EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000011449 (Gene tree)
Gene ID: 100155235
Gene Symbol: GNL3
Alias: C77032|E2IG3|MGC800|NS
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 11040 bases
Position: chr13:34820206-34831245
Accession: 100155235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000012201	GN3L_Grn1	PF08701.11	4.7e-21	1	1
ENSSSCP00000057970	GN3L_Grn1	PF08701.11	4.7e-21	1	1
ENSSSCP00000012201	MMR_HSR1	PF01926.23	1.6e-13	1	1
ENSSSCP00000057970	MMR_HSR1	PF01926.23	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000012529	GNL3-201	2078	XM_001928454	ENSSSCP00000012201	548 (aa)	XP_001928489	F1SH97
ENSSSCT00000037957	GNL3-202	4958	XM_005669638	ENSSSCP00000057970	548 (aa)	XP_005669695	F1SH97

Gene Model

Click here to download ENSSSCG00000011449's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000011449	GNL3	74	38.152	ENSSSCG00000012336	GNL3L	71	38.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011449	GNL3	99	79.673	ENSG00000163938	GNL3	93	89.888	Homo_sapiens
ENSSSCG00000011449	GNL3	99	43.316	ENSAPOG00000004048	gnl3	99	43.110	Acanthochromis_polyacanthus
ENSSSCG00000011449	GNL3	99	83.485	ENSAMEG00000008456	GNL3	100	83.122	Ailuropoda_melanoleuca
ENSSSCG00000011449	GNL3	99	42.832	ENSACIG00000000545	gnl3	99	42.011	Amphilophus_citrinellus
ENSSSCG00000011449	GNL3	99	43.316	ENSAOCG00000012879	gnl3	99	42.959	Amphiprion_ocellaris
ENSSSCG00000011449	GNL3	99	43.494	ENSAPEG00000006146	gnl3	99	42.657	Amphiprion_percula
ENSSSCG00000011449	GNL3	99	45.167	ENSATEG00000024242	gnl3	99	44.991	Anabas_testudineus
ENSSSCG00000011449	GNL3	96	48.327	ENSAPLG00000005171	GNL3	100	48.052	Anas_platyrhynchos
ENSSSCG00000011449	GNL3	99	50.000	ENSACAG00000007357	GNL3	100	50.179	Anolis_carolinensis
ENSSSCG00000011449	GNL3	99	78.221	ENSANAG00000033209	GNL3	100	78.040	Aotus_nancymaae
ENSSSCG00000011449	GNL3	85	47.490	ENSACLG00000007381	gnl3	99	43.316	Astatotilapia_calliptera
ENSSSCG00000011449	GNL3	99	43.972	ENSAMXG00000020880	gnl3	100	43.894	Astyanax_mexicanus
ENSSSCG00000011449	GNL3	99	80.109	ENSBTAG00000014549	GNL3	100	81.204	Bos_taurus
ENSSSCG00000011449	GNL3	99	77.677	ENSCJAG00000044256	-	100	77.495	Callithrix_jacchus
ENSSSCG00000011449	GNL3	99	77.677	ENSCJAG00000006864	-	100	77.495	Callithrix_jacchus
ENSSSCG00000011449	GNL3	99	80.581	ENSCAFG00000009004	GNL3	100	80.036	Canis_familiaris
ENSSSCG00000011449	GNL3	93	81.165	ENSCAFG00020002613	GNL3	98	80.583	Canis_lupus_dingo
ENSSSCG00000011449	GNL3	99	82.117	ENSCHIG00000022181	GNL3	100	82.117	Capra_hircus
ENSSSCG00000011449	GNL3	99	77.007	ENSTSYG00000006851	GNL3	100	77.737	Carlito_syrichta
