EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000011465 (Gene tree)
Gene ID: 100157651
Gene Symbol: -
Alias: -
Full Name: phosphodiesterase 12
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 39578 bases
Position: chr13:39395533-39435110
Accession: 100157651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000012217	Exo_endo_phos	PF03372.23	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000012546	-	4139	XM_001926462	ENSSSCP00000012217	609 (aa)	XP_001926497	F1SGK9

Gene Model

Click here to download ENSSSCG00000011465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011465's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000011465	-	52	30.000	ENSSSCG00000014009	CNOT6	76	30.000
ENSSSCG00000011465	-	52	85.489	ENSSSCG00000034476	-	74	85.489

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011465	-	100	92.611	ENSG00000174840	PDE12	100	92.611	Homo_sapiens
ENSSSCG00000011465	-	95	57.313	ENSAPOG00000018806	pde12	95	57.216	Acanthochromis_polyacanthus
ENSSSCG00000011465	-	100	93.432	ENSAMEG00000011802	PDE12	100	93.043	Ailuropoda_melanoleuca
ENSSSCG00000011465	-	94	60.309	ENSACIG00000014918	pde12	94	59.036	Amphilophus_citrinellus
ENSSSCG00000011465	-	95	58.348	ENSAOCG00000016376	pde12	95	57.659	Amphiprion_ocellaris
ENSSSCG00000011465	-	94	58.204	ENSAPEG00000000756	pde12	94	57.513	Amphiprion_percula
ENSSSCG00000011465	-	94	58.478	ENSATEG00000003072	pde12	97	57.958	Anabas_testudineus
ENSSSCG00000011465	-	100	62.783	ENSACAG00000003067	PDE12	100	62.399	Anolis_carolinensis
ENSSSCG00000011465	-	100	90.640	ENSANAG00000011815	PDE12	100	91.626	Aotus_nancymaae
ENSSSCG00000011465	-	94	58.997	ENSACLG00000010127	pde12	96	57.612	Astatotilapia_calliptera
ENSSSCG00000011465	-	94	58.974	ENSAMXG00000020765	pde12	95	58.433	Astyanax_mexicanus
ENSSSCG00000011465	-	100	94.417	ENSBTAG00000015563	PDE12	100	94.417	Bos_taurus
ENSSSCG00000011465	-	52	30.149	WBGene00011268	pde-12	52	30.149	Caenorhabditis_elegans
ENSSSCG00000011465	-	100	91.133	ENSCJAG00000019905	PDE12	100	91.133	Callithrix_jacchus
ENSSSCG00000011465	-	100	92.045	ENSCAFG00000007792	PDE12	100	92.857	Canis_familiaris
ENSSSCG00000011465	-	100	92.208	ENSCAFG00020006692	PDE12	100	93.019	Canis_lupus_dingo
ENSSSCG00000011465	-	100	94.108	ENSCHIG00000014202	PDE12	100	93.944	Capra_hircus
ENSSSCG00000011465	-	100	92.447	ENSTSYG00000025750	PDE12	100	92.447	Carlito_syrichta
ENSSSCG00000011465	-	100	88.834	ENSCPOG00000001620	PDE12	100	88.506	Cavia_porcellus
ENSSSCG00000011465	-	100	79.146	ENSCCAG00000031290	PDE12	100	79.146	Cebus_capucinus
