EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000011394 (Gene tree)
Gene ID: 100515053
Gene Symbol: RBM6
Alias: 3G2|DEF-3|DEF3|NY-LU-12|g16
Full Name: RNA binding motif protein 6
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 144393 bases
Position: chr13:32445015-32589407
Accession: 100515053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000046622	G-patch	PF01585.23	1.9e-05	1	1
ENSSSCP00000039047	G-patch	PF01585.23	2.5e-05	1	1
ENSSSCP00000012147	G-patch	PF01585.23	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000012472	RBM6-201	4386	XM_003483187	ENSSSCP00000012147	1120 (aa)	XP_003483235	F1SPQ9
ENSSSCT00000036734	RBM6-202	3282	-	ENSSSCP00000039047	1071 (aa)	-	A0A287A5G7
ENSSSCT00000057165	RBM6-203	2763	-	ENSSSCP00000046622	898 (aa)	-	A0A287ART6

Gene Model

Click here to download ENSSSCG00000011394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000011394	RBM6	79	33.957	ENSSSCG00000012271	RBM10	71	34.218
ENSSSCG00000011394	RBM6	64	36.605	ENSSSCG00000011395	RBM5	73	35.092

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011394	RBM6	100	93.767	ENSG00000004534	RBM6	100	97.368	Homo_sapiens
ENSSSCG00000011394	RBM6	100	93.672	ENSAMEG00000012049	RBM6	100	93.672	Ailuropoda_melanoleuca
ENSSSCG00000011394	RBM6	100	57.890	ENSAPLG00000003536	RBM6	100	58.650	Anas_platyrhynchos
ENSSSCG00000011394	RBM6	100	53.605	ENSACAG00000008480	RBM6	100	53.937	Anolis_carolinensis
ENSSSCG00000011394	RBM6	100	92.959	ENSANAG00000037161	RBM6	100	92.959	Aotus_nancymaae
ENSSSCG00000011394	RBM6	100	92.959	ENSBTAG00000006328	RBM6	100	92.959	Bos_taurus
ENSSSCG00000011394	RBM6	100	93.405	ENSCJAG00000004620	RBM6	100	93.424	Callithrix_jacchus
ENSSSCG00000011394	RBM6	100	93.137	ENSCAFG00000010914	RBM6	100	93.850	Canis_familiaris
ENSSSCG00000011394	RBM6	100	93.137	ENSCAFG00020022120	RBM6	100	93.850	Canis_lupus_dingo
ENSSSCG00000011394	RBM6	100	93.048	ENSCHIG00000007341	RBM6	100	93.048	Capra_hircus
ENSSSCG00000011394	RBM6	96	92.414	ENSTSYG00000012969	RBM6	100	92.414	Carlito_syrichta
ENSSSCG00000011394	RBM6	99	89.982	ENSCPOG00000008146	RBM6	100	89.982	Cavia_porcellus
ENSSSCG00000011394	RBM6	100	93.505	ENSCATG00000032064	RBM6	100	93.505	Cercocebus_atys
ENSSSCG00000011394	RBM6	100	90.472	ENSCLAG00000012000	RBM6	100	90.472	Chinchilla_lanigera
ENSSSCG00000011394	RBM6	52	58.887	ENSCPBG00000002465	-	100	58.458	Chrysemys_picta_bellii
ENSSSCG00000011394	RBM6	92	91.946	ENSCANG00000043615	RBM6	100	91.946	Colobus_angolensis_palliatus
ENSSSCG00000011394	RBM6	100	91.378	ENSDNOG00000011746	RBM6	100	91.378	Dasypus_novemcinctus
ENSSSCG00000011394	RBM6	97	89.506	ENSDORG00000004146	-	100	89.506	Dipodomys_ordii
ENSSSCG00000011394	RBM6	100	81.656	ENSETEG00000012770	RBM6	100	81.656	Echinops_telfairi
ENSSSCG00000011394	RBM6	100	94.479	ENSEASG00005011832	RBM6	100	94.479	Equus_asinus_asinus
ENSSSCG00000011394	RBM6	100	94.479	ENSECAG00000015226	RBM6	100	94.479	Equus_caballus
ENSSSCG00000011394	RBM6	100	94.123	ENSFCAG00000014634	RBM6	100	94.123	Felis_catus
ENSSSCG00000011394	RBM6	100	57.895	ENSFALG00000008967	RBM6	100	56.373	Ficedula_albicollis
ENSSSCG00000011394	RBM6	100	90.917	ENSFDAG00000014451	RBM6	100	90.917	Fukomys_damarensis
ENSSSCG00000011394	RBM6	100	56.485	ENSGALG00000035578	RBM6	100	58.153	Gallus_gallus
ENSSSCG00000011394	RBM6	97	91.657	ENSGGOG00000014459	RBM6	100	93.677	Gorilla_gorilla
ENSSSCG00000011394	RBM6	52	77.849	ENSHGLG00000005755	-	100	79.355	Heterocephalus_glaber_female