ENSSSCG00000011449	GNL3	99	70.545	ENSCPOG00000000282	GNL3	100	70.545	Cavia_porcellus
ENSSSCG00000011449	GNL3	99	77.314	ENSCCAG00000033281	GNL3	100	77.132	Cebus_capucinus
ENSSSCG00000011449	GNL3	99	78.947	ENSCATG00000040886	GNL3	100	78.766	Cercocebus_atys
ENSSSCG00000011449	GNL3	99	75.407	ENSCLAG00000010109	-	100	75.769	Chinchilla_lanigera
ENSSSCG00000011449	GNL3	99	79.529	ENSCSAG00000013315	GNL3	100	79.348	Chlorocebus_sabaeus
ENSSSCG00000011449	GNL3	99	76.344	ENSCHOG00000002726	GNL3	100	75.986	Choloepus_hoffmanni
ENSSSCG00000011449	GNL3	75	51.869	ENSCPBG00000018330	-	95	52.693	Chrysemys_picta_bellii
ENSSSCG00000011449	GNL3	98	78.479	ENSCANG00000039969	GNL3	100	78.293	Colobus_angolensis_palliatus
ENSSSCG00000011449	GNL3	99	72.578	ENSCGRG00001020950	Gnl3	100	72.578	Cricetulus_griseus_chok1gshd
ENSSSCG00000011449	GNL3	99	72.578	ENSCGRG00000015225	Gnl3	100	72.578	Cricetulus_griseus_crigri
ENSSSCG00000011449	GNL3	85	47.059	ENSCSEG00000005009	gnl3	87	46.639	Cynoglossus_semilaevis
ENSSSCG00000011449	GNL3	99	43.292	ENSCVAG00000010679	gnl3	99	43.137	Cyprinodon_variegatus
ENSSSCG00000011449	GNL3	99	44.248	ENSDARG00000006219	gnl3	100	43.540	Danio_rerio
ENSSSCG00000011449	GNL3	99	78.119	ENSDNOG00000001037	GNL3	100	78.119	Dasypus_novemcinctus
ENSSSCG00000011449	GNL3	99	73.175	ENSDORG00000000674	Gnl3	100	73.358	Dipodomys_ordii
ENSSSCG00000011449	GNL3	88	91.429	ENSETEG00000016534	-	88	91.429	Echinops_telfairi
ENSSSCG00000011449	GNL3	99	83.303	ENSEASG00005014636	GNL3	100	82.759	Equus_asinus_asinus
ENSSSCG00000011449	GNL3	99	84.153	ENSECAG00000014850	GNL3	100	83.607	Equus_caballus
ENSSSCG00000011449	GNL3	99	72.993	ENSEEUG00000004427	GNL3	100	72.578	Erinaceus_europaeus
ENSSSCG00000011449	GNL3	99	44.834	ENSELUG00000008767	gnl3	99	45.009	Esox_lucius
ENSSSCG00000011449	GNL3	99	82.396	ENSFCAG00000015719	GNL3	100	82.577	Felis_catus
ENSSSCG00000011449	GNL3	99	50.177	ENSFALG00000008957	GNL3	99	51.351	Ficedula_albicollis
ENSSSCG00000011449	GNL3	99	72.943	ENSFDAG00000020679	GNL3	100	72.943	Fukomys_damarensis
ENSSSCG00000011449	GNL3	99	44.050	ENSFHEG00000020897	gnl3	99	43.772	Fundulus_heteroclitus
ENSSSCG00000011449	GNL3	99	39.437	ENSGMOG00000001745	gnl3	99	39.261	Gadus_morhua
ENSSSCG00000011449	GNL3	99	50.613	ENSGALG00000001613	GNL3	100	50.613	Gallus_gallus
ENSSSCG00000011449	GNL3	99	39.060	ENSGAFG00000007184	gnl3	99	38.819	Gambusia_affinis
ENSSSCG00000011449	GNL3	99	42.583	ENSGACG00000000309	gnl3	99	42.408	Gasterosteus_aculeatus
ENSSSCG00000011449	GNL3	79	52.328	ENSGAGG00000021579	-	97	52.620	Gopherus_agassizii
ENSSSCG00000011449	GNL3	99	79.310	ENSGGOG00000011444	GNL3	100	79.129	Gorilla_gorilla