ENSSSCG00000011465	-	100	92.282	ENSCATG00000044539	PDE12	100	92.282	Cercocebus_atys
ENSSSCG00000011465	-	100	87.028	ENSCLAG00000004864	PDE12	100	87.028	Chinchilla_lanigera
ENSSSCG00000011465	-	100	91.133	ENSCSAG00000012275	PDE12	100	92.118	Chlorocebus_sabaeus
ENSSSCG00000011465	-	89	95.068	ENSCHOG00000002188	-	89	95.068	Choloepus_hoffmanni
ENSSSCG00000011465	-	68	93.462	ENSCHOG00000012173	-	100	93.220	Choloepus_hoffmanni
ENSSSCG00000011465	-	96	73.220	ENSCPBG00000012353	PDE12	91	71.550	Chrysemys_picta_bellii
ENSSSCG00000011465	-	93	35.456	ENSCING00000006903	-	99	39.050	Ciona_intestinalis
ENSSSCG00000011465	-	100	92.282	ENSCANG00000038723	PDE12	100	92.282	Colobus_angolensis_palliatus
ENSSSCG00000011465	-	100	89.819	ENSCGRG00001021836	Pde12	100	89.819	Cricetulus_griseus_chok1gshd
ENSSSCG00000011465	-	100	88.506	ENSCGRG00000012319	Pde12	100	89.163	Cricetulus_griseus_crigri
ENSSSCG00000011465	-	94	57.539	ENSCSEG00000018538	pde12	99	57.366	Cynoglossus_semilaevis
ENSSSCG00000011465	-	95	48.193	ENSCVAG00000003624	pde12	94	47.578	Cyprinodon_variegatus
ENSSSCG00000011465	-	94	57.292	ENSDARG00000030964	pde12	93	56.944	Danio_rerio
ENSSSCG00000011465	-	100	88.979	ENSDNOG00000048413	PDE12	100	88.655	Dasypus_novemcinctus
ENSSSCG00000011465	-	100	90.805	ENSDORG00000004313	Pde12	100	90.805	Dipodomys_ordii
ENSSSCG00000011465	-	94	33.557	FBgn0051759	CG31759	99	33.221	Drosophila_melanogaster
ENSSSCG00000011465	-	64	49.315	ENSEBUG00000004803	pde12	71	49.315	Eptatretus_burgeri
ENSSSCG00000011465	-	100	94.745	ENSEASG00005000644	PDE12	100	94.745	Equus_asinus_asinus
ENSSSCG00000011465	-	100	94.910	ENSECAG00000005326	PDE12	100	94.910	Equus_caballus
ENSSSCG00000011465	-	64	93.642	ENSEEUG00000010406	-	62	93.642	Erinaceus_europaeus
ENSSSCG00000011465	-	94	60.659	ENSELUG00000014391	pde12	92	60.485	Esox_lucius
ENSSSCG00000011465	-	100	93.596	ENSFCAG00000031696	PDE12	100	92.939	Felis_catus
ENSSSCG00000011465	-	79	74.120	ENSFALG00000008401	PDE12	99	74.120	Ficedula_albicollis
ENSSSCG00000011465	-	100	90.312	ENSFDAG00000021278	PDE12	100	90.312	Fukomys_damarensis
ENSSSCG00000011465	-	94	54.974	ENSFHEG00000018967	pde12	86	56.538	Fundulus_heteroclitus
ENSSSCG00000011465	-	94	54.939	ENSGMOG00000018041	pde12	98	54.844	Gadus_morhua
ENSSSCG00000011465	-	100	67.374	ENSGALG00000052355	PDE12	99	66.722	Gallus_gallus
ENSSSCG00000011465	-	95	56.724	ENSGAFG00000002045	pde12	94	56.477	Gambusia_affinis
ENSSSCG00000011465	-	99	56.557	ENSGACG00000003914	pde12	99	56.322	Gasterosteus_aculeatus
ENSSSCG00000011465	-	95	73.630	ENSGAGG00000010266	PDE12	92	72.978	Gopherus_agassizii
