EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000011518 (Gene tree)
Gene ID: 100511045
Gene Symbol: SHQ1
Alias: FLJ10539|Shq1p
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 107021 bases
Position: chr13:54073726-54180746
Accession: 100511045
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000012276	SHQ1	PF04925.15	4.6e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000012605	SHQ1-201	2023	XM_003132324	ENSSSCP00000012276	579 (aa)	XP_003132372	F1SFN0

Gene Model

Click here to download ENSSSCG00000011518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011518	SHQ1	99	80.796	ENSG00000144736	SHQ1	96	97.917	Homo_sapiens
ENSSSCG00000011518	SHQ1	77	60.714	ENSAPOG00000000397	shq1	91	53.310	Acanthochromis_polyacanthus
ENSSSCG00000011518	SHQ1	100	79.275	ENSAMEG00000015140	SHQ1	100	79.275	Ailuropoda_melanoleuca
ENSSSCG00000011518	SHQ1	75	61.149	ENSACIG00000021249	shq1	92	52.860	Amphilophus_citrinellus
ENSSSCG00000011518	SHQ1	77	62.054	ENSAOCG00000023311	shq1	92	54.231	Amphiprion_ocellaris
ENSSSCG00000011518	SHQ1	77	61.384	ENSAPEG00000021686	shq1	92	53.671	Amphiprion_percula
ENSSSCG00000011518	SHQ1	75	62.100	ENSATEG00000008475	shq1	67	60.577	Anabas_testudineus
ENSSSCG00000011518	SHQ1	88	63.992	ENSAPLG00000013926	SHQ1	100	65.753	Anas_platyrhynchos
ENSSSCG00000011518	SHQ1	100	60.929	ENSACAG00000014809	SHQ1	85	61.618	Anolis_carolinensis
ENSSSCG00000011518	SHQ1	99	80.243	ENSANAG00000029241	SHQ1	99	79.203	Aotus_nancymaae
ENSSSCG00000011518	SHQ1	97	61.922	ENSANAG00000030500	-	98	61.032	Aotus_nancymaae
ENSSSCG00000011518	SHQ1	75	60.641	ENSACLG00000023077	shq1	82	53.626	Astatotilapia_calliptera
ENSSSCG00000011518	SHQ1	74	56.250	ENSAMXG00000043822	shq1	71	57.108	Astyanax_mexicanus
ENSSSCG00000011518	SHQ1	100	82.729	ENSBTAG00000005436	SHQ1	100	82.729	Bos_taurus
ENSSSCG00000011518	SHQ1	75	34.831	WBGene00021655	Y48A5A.1	92	34.515	Caenorhabditis_elegans
ENSSSCG00000011518	SHQ1	99	78.547	ENSCJAG00000015131	SHQ1	99	79.239	Callithrix_jacchus
ENSSSCG00000011518	SHQ1	100	78.756	ENSCAFG00000006434	SHQ1	99	78.756	Canis_familiaris
ENSSSCG00000011518	SHQ1	100	78.584	ENSCAFG00020016743	SHQ1	99	78.584	Canis_lupus_dingo
ENSSSCG00000011518	SHQ1	100	83.592	ENSCHIG00000012271	SHQ1	91	83.592	Capra_hircus
ENSSSCG00000011518	SHQ1	99	74.956	ENSTSYG00000014439	SHQ1	99	74.956	Carlito_syrichta
ENSSSCG00000011518	SHQ1	91	66.476	ENSCAPG00000009343	SHQ1	97	92.208	Cavia_aperea
ENSSSCG00000011518	SHQ1	99	74.873	ENSCPOG00000011443	SHQ1	99	74.490	Cavia_porcellus
ENSSSCG00000011518	SHQ1	99	71.528	ENSCCAG00000027080	SHQ1	99	69.792	Cebus_capucinus
ENSSSCG00000011518	SHQ1	97	63.943	ENSCCAG00000036087	-	97	62.167	Cebus_capucinus