ENSSSCG00000011449	GNL3	85	48.233	ENSHBUG00000001340	gnl3	99	44.876	Haplochromis_burtoni
ENSSSCG00000011449	GNL3	99	76.825	ENSHGLG00000018299	GNL3	99	76.825	Heterocephalus_glaber_female
ENSSSCG00000011449	GNL3	99	40.177	ENSHCOG00000009446	gnl3	99	40.250	Hippocampus_comes
ENSSSCG00000011449	GNL3	99	42.626	ENSIPUG00000023677	gnl3	99	43.986	Ictalurus_punctatus
ENSSSCG00000011449	GNL3	99	77.372	ENSSTOG00000000356	GNL3	100	77.372	Ictidomys_tridecemlineatus
ENSSSCG00000011449	GNL3	99	72.943	ENSJJAG00000021993	Gnl3	100	72.578	Jaculus_jaculus
ENSSSCG00000011449	GNL3	99	42.883	ENSKMAG00000005965	gnl3	99	42.527	Kryptolebias_marmoratus
ENSSSCG00000011449	GNL3	99	43.186	ENSLBEG00000011394	gnl3	99	42.655	Labrus_bergylta
ENSSSCG00000011449	GNL3	99	50.353	ENSLACG00000001259	GNL3	100	50.794	Latimeria_chalumnae
ENSSSCG00000011449	GNL3	85	47.609	ENSLOCG00000010542	gnl3	99	43.772	Lepisosteus_oculatus
ENSSSCG00000011449	GNL3	99	77.437	ENSLAFG00000016056	GNL3	100	76.895	Loxodonta_africana
ENSSSCG00000011449	GNL3	99	77.858	ENSMFAG00000000613	GNL3	100	78.947	Macaca_fascicularis
ENSSSCG00000011449	GNL3	98	77.365	ENSMMUG00000012511	GNL3	100	78.479	Macaca_mulatta
ENSSSCG00000011449	GNL3	98	77.551	ENSMNEG00000041979	GNL3	100	78.664	Macaca_nemestrina
ENSSSCG00000011449	GNL3	99	78.766	ENSMLEG00000027696	GNL3	100	78.584	Mandrillus_leucophaeus
ENSSSCG00000011449	GNL3	99	43.872	ENSMAMG00000008904	gnl3	99	43.694	Mastacembelus_armatus
ENSSSCG00000011449	GNL3	84	44.792	ENSMZEG00005014957	-	99	42.998	Maylandia_zebra
ENSSSCG00000011449	GNL3	85	48.233	ENSMZEG00005014857	gnl3	99	44.876	Maylandia_zebra
ENSSSCG00000011449	GNL3	94	41.250	ENSMGAG00000000848	GNL3	99	40.271	Meleagris_gallopavo
ENSSSCG00000011449	GNL3	99	70.255	ENSMAUG00000020178	Gnl3	100	70.073	Mesocricetus_auratus
ENSSSCG00000011449	GNL3	99	75.181	ENSMICG00000016373	GNL3	100	75.543	Microcebus_murinus
ENSSSCG00000011449	GNL3	99	71.168	ENSMOCG00000018437	Gnl3	100	71.168	Microtus_ochrogaster
ENSSSCG00000011449	GNL3	99	41.187	ENSMMOG00000002815	gnl3	99	41.007	Mola_mola
ENSSSCG00000011449	GNL3	99	58.182	ENSMODG00000011257	GNL3	100	57.377	Monodelphis_domestica
ENSSSCG00000011449	GNL3	95	38.007	ENSMALG00000021043	gnl3	99	37.638	Monopterus_albus
ENSSSCG00000011449	GNL3	99	70.932	MGP_CAROLIEiJ_G0019063	Gnl3	100	70.932	Mus_caroli
ENSSSCG00000011449	GNL3	99	71.115	ENSMUSG00000042354	Gnl3	100	83.673	Mus_musculus
ENSSSCG00000011449	GNL3	99	72.212	MGP_PahariEiJ_G0030080	Gnl3	100	72.212	Mus_pahari
ENSSSCG00000011449	GNL3	99	70.567	MGP_SPRETEiJ_G0019948	Gnl3	100	70.567	Mus_spretus
ENSSSCG00000011449	GNL3	99	81.884	ENSMPUG00000016777	GNL3	100	82.065	Mustela_putorius_furo