ENSSSCG00000011394	RBM6	100	90.205	ENSHGLG00000013189	-	100	90.205	Heterocephalus_glaber_female
ENSSSCG00000011394	RBM6	100	90.561	ENSHGLG00100012994	-	100	90.561	Heterocephalus_glaber_male
ENSSSCG00000011394	RBM6	100	90.917	ENSSTOG00000002392	RBM6	100	90.917	Ictidomys_tridecemlineatus
ENSSSCG00000011394	RBM6	96	88.295	ENSJJAG00000016774	Rbm6	100	88.295	Jaculus_jaculus
ENSSSCG00000011394	RBM6	96	91.726	ENSLAFG00000006727	RBM6	100	91.726	Loxodonta_africana
ENSSSCG00000011394	RBM6	97	91.324	ENSMMUG00000003494	RBM6	100	93.145	Macaca_mulatta
ENSSSCG00000011394	RBM6	64	93.103	ENSMLEG00000032642	RBM6	100	93.103	Mandrillus_leucophaeus
ENSSSCG00000011394	RBM6	99	58.684	ENSMGAG00000002602	RBM6	100	59.123	Meleagris_gallopavo
ENSSSCG00000011394	RBM6	100	92.965	ENSMICG00000016174	RBM6	100	92.965	Microcebus_murinus
ENSSSCG00000011394	RBM6	100	79.076	ENSMODG00000012312	RBM6	100	78.814	Monodelphis_domestica
ENSSSCG00000011394	RBM6	100	87.344	ENSMPUG00000013269	RBM6	100	87.344	Mustela_putorius_furo
ENSSSCG00000011394	RBM6	96	88.295	ENSNGAG00000015804	Rbm6	100	88.295	Nannospalax_galili
ENSSSCG00000011394	RBM6	100	91.808	ENSNLEG00000006932	RBM6	100	91.808	Nomascus_leucogenys
ENSSSCG00000011394	RBM6	96	80.025	ENSMEUG00000006081	RBM6	94	80.220	Notamacropus_eugenii
ENSSSCG00000011394	RBM6	100	82.191	ENSOPRG00000015113	RBM6	100	82.191	Ochotona_princeps
ENSSSCG00000011394	RBM6	100	91.184	ENSOCUG00000011638	RBM6	100	91.184	Oryctolagus_cuniculus
ENSSSCG00000011394	RBM6	100	92.781	ENSOARG00000011125	RBM6	100	92.781	Ovis_aries
ENSSSCG00000011394	RBM6	99	93.863	ENSPPAG00000034940	RBM6	100	93.863	Pan_paniscus
ENSSSCG00000011394	RBM6	100	94.212	ENSPPRG00000006572	RBM6	100	94.212	Panthera_pardus
ENSSSCG00000011394	RBM6	100	94.301	ENSPTIG00000000403	RBM6	100	94.301	Panthera_tigris_altaica
ENSSSCG00000011394	RBM6	97	91.657	ENSPTRG00000014943	RBM6	100	93.677	Pan_troglodytes
ENSSSCG00000011394	RBM6	100	93.594	ENSPANG00000012436	RBM6	100	93.594	Papio_anubis
ENSSSCG00000011394	RBM6	97	75.196	ENSPCIG00000021533	RBM6	99	77.746	Phascolarctos_cinereus
ENSSSCG00000011394	RBM6	100	90.917	ENSPPYG00000013855	RBM6	100	90.917	Pongo_abelii
ENSSSCG00000011394	RBM6	99	96.117	ENSPCAG00000005277	RBM6	94	96.117	Procavia_capensis
ENSSSCG00000011394	RBM6	100	93.054	ENSPCOG00000014743	RBM6	100	93.054	Propithecus_coquereli
ENSSSCG00000011394	RBM6	100	93.500	ENSPVAG00000006811	RBM6	100	93.500	Pteropus_vampyrus
ENSSSCG00000011394	RBM6	99	92.973	ENSRBIG00000030131	RBM6	100	92.973	Rhinopithecus_bieti
ENSSSCG00000011394	RBM6	100	93.143	ENSRROG00000029411	RBM6	100	93.143	Rhinopithecus_roxellana
ENSSSCG00000011394	RBM6	91	92.389	ENSSBOG00000010277	-	100	92.389	Saimiri_boliviensis_boliviensis
ENSSSCG00000011394	RBM6	100	78.196	ENSSHAG00000018151	RBM6	100	77.933	Sarcophilus_harrisii
ENSSSCG00000011394	RBM6	99	57.329	ENSSPUG00000001946	RBM6	98	57.835	Sphenodon_punctatus
ENSSSCG00000011394	RBM6	100	57.305	ENSTGUG00000004964	RBM6	100	57.568	Taeniopygia_guttata
ENSSSCG00000011394	RBM6	97	89.956	ENSTBEG00000003847	RBM6	93	89.956	Tupaia_belangeri
ENSSSCG00000011394	RBM6	99	92.692	ENSTTRG00000007713	RBM6	100	92.692	Tursiops_truncatus
ENSSSCG00000011394	RBM6	69	87.981	ENSUAMG00000028346	RBM6	96	93.651	Ursus_americanus
ENSSSCG00000011394	RBM6	100	94.029	ENSUMAG00000022039	RBM6	100	94.029	Ursus_maritimus
ENSSSCG00000011394	RBM6	100	92.959	ENSVVUG00000028652	RBM6	100	93.672	Vulpes_vulpes
ENSSSCG00000011394	RBM6	95	35.646	ENSXETG00000007303	rbm5	100	36.538	Xenopus_tropicalis