ENSSSCG00000011465	-	100	92.611	ENSGGOG00000003312	PDE12	100	92.611	Gorilla_gorilla
ENSSSCG00000011465	-	94	59.310	ENSHBUG00000023370	pde12	94	58.621	Haplochromis_burtoni
ENSSSCG00000011465	-	100	90.312	ENSHGLG00000005661	PDE12	100	90.312	Heterocephalus_glaber_female
ENSSSCG00000011465	-	100	90.312	ENSHGLG00100001136	PDE12	100	90.312	Heterocephalus_glaber_male
ENSSSCG00000011465	-	95	57.070	ENSHCOG00000013749	pde12	94	57.167	Hippocampus_comes
ENSSSCG00000011465	-	94	60.485	ENSIPUG00000007123	Pde12	94	60.485	Ictalurus_punctatus
ENSSSCG00000011465	-	100	92.447	ENSSTOG00000007861	PDE12	100	92.447	Ictidomys_tridecemlineatus
ENSSSCG00000011465	-	100	87.034	ENSJJAG00000006038	Pde12	100	87.358	Jaculus_jaculus
ENSSSCG00000011465	-	100	57.468	ENSKMAG00000018523	pde12	99	57.026	Kryptolebias_marmoratus
ENSSSCG00000011465	-	94	59.036	ENSLBEG00000009762	PDE12	94	58.864	Labrus_bergylta
ENSSSCG00000011465	-	94	56.799	ENSLBEG00000026775	pde12	94	56.552	Labrus_bergylta
ENSSSCG00000011465	-	94	67.764	ENSLACG00000015492	PDE12	94	66.898	Latimeria_chalumnae
ENSSSCG00000011465	-	95	64.076	ENSLOCG00000013277	pde12	93	63.212	Lepisosteus_oculatus
ENSSSCG00000011465	-	92	92.362	ENSLAFG00000002821	PDE12	100	92.718	Loxodonta_africana
ENSSSCG00000011465	-	100	92.447	ENSMFAG00000030966	PDE12	100	92.447	Macaca_fascicularis
ENSSSCG00000011465	-	100	92.447	ENSMMUG00000004052	PDE12	100	92.447	Macaca_mulatta
ENSSSCG00000011465	-	100	92.447	ENSMNEG00000030068	PDE12	100	92.447	Macaca_nemestrina
ENSSSCG00000011465	-	100	92.447	ENSMLEG00000036137	PDE12	100	92.447	Mandrillus_leucophaeus
ENSSSCG00000011465	-	95	60.653	ENSMAMG00000014415	pde12	95	59.310	Mastacembelus_armatus
ENSSSCG00000011465	-	94	56.131	ENSMZEG00005028202	-	98	55.786	Maylandia_zebra
ENSSSCG00000011465	-	94	59.413	ENSMZEG00005016132	pde12	96	58.549	Maylandia_zebra
ENSSSCG00000011465	-	52	79.937	ENSMGAG00000006449	PDE12	99	79.937	Meleagris_gallopavo
ENSSSCG00000011465	-	100	80.424	ENSMAUG00000000442	Pde12	100	80.261	Mesocricetus_auratus
ENSSSCG00000011465	-	100	91.297	ENSMICG00000005723	PDE12	100	91.297	Microcebus_murinus
ENSSSCG00000011465	-	100	87.521	ENSMOCG00000020734	Pde12	100	88.013	Microtus_ochrogaster
ENSSSCG00000011465	-	95	59.483	ENSMMOG00000013636	pde12	94	57.461	Mola_mola
ENSSSCG00000011465	-	100	74.959	ENSMODG00000000155	PDE12	100	72.375	Monodelphis_domestica
ENSSSCG00000011465	-	95	56.971	ENSMALG00000022647	pde12	94	56.282	Monopterus_albus
ENSSSCG00000011465	-	100	88.670	MGP_CAROLIEiJ_G0019032	Pde12	100	88.670	Mus_caroli
ENSSSCG00000011465	-	100	88.177	ENSMUSG00000043702	Pde12	100	88.177	Mus_musculus