ENSSSCG00000011518	SHQ1	100	78.485	ENSCATG00000041238	SHQ1	100	78.830	Cercocebus_atys
ENSSSCG00000011518	SHQ1	99	75.773	ENSCLAG00000004206	SHQ1	99	75.559	Chinchilla_lanigera
ENSSSCG00000011518	SHQ1	85	74.593	ENSCSAG00000011514	SHQ1	100	75.000	Chlorocebus_sabaeus
ENSSSCG00000011518	SHQ1	50	93.333	ENSCHOG00000003273	-	100	71.014	Choloepus_hoffmanni
ENSSSCG00000011518	SHQ1	99	65.345	ENSCPBG00000006441	SHQ1	94	65.345	Chrysemys_picta_bellii
ENSSSCG00000011518	SHQ1	73	41.920	ENSCING00000008013	-	85	41.604	Ciona_intestinalis
ENSSSCG00000011518	SHQ1	68	40.852	ENSCSAVG00000002332	-	88	40.148	Ciona_savignyi
ENSSSCG00000011518	SHQ1	99	79.861	ENSCANG00000039295	SHQ1	100	78.472	Colobus_angolensis_palliatus
ENSSSCG00000011518	SHQ1	90	80.738	ENSCGRG00001012583	Shq1	98	80.738	Cricetulus_griseus_chok1gshd
ENSSSCG00000011518	SHQ1	90	80.738	ENSCGRG00000009849	Shq1	98	80.738	Cricetulus_griseus_crigri
ENSSSCG00000011518	SHQ1	72	62.291	ENSCSEG00000007829	shq1	92	54.174	Cynoglossus_semilaevis
ENSSSCG00000011518	SHQ1	79	59.957	ENSCVAG00000020049	shq1	94	50.769	Cyprinodon_variegatus
ENSSSCG00000011518	SHQ1	98	49.912	ENSDARG00000058522	shq1	88	50.263	Danio_rerio
ENSSSCG00000011518	SHQ1	99	80.139	ENSDNOG00000033937	SHQ1	99	80.139	Dasypus_novemcinctus
ENSSSCG00000011518	SHQ1	99	65.458	ENSETEG00000005766	SHQ1	99	66.321	Echinops_telfairi
ENSSSCG00000011518	SHQ1	65	48.806	ENSEBUG00000005445	shq1	72	49.693	Eptatretus_burgeri
ENSSSCG00000011518	SHQ1	100	80.484	ENSEASG00005002237	SHQ1	100	80.484	Equus_asinus_asinus
ENSSSCG00000011518	SHQ1	98	80.668	ENSECAG00000015673	SHQ1	96	80.668	Equus_caballus
ENSSSCG00000011518	SHQ1	99	79.514	ENSEEUG00000010568	SHQ1	99	79.514	Erinaceus_europaeus
ENSSSCG00000011518	SHQ1	72	60.432	ENSELUG00000003476	shq1	90	52.473	Esox_lucius
ENSSSCG00000011518	SHQ1	100	78.584	ENSFCAG00000012781	SHQ1	100	78.584	Felis_catus
ENSSSCG00000011518	SHQ1	97	63.894	ENSFALG00000013428	SHQ1	92	63.894	Ficedula_albicollis
ENSSSCG00000011518	SHQ1	99	72.529	ENSFDAG00000005595	SHQ1	91	71.022	Fukomys_damarensis
ENSSSCG00000011518	SHQ1	75	61.416	ENSFHEG00000017552	shq1	95	51.795	Fundulus_heteroclitus
ENSSSCG00000011518	SHQ1	68	58.438	ENSGMOG00000007350	shq1	100	58.438	Gadus_morhua
ENSSSCG00000011518	SHQ1	99	61.847	ENSGALG00000007798	SHQ1	93	61.672	Gallus_gallus
ENSSSCG00000011518	SHQ1	68	60.453	ENSGACG00000011797	shq1	100	60.804	Gasterosteus_aculeatus
ENSSSCG00000011518	SHQ1	99	80.104	ENSGGOG00000034818	SHQ1	99	78.720	Gorilla_gorilla
ENSSSCG00000011518	SHQ1	76	60.407	ENSHBUG00000010857	shq1	80	57.347	Haplochromis_burtoni
ENSSSCG00000011518	SHQ1	99	73.244	ENSHGLG00000003637	SHQ1	92	72.742	Heterocephalus_glaber_female
