EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000011342 (Gene tree)
Gene ID: 100518989
Gene Symbol: DHX30
Alias: DDX30|FLJ11214|KIAA0890
Full Name: DExH-box helicase 30
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 33423 bases
Position: chr13:30602223-30635645
Accession: 100518989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000051894	DEAD	PF00270.29	1.8e-06	1	1
ENSSSCP00000012095	DEAD	PF00270.29	1.9e-06	1	1
ENSSSCP00000048492	DEAD	PF00270.29	1.9e-06	1	1
ENSSSCP00000052804	DEAD	PF00270.29	2.2e-06	1	1
ENSSSCP00000048174	DEAD	PF00270.29	2.3e-06	1	1
ENSSSCP00000039541	DEAD	PF00270.29	2.3e-06	1	1
ENSSSCP00000042381	DEAD	PF00270.29	2.5e-06	1	1
ENSSSCP00000051894	HA2	PF04408.23	8.1e-13	1	1
ENSSSCP00000012095	HA2	PF04408.23	8.8e-13	1	1
ENSSSCP00000048492	HA2	PF04408.23	8.8e-13	1	1
ENSSSCP00000052804	HA2	PF04408.23	1.1e-12	1	1
ENSSSCP00000048174	HA2	PF04408.23	1.1e-12	1	1
ENSSSCP00000039541	HA2	PF04408.23	1.1e-12	1	1
ENSSSCP00000042381	HA2	PF04408.23	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000055402	DHX30-204	6881	XM_021070613	ENSSSCP00000042381	1222 (aa)	XP_020926272	A0A287AET0
ENSSSCT00000064344	DHX30-202	6722	XM_003358421	ENSSSCP00000048174	1169 (aa)	XP_003358469	A0A287AVL2
ENSSSCT00000052273	DHX30-207	6681	-	ENSSSCP00000048492	1035 (aa)	-	F1SLI4
ENSSSCT00000012419	DHX30-203	4130	XM_021070620	ENSSSCP00000012095	1035 (aa)	XP_020926279	F1SLI4
ENSSSCT00000055419	DHX30-201	3838	XM_003132174	ENSSSCP00000052804	1162 (aa)	XP_003132222	A0A287B8Z7
ENSSSCT00000060782	DHX30-206	3356	-	ENSSSCP00000051894	1000 (aa)	-	A0A287B707
ENSSSCT00000044267	DHX30-205	6734	XM_013981623	ENSSSCP00000039541	1173 (aa)	XP_013837077	A0A287A6N8

Gene Model

Click here to download ENSSSCG00000011342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000011342	DHX30	69	46.444	ENSSSCG00000026806	DHX9	55	46.352
ENSSSCG00000011342	DHX30	71	47.236	ENSSSCG00000014211	YTHDC2	51	47.236
ENSSSCG00000011342	DHX30	65	47.000	ENSSSCG00000024916	DHX36	79	37.297
ENSSSCG00000011342	DHX30	62	33.433	ENSSSCG00000001376	DHX16	58	33.433
ENSSSCG00000011342	DHX30	68	49.761	ENSSSCG00000016907	DHX29	58	34.954
ENSSSCG00000011342	DHX30	50	32.649	ENSSSCG00000008756	DHX15	73	33.881
ENSSSCG00000011342	DHX30	57	34.934	ENSSSCG00000003114	DHX34	57	34.934
ENSSSCG00000011342	DHX30	53	31.317	ENSSSCG00000039064	DHX33	76	31.317
ENSSSCG00000011342	DHX30	50	32.775	ENSSSCG00000007352	DHX35	73	32.653