ENSSSCG00000011465	-	100	88.670	MGP_PahariEiJ_G0030049	Pde12	100	88.670	Mus_pahari
ENSSSCG00000011465	-	100	88.342	MGP_SPRETEiJ_G0019916	Pde12	100	88.342	Mus_spretus
ENSSSCG00000011465	-	100	93.924	ENSMPUG00000016869	PDE12	100	93.924	Mustela_putorius_furo
ENSSSCG00000011465	-	100	92.775	ENSMLUG00000026487	PDE12	100	92.775	Myotis_lucifugus
ENSSSCG00000011465	-	100	87.356	ENSNGAG00000001228	Pde12	100	87.028	Nannospalax_galili
ENSSSCG00000011465	-	94	54.498	ENSNBRG00000015769	pde12	64	54.152	Neolamprologus_brichardi
ENSSSCG00000011465	-	100	92.775	ENSNLEG00000007269	-	100	92.775	Nomascus_leucogenys
ENSSSCG00000011465	-	100	84.992	ENSNLEG00000034833	-	100	84.339	Nomascus_leucogenys
ENSSSCG00000011465	-	100	73.650	ENSMEUG00000006786	PDE12	100	74.141	Notamacropus_eugenii
ENSSSCG00000011465	-	100	88.925	ENSOPRG00000015273	PDE12	100	89.088	Ochotona_princeps
ENSSSCG00000011465	-	100	90.805	ENSODEG00000006268	PDE12	100	90.805	Octodon_degus
ENSSSCG00000011465	-	94	59.413	ENSONIG00000004293	pde12	100	58.549	Oreochromis_niloticus
ENSSSCG00000011465	-	90	78.221	ENSOANG00000012885	PDE12	98	79.374	Ornithorhynchus_anatinus
ENSSSCG00000011465	-	100	93.279	ENSOCUG00000000823	PDE12	100	93.443	Oryctolagus_cuniculus
ENSSSCG00000011465	-	94	57.539	ENSORLG00000017444	pde12	94	56.747	Oryzias_latipes
ENSSSCG00000011465	-	94	57.366	ENSORLG00020010469	pde12	94	56.574	Oryzias_latipes_hni
ENSSSCG00000011465	-	94	57.366	ENSORLG00015004093	pde12	94	56.846	Oryzias_latipes_hsok
ENSSSCG00000011465	-	96	55.892	ENSOMEG00000020900	pde12	94	57.192	Oryzias_melastigma
ENSSSCG00000011465	-	100	91.626	ENSOGAG00000024093	PDE12	100	91.626	Otolemur_garnettii
ENSSSCG00000011465	-	90	94.756	ENSOARG00000013642	PDE12	100	94.575	Ovis_aries
ENSSSCG00000011465	-	100	92.447	ENSPPAG00000034712	PDE12	100	92.447	Pan_paniscus
ENSSSCG00000011465	-	100	93.596	ENSPPRG00000011738	PDE12	100	92.939	Panthera_pardus
ENSSSCG00000011465	-	83	91.585	ENSPTIG00000019166	PDE12	96	91.849	Panthera_tigris_altaica
ENSSSCG00000011465	-	100	92.611	ENSPTRG00000030221	PDE12	100	92.611	Pan_troglodytes
ENSSSCG00000011465	-	100	92.282	ENSPANG00000007324	PDE12	100	92.282	Papio_anubis
ENSSSCG00000011465	-	99	59.868	ENSPKIG00000025354	pde12	94	61.179	Paramormyrops_kingsleyae
ENSSSCG00000011465	-	95	75.000	ENSPSIG00000004926	PDE12	92	74.355	Pelodiscus_sinensis
ENSSSCG00000011465	-	95	55.422	ENSPMGG00000006742	pde12	97	55.250	Periophthalmus_magnuspinnatus
ENSSSCG00000011465	-	86	90.215	ENSPEMG00000007259	Pde12	96	90.215	Peromyscus_maniculatus_bairdii
ENSSSCG00000011465	-	95	58.591	ENSPFOG00000011864	pde12	94	58.276	Poecilia_formosa