ENSSSCG00000011518	SHQ1	99	73.490	ENSHGLG00100011957	SHQ1	92	74.118	Heterocephalus_glaber_male
ENSSSCG00000011518	SHQ1	99	50.777	ENSHCOG00000010799	shq1	95	50.940	Hippocampus_comes
ENSSSCG00000011518	SHQ1	75	59.361	ENSIPUG00000001247	shq1	91	52.102	Ictalurus_punctatus
ENSSSCG00000011518	SHQ1	98	70.877	ENSSTOG00000010043	SHQ1	100	71.454	Ictidomys_tridecemlineatus
ENSSSCG00000011518	SHQ1	99	72.870	ENSJJAG00000017611	Shq1	99	81.148	Jaculus_jaculus
ENSSSCG00000011518	SHQ1	96	53.309	ENSKMAG00000004457	shq1	91	51.478	Kryptolebias_marmoratus
ENSSSCG00000011518	SHQ1	99	57.143	ENSLACG00000014243	SHQ1	87	59.253	Latimeria_chalumnae
ENSSSCG00000011518	SHQ1	97	55.908	ENSLOCG00000009970	shq1	97	55.732	Lepisosteus_oculatus
ENSSSCG00000011518	SHQ1	100	78.313	ENSMFAG00000039148	SHQ1	100	78.657	Macaca_fascicularis
ENSSSCG00000011518	SHQ1	99	58.549	ENSMFAG00000037396	-	99	58.621	Macaca_fascicularis
ENSSSCG00000011518	SHQ1	99	58.377	ENSMMUG00000021761	-	99	58.448	Macaca_mulatta
ENSSSCG00000011518	SHQ1	92	76.360	ENSMMUG00000009571	SHQ1	96	76.735	Macaca_mulatta
ENSSSCG00000011518	SHQ1	100	78.313	ENSMNEG00000032667	SHQ1	100	78.657	Macaca_nemestrina
ENSSSCG00000011518	SHQ1	100	78.485	ENSMLEG00000038493	SHQ1	100	78.830	Mandrillus_leucophaeus
ENSSSCG00000011518	SHQ1	78	60.394	ENSMAMG00000023432	shq1	87	54.145	Mastacembelus_armatus
ENSSSCG00000011518	SHQ1	76	60.407	ENSMZEG00005008649	shq1	80	57.347	Maylandia_zebra
ENSSSCG00000011518	SHQ1	99	61.431	ENSMGAG00000009640	SHQ1	94	60.967	Meleagris_gallopavo
ENSSSCG00000011518	SHQ1	99	71.853	ENSMAUG00000022030	Shq1	98	81.148	Mesocricetus_auratus
ENSSSCG00000011518	SHQ1	99	77.740	ENSMICG00000009224	SHQ1	99	75.856	Microcebus_murinus
ENSSSCG00000011518	SHQ1	99	71.777	ENSMOCG00000017836	Shq1	99	81.148	Microtus_ochrogaster
ENSSSCG00000011518	SHQ1	75	60.000	ENSMMOG00000010569	shq1	69	58.696	Mola_mola
ENSSSCG00000011518	SHQ1	95	63.949	ENSMODG00000003926	SHQ1	98	63.148	Monodelphis_domestica
ENSSSCG00000011518	SHQ1	75	63.014	ENSMALG00000008870	shq1	68	62.830	Monopterus_albus
ENSSSCG00000011518	SHQ1	99	72.396	MGP_CAROLIEiJ_G0028689	Shq1	98	81.148	Mus_caroli
ENSSSCG00000011518	SHQ1	99	72.396	ENSMUSG00000035378	Shq1	98	80.738	Mus_musculus
ENSSSCG00000011518	SHQ1	99	73.438	MGP_PahariEiJ_G0022440	Shq1	99	81.557	Mus_pahari
ENSSSCG00000011518	SHQ1	99	72.474	MGP_SPRETEiJ_G0029717	Shq1	99	79.918	Mus_spretus
ENSSSCG00000011518	SHQ1	100	79.275	ENSMPUG00000017006	SHQ1	98	79.275	Mustela_putorius_furo
ENSSSCG00000011518	SHQ1	89	74.517	ENSMLUG00000013539	SHQ1	97	74.517	Myotis_lucifugus
ENSSSCG00000011518	SHQ1	98	66.842	ENSNGAG00000023317	Shq1	99	66.491	Nannospalax_galili
ENSSSCG00000011518	SHQ1	60	58.357	ENSNBRG00000024004	shq1	77	54.863	Neolamprologus_brichardi