ENSSSCG00000011342	DHX30	68	46.377	ENSSSCG00000008479	DHX57	55	39.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011342	DHX30	100	98.068	ENSG00000132153	DHX30	100	98.268	Homo_sapiens
ENSSSCG00000011342	DHX30	98	49.956	ENSAPOG00000023675	dhx30	92	49.410	Acanthochromis_polyacanthus
ENSSSCG00000011342	DHX30	100	98.647	ENSAMEG00000013112	DHX30	98	96.067	Ailuropoda_melanoleuca
ENSSSCG00000011342	DHX30	92	54.110	ENSACIG00000017560	dhx30	89	56.250	Amphilophus_citrinellus
ENSSSCG00000011342	DHX30	93	53.347	ENSAOCG00000021534	-	89	54.149	Amphiprion_ocellaris
ENSSSCG00000011342	DHX30	98	48.873	ENSAOCG00000017807	dhx30	89	49.955	Amphiprion_ocellaris
ENSSSCG00000011342	DHX30	93	50.811	ENSAPEG00000004418	dhx30	88	52.632	Amphiprion_percula
ENSSSCG00000011342	DHX30	98	49.476	ENSATEG00000008254	dhx30	89	50.366	Anabas_testudineus
ENSSSCG00000011342	DHX30	99	76.789	ENSAPLG00000015682	DHX30	99	77.528	Anas_platyrhynchos
ENSSSCG00000011342	DHX30	99	74.958	ENSACAG00000017696	DHX30	99	75.277	Anolis_carolinensis
ENSSSCG00000011342	DHX30	100	98.375	ENSANAG00000024810	DHX30	100	98.365	Aotus_nancymaae
ENSSSCG00000011342	DHX30	93	53.455	ENSACLG00000020306	dhx30	89	54.497	Astatotilapia_calliptera
ENSSSCG00000011342	DHX30	97	50.131	ENSAMXG00000014791	dhx30	84	55.892	Astyanax_mexicanus
ENSSSCG00000011342	DHX30	100	98.888	ENSBTAG00000015833	DHX30	100	98.888	Bos_taurus
ENSSSCG00000011342	DHX30	100	98.289	ENSCJAG00000002635	DHX30	100	98.279	Callithrix_jacchus
ENSSSCG00000011342	DHX30	100	98.744	ENSCAFG00000013038	DHX30	100	98.036	Canis_familiaris
ENSSSCG00000011342	DHX30	100	98.881	ENSCAFG00020020245	DHX30	100	98.881	Canis_lupus_dingo
ENSSSCG00000011342	DHX30	100	98.357	ENSCHIG00000017619	DHX30	100	97.300	Capra_hircus
ENSSSCG00000011342	DHX30	100	97.585	ENSTSYG00000005093	DHX30	100	97.835	Carlito_syrichta
ENSSSCG00000011342	DHX30	100	92.374	ENSCAPG00000011764	DHX30	98	92.379	Cavia_aperea
ENSSSCG00000011342	DHX30	100	97.201	ENSCPOG00000000699	DHX30	99	96.122	Cavia_porcellus
ENSSSCG00000011342	DHX30	100	98.261	ENSCCAG00000032718	DHX30	100	98.442	Cebus_capucinus
ENSSSCG00000011342	DHX30	100	98.261	ENSCATG00000043684	DHX30	100	98.442	Cercocebus_atys
ENSSSCG00000011342	DHX30	100	97.101	ENSCLAG00000014660	DHX30	98	97.248	Chinchilla_lanigera
ENSSSCG00000011342	DHX30	100	98.460	ENSCSAG00000015968	DHX30	100	98.460	Chlorocebus_sabaeus
ENSSSCG00000011342	DHX30	100	92.560	ENSCHOG00000002900	DHX30	100	90.704	Choloepus_hoffmanni
ENSSSCG00000011342	DHX30	99	75.997	ENSCPBG00000015231	DHX30	99	77.187	Chrysemys_picta_bellii
