCG00000011329	-	80	75.188	ENSOANG00000004263	-	100	75.188	Ornithorhynchus_anatinus
ENSSSCG00000011329	-	100	96.386	ENSOCUG00000012431	CCDC12	85	96.386	Oryctolagus_cuniculus
ENSSSCG00000011329	-	96	67.284	ENSORLG00000008126	ccdc12	98	67.284	Oryzias_latipes
ENSSSCG00000011329	-	96	68.750	ENSORLG00020013927	ccdc12	98	68.750	Oryzias_latipes_hni
ENSSSCG00000011329	-	96	68.750	ENSORLG00015020115	ccdc12	98	68.750	Oryzias_latipes_hsok
ENSSSCG00000011329	-	96	68.750	ENSOMEG00000014082	ccdc12	98	68.750	Oryzias_melastigma
ENSSSCG00000011329	-	96	68.750	ENSOMEG00000022304	ccdc12	98	68.750	Oryzias_melastigma
ENSSSCG00000011329	-	67	96.429	ENSOGAG00000016807	CCDC12	100	96.429	Otolemur_garnettii
ENSSSCG00000011329	-	81	89.781	ENSOARG00000006426	CCDC12	100	93.431	Ovis_aries
ENSSSCG00000011329	-	100	93.373	ENSPPAG00000028782	CCDC12	93	93.373	Pan_paniscus
ENSSSCG00000011329	-	100	99.398	ENSPPRG00000013547	CCDC12	100	99.398	Panthera_pardus
ENSSSCG00000011329	-	100	99.398	ENSPTIG00000014875	CCDC12	95	99.398	Panthera_tigris_altaica
ENSSSCG00000011329	-	100	93.976	ENSPTRG00000014862	CCDC12	93	93.976	Pan_troglodytes
ENSSSCG00000011329	-	100	93.976	ENSPANG00000017485	CCDC12	95	93.976	Papio_anubis
ENSSSCG00000011329	-	96	68.750	ENSPKIG00000019130	ccdc12	98	71.429	Paramormyrops_kingsleyae
ENSSSCG00000011329	-	67	82.883	ENSPSIG00000010867	CCDC12	100	82.883	Pelodiscus_sinensis
ENSSSCG00000011329	-	96	68.323	ENSPMGG00000012211	ccdc12	98	68.323	Periophthalmus_magnuspinnatus
ENSSSCG00000011329	-	100	94.578	ENSPEMG00000022196	-	100	94.578	Peromyscus_maniculatus_bairdii
ENSSSCG00000011329	-	100	74.251	ENSPEMG00000001376	-	100	74.251	Peromyscus_maniculatus_bairdii
ENSSSCG00000011329	-	94	66.667	ENSPMAG00000000005	ccdc12	99	65.476	Petromyzon_marinus
ENSSSCG00000011329	-	100	81.818	ENSPCIG00000025941	CCDC12	100	81.818	Phascolarctos_cinereus
ENSSSCG00000011329	-	96	69.565	ENSPFOG00000000343	ccdc12	98	69.565	Poecilia_formosa
ENSSSCG00000011329	-	96	68.750	ENSPLAG00000019010	ccdc12	98	68.750	Poecilia_latipinna
ENSSSCG00000011329	-	96	69.565	ENSPMEG00000022371	ccdc12	79	69.565	Poecilia_mexicana
ENSSSCG00000011329	-	96	69.565	ENSPREG00000020932	ccdc12	79	69.565	Poecilia_reticulata
ENSSSCG00000011329	-	100	93.976	ENSPPYG00000013924	CCDC12	82	93.976	Pongo_abelii
ENSSSCG00000011329	-	100	95.808	ENSPCAG00000005800	CCDC12	100	95.808	Procavia_capensis
ENSSSCG00000011329	-	100	96.407	ENSPCOG00000018682	CCDC12	93	96.407	Propithecus_coquereli
ENSSSCG00000011329	-	100	96.386	ENSPVAG00000004204	CCDC12	100	96.386	Pteropus_vampyrus
ENSSSCG00000011329	-	96	70.807	ENSPNYG00000016295	ccdc12	98	70.807	Pundamilia_nyererei
ENSSSCG00000011329	-	96	54.658	ENSPNAG00000028558	ccdc12	90	78.378	Pygocentrus_nattereri
ENSSSCG00000011329	-	100	93.373	ENSRNOG00000020946	Ccdc12	100	93.373	Rattus_norvegicus
ENSSSCG00000011329	-	100	93.976	ENSRBIG00000039910	CCDC12	93	93.976	Rhinopithecus_bieti
ENSSSCG00000011329	-	100	93.976	ENSRROG00000039721	CCDC12	100	93.976	Rhinopithecus_roxellana
ENSSSCG00000011329	-	100	94.578	ENSSBOG00000035443	CCDC12	93	94.578	Saimiri_boliviensis_boliviensis
ENSSSCG00000011329	-	100	81.818	ENSSHAG00000003265	-	100	81.818	Sarcophilus_harrisii
ENSSSCG00000011329	-	97	69.753	ENSSFOG00015001307	ccdc12	99	69.753	Scleropages_formosus
ENSSSCG00000011329	-	87	73.288	ENSSMAG00000019856	ccdc12	98	70.370	Scophthalmus_maximus
ENSSSCG00000011329	-	94	69.427	ENSSDUG00000006549	ccdc12	96	69.427	Seriola_dumerili
ENSSSCG00000011329	-	96	69.565	ENSSLDG00000015956	ccdc12	98	69.565	Seriola_lalandi_dorsalis
ENSSSCG00000011329	-	58	96.875	ENSSARG00000004686	-	58	96.875	Sorex_araneus
ENSSSCG00000011329	-	69	71.304	ENSSPUG00000013054	CCDC12	91	49.660	Sphenodon_punctatus
ENSSSCG00000011329	-	96	69.565	ENSSPAG00000007010	ccdc12	98	69.565	Stegastes_partitus
ENSSSCG00000011329	-	69	62.698	ENSTGUG00000000186	CCDC12	100	62.698	Taeniopygia_guttata
ENSSSCG00000011329	-	96	65.190	ENSTRUG00000014023	ccdc12	83	65.190	Takifugu_rubripes
ENSSSCG00000011329	-	96	69.620	ENSTNIG00000018407	ccdc12	96	69.620	Tetraodon_nigroviridis
ENSSSCG00000011329	-	100	69.461	ENSTBEG00000000048	CCDC12	100	69.461	Tupaia_belangeri
ENSSSCG00000011329	-	100	86.905	ENSTTRG00000015854	CCDC12	100	86.905	Tursiops_truncatus
ENSSSCG00000011329	-	100	92.771	ENSUAMG00000025548	CCDC12	97	99.286	Ursus_americanus
ENSSSCG00000011329	-	100	98.795	ENSUMAG00000004346	CCDC12	100	98.795	Ursus_maritimus
ENSSSCG00000011329	-	68	76.991	ENSVPAG00000000070	-	100	76.991	Vicugna_pacos
ENSSSCG00000011329	-	100	98.795	ENSVVUG00000004582	CCDC12	100	98.795	Vulpes_vulpes
ENSSSCG00000011329	-	80	80.303	ENSXETG00000013123	ccdc12	98	80.303	Xenopus_tropicalis
ENSSSCG00000011329	-	96	68.750	ENSXCOG00000019741	ccdc12	98	68.750	Xiphophorus_couchianus
ENSSSCG00000011329	-	96	68.750	ENSXMAG00000014098	ccdc12	79	68.750	Xiphophorus_maculatus