ENSSSCG00000011449	GNL3	99	78.545	ENSMLUG00000000728	GNL3	100	78.545	Myotis_lucifugus
ENSSSCG00000011449	GNL3	99	74.135	ENSNGAG00000017202	Gnl3	100	74.135	Nannospalax_galili
ENSSSCG00000011449	GNL3	85	45.532	ENSNBRG00000013161	gnl3	99	42.970	Neolamprologus_brichardi
ENSSSCG00000011449	GNL3	99	79.310	ENSNLEG00000007173	GNL3	100	79.129	Nomascus_leucogenys
ENSSSCG00000011449	GNL3	99	40.441	ENSMEUG00000011502	-	100	42.857	Notamacropus_eugenii
ENSSSCG00000011449	GNL3	79	67.051	ENSOPRG00000009356	GNL3	97	66.822	Ochotona_princeps
ENSSSCG00000011449	GNL3	99	73.732	ENSODEG00000009492	GNL3	100	73.732	Octodon_degus
ENSSSCG00000011449	GNL3	99	44.621	ENSONIG00000019335	gnl3	99	44.858	Oreochromis_niloticus
ENSSSCG00000011449	GNL3	99	54.595	ENSOANG00000013437	GNL3	100	54.301	Ornithorhynchus_anatinus
ENSSSCG00000011449	GNL3	99	74.909	ENSOCUG00000009841	GNL3	100	74.545	Oryctolagus_cuniculus
ENSSSCG00000011449	GNL3	99	44.170	ENSORLG00000016030	gnl3	99	43.772	Oryzias_latipes
ENSSSCG00000011449	GNL3	99	43.972	ENSORLG00020014358	gnl3	99	43.794	Oryzias_latipes_hni
ENSSSCG00000011449	GNL3	99	44.170	ENSORLG00015009489	gnl3	99	43.772	Oryzias_latipes_hsok
ENSSSCG00000011449	GNL3	99	43.617	ENSOMEG00000005462	gnl3	99	43.617	Oryzias_melastigma
ENSSSCG00000011449	GNL3	99	79.603	ENSOGAG00000004101	GNL3	100	79.242	Otolemur_garnettii
ENSSSCG00000011449	GNL3	99	81.013	ENSOARG00000002470	GNL3	100	81.374	Ovis_aries
ENSSSCG00000011449	GNL3	99	79.310	ENSPPAG00000019253	GNL3	100	79.129	Pan_paniscus
ENSSSCG00000011449	GNL3	99	82.214	ENSPPRG00000009550	GNL3	100	82.396	Panthera_pardus
ENSSSCG00000011449	GNL3	99	82.396	ENSPTIG00000009356	GNL3	100	82.577	Panthera_tigris_altaica
ENSSSCG00000011449	GNL3	99	79.310	ENSPTRG00000015009	GNL3	100	79.129	Pan_troglodytes
ENSSSCG00000011449	GNL3	99	75.318	ENSPANG00000016579	GNL3	100	76.407	Papio_anubis
ENSSSCG00000011449	GNL3	99	44.865	ENSPKIG00000024295	gnl3	99	45.586	Paramormyrops_kingsleyae
ENSSSCG00000011449	GNL3	98	53.818	ENSPSIG00000011486	GNL3	100	54.545	Pelodiscus_sinensis
ENSSSCG00000011449	GNL3	84	47.425	ENSPMGG00000008210	gnl3	99	44.007	Periophthalmus_magnuspinnatus
ENSSSCG00000011449	GNL3	99	72.678	ENSPEMG00000017577	Gnl3	100	72.678	Peromyscus_maniculatus_bairdii
ENSSSCG00000011449	GNL3	99	56.102	ENSPCIG00000018642	GNL3	98	57.013	Phascolarctos_cinereus
ENSSSCG00000011449	GNL3	99	43.409	ENSPFOG00000017601	gnl3	99	43.058	Poecilia_formosa
ENSSSCG00000011449	GNL3	99	45.018	ENSPLAG00000016968	gnl3	99	43.850	Poecilia_latipinna
ENSSSCG00000011449	GNL3	99	43.345	ENSPMEG00000018775	gnl3	99	42.986	Poecilia_mexicana