ENSSSCG00000011342	DHX30	100	98.261	ENSCANG00000007441	DHX30	100	95.238	Colobus_angolensis_palliatus
ENSSSCG00000011342	DHX30	100	97.874	ENSCGRG00001014229	Dhx30	98	98.022	Cricetulus_griseus_chok1gshd
ENSSSCG00000011342	DHX30	100	97.874	ENSCGRG00000017808	Dhx30	98	98.022	Cricetulus_griseus_crigri
ENSSSCG00000011342	DHX30	99	48.601	ENSCSEG00000009744	dhx30	87	49.348	Cynoglossus_semilaevis
ENSSSCG00000011342	DHX30	92	53.501	ENSCVAG00000006410	dhx30	92	55.706	Cyprinodon_variegatus
ENSSSCG00000011342	DHX30	97	48.999	ENSDARG00000077839	dhx30	89	54.131	Danio_rerio
ENSSSCG00000011342	DHX30	100	92.174	ENSDNOG00000018833	DHX30	98	90.150	Dasypus_novemcinctus
ENSSSCG00000011342	DHX30	100	98.357	ENSDORG00000028764	Dhx30	98	98.538	Dipodomys_ordii
ENSSSCG00000011342	DHX30	94	44.926	ENSEBUG00000016505	dhx30	84	51.667	Eptatretus_burgeri
ENSSSCG00000011342	DHX30	100	98.647	ENSEASG00005008553	DHX30	100	98.600	Equus_asinus_asinus
ENSSSCG00000011342	DHX30	100	98.888	ENSECAG00000015670	DHX30	100	98.888	Equus_caballus
ENSSSCG00000011342	DHX30	78	96.144	ENSEEUG00000010045	DHX30	81	96.144	Erinaceus_europaeus
ENSSSCG00000011342	DHX30	97	53.196	ENSELUG00000020943	dhx30	90	51.499	Esox_lucius
ENSSSCG00000011342	DHX30	100	98.647	ENSFCAG00000000438	DHX30	100	98.788	Felis_catus
ENSSSCG00000011342	DHX30	99	76.890	ENSFALG00000002009	DHX30	99	77.121	Ficedula_albicollis
ENSSSCG00000011342	DHX30	100	96.715	ENSFDAG00000007132	DHX30	100	96.730	Fukomys_damarensis
ENSSSCG00000011342	DHX30	92	51.447	ENSFHEG00000014172	dhx30	86	55.946	Fundulus_heteroclitus
ENSSSCG00000011342	DHX30	78	55.653	ENSGMOG00000008538	dhx30	80	57.686	Gadus_morhua
ENSSSCG00000011342	DHX30	99	76.818	ENSGALG00000039830	DHX30	99	76.949	Gallus_gallus
ENSSSCG00000011342	DHX30	94	53.381	ENSGAFG00000021403	dhx30	88	54.428	Gambusia_affinis
ENSSSCG00000011342	DHX30	98	50.131	ENSGACG00000017828	dhx30	87	54.796	Gasterosteus_aculeatus
ENSSSCG00000011342	DHX30	98	77.923	ENSGAGG00000008495	DHX30	99	77.923	Gopherus_agassizii
ENSSSCG00000011342	DHX30	100	98.365	ENSGGOG00000004307	DHX30	100	98.365	Gorilla_gorilla
ENSSSCG00000011342	DHX30	93	53.557	ENSHBUG00000006060	dhx30	92	54.497	Haplochromis_burtoni
ENSSSCG00000011342	DHX30	100	96.039	ENSHGLG00000012643	DHX30	99	94.959	Heterocephalus_glaber_female
ENSSSCG00000011342	DHX30	100	95.367	ENSHGLG00100011194	DHX30	98	95.615	Heterocephalus_glaber_male
ENSSSCG00000011342	DHX30	92	54.876	ENSHCOG00000018612	dhx30	89	55.844	Hippocampus_comes
ENSSSCG00000011342	DHX30	98	50.304	ENSIPUG00000012285	dhx30	92	50.757	Ictalurus_punctatus