ENSSSCG00000011465	-	72	61.991	ENSPLAG00000023871	pde12	81	61.538	Poecilia_latipinna
ENSSSCG00000011465	-	95	58.103	ENSPMEG00000005674	pde12	94	58.076	Poecilia_mexicana
ENSSSCG00000011465	-	95	58.319	ENSPREG00000022831	pde12	94	58.591	Poecilia_reticulata
ENSSSCG00000011465	-	100	91.133	ENSPPYG00000013769	PDE12	100	92.118	Pongo_abelii
ENSSSCG00000011465	-	100	91.297	ENSPCOG00000026004	PDE12	100	91.297	Propithecus_coquereli
ENSSSCG00000011465	-	100	93.268	ENSPVAG00000008885	PDE12	100	92.611	Pteropus_vampyrus
ENSSSCG00000011465	-	94	59.483	ENSPNYG00000013258	pde12	94	58.793	Pundamilia_nyererei
ENSSSCG00000011465	-	94	62.392	ENSPNAG00000029032	pde12	95	62.045	Pygocentrus_nattereri
ENSSSCG00000011465	-	100	88.998	ENSRNOG00000059442	Pde12	100	88.998	Rattus_norvegicus
ENSSSCG00000011465	-	100	92.118	ENSRBIG00000040704	PDE12	100	92.118	Rhinopithecus_bieti
ENSSSCG00000011465	-	100	92.118	ENSRROG00000031279	PDE12	100	92.118	Rhinopithecus_roxellana
ENSSSCG00000011465	-	100	90.312	ENSSBOG00000023974	PDE12	100	91.133	Saimiri_boliviensis_boliviensis
ENSSSCG00000011465	-	79	64.478	ENSSFOG00015003468	pde12	88	64.478	Scleropages_formosus
ENSSSCG00000011465	-	95	56.724	ENSSMAG00000003258	pde12	95	56.971	Scophthalmus_maximus
ENSSSCG00000011465	-	95	59.413	ENSSDUG00000020470	pde12	94	59.067	Seriola_dumerili
ENSSSCG00000011465	-	95	59.413	ENSSLDG00000019833	pde12	94	59.067	Seriola_lalandi_dorsalis
ENSSSCG00000011465	-	100	89.508	ENSSARG00000007201	PDE12	100	88.013	Sorex_araneus
ENSSSCG00000011465	-	95	59.483	ENSSPAG00000014980	pde12	95	58.348	Stegastes_partitus
ENSSSCG00000011465	-	60	80.000	ENSTGUG00000007290	PDE12	100	80.000	Taeniopygia_guttata
ENSSSCG00000011465	-	96	57.360	ENSTRUG00000005159	pde12	94	57.686	Takifugu_rubripes
ENSSSCG00000011465	-	96	57.699	ENSTNIG00000017497	pde12	96	57.360	Tetraodon_nigroviridis
ENSSSCG00000011465	-	80	94.737	ENSTBEG00000008202	PDE12	80	94.737	Tupaia_belangeri
ENSSSCG00000011465	-	100	95.074	ENSTTRG00000014707	PDE12	100	95.074	Tursiops_truncatus
ENSSSCG00000011465	-	76	80.994	ENSUAMG00000008368	-	98	80.346	Ursus_americanus
ENSSSCG00000011465	-	100	94.910	ENSUAMG00000020634	-	100	94.910	Ursus_americanus
ENSSSCG00000011465	-	72	95.183	ENSUMAG00000021906	PDE12	100	95.183	Ursus_maritimus
ENSSSCG00000011465	-	100	91.680	ENSVVUG00000020335	PDE12	100	91.840	Vulpes_vulpes
ENSSSCG00000011465	-	95	54.404	ENSXETG00000008653	pde12	97	53.979	Xenopus_tropicalis
ENSSSCG00000011465	-	95	57.759	ENSXCOG00000000407	pde12	97	57.414	Xiphophorus_couchianus
ENSSSCG00000011465	-	99	56.137	ENSXMAG00000013370	pde12	99	55.921	Xiphophorus_maculatus