ENSSSCG00000011449	GNL3	99	43.885	ENSPREG00000002909	gnl3	99	42.576	Poecilia_reticulata
ENSSSCG00000011449	GNL3	99	79.024	ENSPPYG00000013800	GNL3	100	78.843	Pongo_abelii
ENSSSCG00000011449	GNL3	80	82.579	ENSPCAG00000002006	GNL3	81	81.900	Procavia_capensis
ENSSSCG00000011449	GNL3	99	79.310	ENSPCOG00000026637	GNL3	100	79.310	Propithecus_coquereli
ENSSSCG00000011449	GNL3	99	81.488	ENSPVAG00000012586	GNL3	100	81.125	Pteropus_vampyrus
ENSSSCG00000011449	GNL3	90	44.423	ENSPNYG00000005130	gnl3	99	42.447	Pundamilia_nyererei
ENSSSCG00000011449	GNL3	99	42.685	ENSPNAG00000013096	gnl3	100	43.608	Pygocentrus_nattereri
ENSSSCG00000011449	GNL3	99	73.675	ENSRNOG00000028461	Gnl3	100	73.675	Rattus_norvegicus
ENSSSCG00000011449	GNL3	99	77.495	ENSRBIG00000031778	GNL3	100	78.584	Rhinopithecus_bieti
ENSSSCG00000011449	GNL3	99	77.495	ENSRROG00000030086	GNL3	100	78.584	Rhinopithecus_roxellana
ENSSSCG00000011449	GNL3	99	77.314	ENSSBOG00000019990	GNL3	100	77.314	Saimiri_boliviensis_boliviensis
ENSSSCG00000011449	GNL3	99	55.556	ENSSHAG00000006141	GNL3	99	55.738	Sarcophilus_harrisii
ENSSSCG00000011449	GNL3	99	44.700	ENSSFOG00015021228	gnl3	99	44.523	Scleropages_formosus
ENSSSCG00000011449	GNL3	99	43.517	ENSSMAG00000006662	gnl3	99	43.162	Scophthalmus_maximus
ENSSSCG00000011449	GNL3	99	43.794	ENSSDUG00000000972	gnl3	99	43.617	Seriola_dumerili
ENSSSCG00000011449	GNL3	99	43.972	ENSSLDG00000008692	gnl3	92	43.794	Seriola_lalandi_dorsalis
ENSSSCG00000011449	GNL3	99	71.795	ENSSARG00000002226	GNL3	99	71.795	Sorex_araneus
ENSSSCG00000011449	GNL3	99	54.336	ENSSPUG00000003582	GNL3	100	54.707	Sphenodon_punctatus
ENSSSCG00000011449	GNL3	99	42.730	ENSSPAG00000020180	gnl3	99	42.553	Stegastes_partitus
ENSSSCG00000011449	GNL3	99	51.630	ENSTGUG00000005774	GNL3	100	51.630	Taeniopygia_guttata
ENSSSCG00000011449	GNL3	99	41.416	ENSTRUG00000005552	gnl3	99	41.093	Takifugu_rubripes
ENSSSCG00000011449	GNL3	99	40.806	ENSTNIG00000007263	gnl3	99	41.053	Tetraodon_nigroviridis
ENSSSCG00000011449	GNL3	97	73.171	ENSTBEG00000017518	GNL3	100	72.983	Tupaia_belangeri
ENSSSCG00000011449	GNL3	62	76.023	ENSTTRG00000008574	-	100	76.316	Tursiops_truncatus
ENSSSCG00000011449	GNL3	99	83.485	ENSUAMG00000012347	GNL3	100	83.122	Ursus_americanus
ENSSSCG00000011449	GNL3	99	83.666	ENSUMAG00000021001	GNL3	100	83.303	Ursus_maritimus
ENSSSCG00000011449	GNL3	53	92.593	ENSVPAG00000007379	-	54	92.593	Vicugna_pacos
ENSSSCG00000011449	GNL3	99	80.403	ENSVVUG00000024536	-	100	83.333	Vulpes_vulpes
ENSSSCG00000011449	GNL3	79	46.637	ENSXCOG00000018425	gnl3	95	47.215	Xiphophorus_couchianus
ENSSSCG00000011449	GNL3	99	45.018	ENSXMAG00000022565	gnl3	99	44.029	Xiphophorus_maculatus