ENSSSCG00000011342	DHX30	100	98.454	ENSSTOG00000022367	DHX30	100	97.054	Ictidomys_tridecemlineatus
ENSSSCG00000011342	DHX30	100	97.778	ENSJJAG00000007025	-	98	97.778	Jaculus_jaculus
ENSSSCG00000011342	DHX30	95	53.717	ENSKMAG00000015124	dhx30	90	54.475	Kryptolebias_marmoratus
ENSSSCG00000011342	DHX30	98	49.259	ENSLBEG00000016705	dhx30	88	55.000	Labrus_bergylta
ENSSSCG00000011342	DHX30	76	64.141	ENSLACG00000009404	DHX30	96	64.240	Latimeria_chalumnae
ENSSSCG00000011342	DHX30	98	55.448	ENSLOCG00000010283	dhx30	98	55.340	Lepisosteus_oculatus
ENSSSCG00000011342	DHX30	100	97.005	ENSLAFG00000028880	DHX30	100	96.357	Loxodonta_africana
ENSSSCG00000011342	DHX30	100	98.261	ENSMFAG00000033894	DHX30	100	98.442	Macaca_fascicularis
ENSSSCG00000011342	DHX30	100	98.460	ENSMMUG00000003820	DHX30	100	98.460	Macaca_mulatta
ENSSSCG00000011342	DHX30	100	98.261	ENSMNEG00000035478	DHX30	100	98.442	Macaca_nemestrina
ENSSSCG00000011342	DHX30	100	98.068	ENSMLEG00000023203	DHX30	100	98.268	Mandrillus_leucophaeus
ENSSSCG00000011342	DHX30	98	50.390	ENSMAMG00000014611	dhx30	85	55.960	Mastacembelus_armatus
ENSSSCG00000011342	DHX30	93	53.455	ENSMZEG00005025092	dhx30	89	54.497	Maylandia_zebra
ENSSSCG00000011342	DHX30	98	75.414	ENSMGAG00000001216	DHX30	100	75.414	Meleagris_gallopavo
ENSSSCG00000011342	DHX30	100	97.585	ENSMAUG00000021404	Dhx30	98	97.764	Mesocricetus_auratus
ENSSSCG00000011342	DHX30	100	97.681	ENSMICG00000008784	DHX30	100	97.922	Microcebus_murinus
ENSSSCG00000011342	DHX30	100	97.778	ENSMOCG00000009984	Dhx30	99	97.355	Microtus_ochrogaster
ENSSSCG00000011342	DHX30	90	55.209	ENSMMOG00000016828	dhx30	91	55.605	Mola_mola
ENSSSCG00000011342	DHX30	100	94.396	ENSMODG00000014285	DHX30	99	92.471	Monodelphis_domestica
ENSSSCG00000011342	DHX30	93	52.778	ENSMALG00000020479	dhx30	87	53.796	Monopterus_albus
ENSSSCG00000011342	DHX30	100	97.681	MGP_CAROLIEiJ_G0032725	Dhx30	100	96.402	Mus_caroli
ENSSSCG00000011342	DHX30	100	97.681	ENSMUSG00000032480	Dhx30	99	97.355	Mus_musculus
ENSSSCG00000011342	DHX30	100	97.778	MGP_PahariEiJ_G0015592	Dhx30	100	95.394	Mus_pahari
ENSSSCG00000011342	DHX30	100	97.585	MGP_SPRETEiJ_G0033873	Dhx30	100	95.230	Mus_spretus
ENSSSCG00000011342	DHX30	100	98.647	ENSMPUG00000015013	DHX30	100	96.147	Mustela_putorius_furo
ENSSSCG00000011342	DHX30	100	98.164	ENSNGAG00000023148	Dhx30	100	96.972	Nannospalax_galili
ENSSSCG00000011342	DHX30	92	54.450	ENSNBRG00000012539	dhx30	89	55.470	Neolamprologus_brichardi
ENSSSCG00000011342	DHX30	93	96.315	ENSNLEG00000006367	DHX30	100	95.229	Nomascus_leucogenys
ENSSSCG00000011342	DHX30	100	94.396	ENSMEUG00000002926	DHX30	100	92.462	Notamacropus_eugenii
ENSSSCG00000011342	DHX30	100	97.585	ENSOPRG00000017190	DHX30	100	95.226	Ochotona_princeps
ENSSSCG00000011342	DHX30	91	75.612	ENSODEG00000007220	-	94	74.836	Octodon_degus
ENSSSCG00000011342	DHX30	100	96.715	ENSODEG00000012770	-	98	96.802	Octodon_degus
ENSSSCG00000011342	DHX30	98	49.956	ENSONIG00000009631	dhx30	95	51.184	Oreochromis_niloticus
ENSSSCG00000011342	DHX30	100	81.485	ENSOANG00000010513	-	99	81.558	Ornithorhynchus_anatinus
ENSSSCG00000011342	DHX30	100	97.874	ENSOCUG00000006515	DHX30	100	97.136	Oryctolagus_cuniculus
ENSSSCG00000011342	DHX30	98	49.520	ENSORLG00000017276	dhx30	86	54.536	Oryzias_latipes
ENSSSCG00000011342	DHX30	98	49.432	ENSORLG00020010224	dhx30	86	54.705	Oryzias_latipes_hni
ENSSSCG00000011342	DHX30	98	49.433	ENSORLG00015010148	dhx30	86	54.803	Oryzias_latipes_hsok
ENSSSCG00000011342	DHX30	98	48.569	ENSOMEG00000005351	dhx30	89	49.547	Oryzias_melastigma
ENSSSCG00000011342	DHX30	100	97.971	ENSOGAG00000012526	DHX30	100	97.218	Otolemur_garnettii
ENSSSCG00000011342	DHX30	81	99.053	ENSOARG00000002897	DHX30	99	99.053	Ovis_aries
ENSSSCG00000011342	DHX30	100	98.068	ENSPPAG00000034330	DHX30	100	95.678	Pan_paniscus
ENSSSCG00000011342	DHX30	100	98.647	ENSPPRG00000022811	DHX30	100	98.788	Panthera_pardus
ENSSSCG00000011342	DHX30	93	95.911	ENSPTIG00000015582	DHX30	94	95.918	Panthera_tigris_altaica
ENSSSCG00000011342	DHX30	100	98.068	ENSPTRG00000014877	DHX30	100	98.268	Pan_troglodytes
ENSSSCG00000011342	DHX30	100	97.203	ENSPANG00000014291	DHX30	98	97.489	Papio_anubis
ENSSSCG00000011342	DHX30	92	55.992	ENSPKIG00000000741	dhx30	89	57.430	Paramormyrops_kingsleyae
ENSSSCG00000011342	DHX30	99	66.359	ENSPSIG00000011740	DHX30	99	66.112	Pelodiscus_sinensis
ENSSSCG00000011342	DHX30	100	97.488	ENSPEMG00000014177	Dhx30	98	97.506	Peromyscus_maniculatus_bairdii
ENSSSCG00000011342	DHX30	98	46.088	ENSPMAG00000001958	dhx30	100	46.174	Petromyzon_marinus
ENSSSCG00000011342	DHX30	100	94.589	ENSPCIG00000013492	DHX30	95	92.471	Phascolarctos_cinereus
ENSSSCG00000011342	DHX30	59	56.449	ENSPFOG00000015329	dhx30	89	56.449	Poecilia_formosa
ENSSSCG00000011342	DHX30	91	53.952	ENSPMEG00000022750	dhx30	87	55.345	Poecilia_mexicana
ENSSSCG00000011342	DHX30	92	53.910	ENSPREG00000010021	dhx30	90	55.336	Poecilia_reticulata
ENSSSCG00000011342	DHX30	100	98.261	ENSPPYG00000013914	DHX30	100	95.725	Pongo_abelii
ENSSSCG00000011342	DHX30	77	97.822	ENSPCAG00000002209	DHX30	70	100.000	Procavia_capensis
ENSSSCG00000011342	DHX30	100	98.068	ENSPCOG00000025552	DHX30	100	98.182	Propithecus_coquereli
ENSSSCG00000011342	DHX30	99	97.451	ENSPVAG00000010183	DHX30	100	95.081	Pteropus_vampyrus
ENSSSCG00000011342	DHX30	92	54.346	ENSPNYG00000014217	dhx30	82	55.470	Pundamilia_nyererei
ENSSSCG00000011342	DHX30	94	53.554	ENSPNAG00000002192	dhx30	92	54.415	Pygocentrus_nattereri
ENSSSCG00000011342	DHX30	100	97.861	ENSRNOG00000029194	Dhx30	100	97.861	Rattus_norvegicus
ENSSSCG00000011342	DHX30	100	98.261	ENSRBIG00000034012	DHX30	100	95.238	Rhinopithecus_bieti
ENSSSCG00000011342	DHX30	100	98.261	ENSRROG00000039143	DHX30	100	98.442	Rhinopithecus_roxellana
ENSSSCG00000011342	DHX30	100	98.164	ENSSBOG00000035810	DHX30	100	95.181	Saimiri_boliviensis_boliviensis
ENSSSCG00000011342	DHX30	100	94.589	ENSSHAG00000006980	DHX30	100	92.630	Sarcophilus_harrisii
ENSSSCG00000011342	DHX30	93	54.757	ENSSFOG00015018714	dhx30	86	55.593	Scleropages_formosus
ENSSSCG00000011342	DHX30	92	53.292	ENSSMAG00000020068	dhx30	89	49.863	Scophthalmus_maximus
ENSSSCG00000011342	DHX30	98	49.957	ENSSDUG00000019188	dhx30	92	49.520	Seriola_dumerili
ENSSSCG00000011342	DHX30	93	50.779	ENSSLDG00000008176	dhx30	98	50.643	Seriola_lalandi_dorsalis
ENSSSCG00000011342	DHX30	99	76.068	ENSSPUG00000019160	DHX30	98	75.593	Sphenodon_punctatus
ENSSSCG00000011342	DHX30	98	50.043	ENSSPAG00000022184	dhx30	86	54.396	Stegastes_partitus
ENSSSCG00000011342	DHX30	98	77.913	ENSTGUG00000000112	-	99	78.087	Taeniopygia_guttata
ENSSSCG00000011342	DHX30	98	47.110	ENSTRUG00000011263	dhx30	91	52.222	Takifugu_rubripes
ENSSSCG00000011342	DHX30	85	62.626	ENSTRUG00000020111	DHX30	91	62.626	Takifugu_rubripes
ENSSSCG00000011342	DHX30	98	49.567	ENSTNIG00000008523	dhx30	90	55.629	Tetraodon_nigroviridis
ENSSSCG00000011342	DHX30	100	98.647	ENSTTRG00000002314	DHX30	100	96.147	Tursiops_truncatus
ENSSSCG00000011342	DHX30	93	98.861	ENSUAMG00000017241	DHX30	100	98.861	Ursus_americanus
ENSSSCG00000011342	DHX30	90	88.004	ENSUMAG00000001274	DHX30	93	86.840	Ursus_maritimus
ENSSSCG00000011342	DHX30	94	98.168	ENSVVUG00000029792	DHX30	89	97.580	Vulpes_vulpes
ENSSSCG00000011342	DHX30	99	57.686	ENSXETG00000004213	dhx30	98	57.524	Xenopus_tropicalis
ENSSSCG00000011342	DHX30	95	52.769	ENSXCOG00000015021	dhx30	91	54.234	Xiphophorus_couchianus
ENSSSCG00000011342	DHX30	98	49.869	ENSXMAG00000016336	dhx30	85	55.234	Xiphophorus_maculatus