ENSSSCG00000011518	SHQ1	99	81.315	ENSNLEG00000002731	SHQ1	99	79.931	Nomascus_leucogenys
ENSSSCG00000011518	SHQ1	75	64.815	ENSMEUG00000009350	-	89	64.815	Notamacropus_eugenii
ENSSSCG00000011518	SHQ1	98	73.030	ENSODEG00000009192	SHQ1	97	85.232	Octodon_degus
ENSSSCG00000011518	SHQ1	76	60.407	ENSONIG00000020264	shq1	92	52.743	Oreochromis_niloticus
ENSSSCG00000011518	SHQ1	99	75.945	ENSOCUG00000016695	SHQ1	99	75.945	Oryctolagus_cuniculus
ENSSSCG00000011518	SHQ1	74	60.046	ENSORLG00000023538	shq1	83	55.010	Oryzias_latipes
ENSSSCG00000011518	SHQ1	74	61.201	ENSORLG00020003697	shq1	82	56.033	Oryzias_latipes_hni
ENSSSCG00000011518	SHQ1	74	60.508	ENSORLG00015021040	shq1	81	56.159	Oryzias_latipes_hsok
ENSSSCG00000011518	SHQ1	74	61.343	ENSOMEG00000001225	shq1	99	51.897	Oryzias_melastigma
ENSSSCG00000011518	SHQ1	98	79.478	ENSOGAG00000003898	SHQ1	100	79.478	Otolemur_garnettii
ENSSSCG00000011518	SHQ1	100	82.534	ENSOARG00000009547	SHQ1	100	82.534	Ovis_aries
ENSSSCG00000011518	SHQ1	99	80.969	ENSPPAG00000027714	SHQ1	99	79.585	Pan_paniscus
ENSSSCG00000011518	SHQ1	99	61.407	ENSPPAG00000043263	-	99	60.206	Pan_paniscus
ENSSSCG00000011518	SHQ1	100	78.929	ENSPPRG00000004769	SHQ1	100	78.929	Panthera_pardus
ENSSSCG00000011518	SHQ1	100	75.648	ENSPTIG00000011478	SHQ1	100	75.648	Panthera_tigris_altaica
ENSSSCG00000011518	SHQ1	99	60.549	ENSPTRG00000048303	-	99	59.348	Pan_troglodytes
ENSSSCG00000011518	SHQ1	99	80.796	ENSPTRG00000015106	SHQ1	99	79.412	Pan_troglodytes
ENSSSCG00000011518	SHQ1	100	77.797	ENSPANG00000002881	SHQ1	100	79.174	Papio_anubis
ENSSSCG00000011518	SHQ1	74	57.809	ENSPKIG00000021517	shq1	93	49.040	Paramormyrops_kingsleyae
ENSSSCG00000011518	SHQ1	99	65.172	ENSPSIG00000005536	SHQ1	95	65.172	Pelodiscus_sinensis
ENSSSCG00000011518	SHQ1	76	59.184	ENSPMGG00000008838	shq1	73	59.453	Periophthalmus_magnuspinnatus
ENSSSCG00000011518	SHQ1	99	74.132	ENSPEMG00000000251	Shq1	98	81.967	Peromyscus_maniculatus_bairdii
ENSSSCG00000011518	SHQ1	76	56.858	ENSPMAG00000005372	shq1	99	57.080	Petromyzon_marinus
ENSSSCG00000011518	SHQ1	75	60.364	ENSPFOG00000003118	shq1	97	50.173	Poecilia_formosa
ENSSSCG00000011518	SHQ1	60	57.759	ENSPMEG00000011076	shq1	98	45.859	Poecilia_mexicana
ENSSSCG00000011518	SHQ1	66	57.772	ENSPREG00000000591	shq1	92	47.438	Poecilia_reticulata
ENSSSCG00000011518	SHQ1	99	80.450	ENSPPYG00000013717	SHQ1	99	79.239	Pongo_abelii
ENSSSCG00000011518	SHQ1	96	79.211	ENSPCAG00000009035	SHQ1	99	78.383	Procavia_capensis
ENSSSCG00000011518	SHQ1	99	76.897	ENSPCOG00000008415	SHQ1	99	79.483	Propithecus_coquereli
ENSSSCG00000011518	SHQ1	99	82.404	ENSPVAG00000017392	SHQ1	99	82.404	Pteropus_vampyrus
ENSSSCG00000011518	SHQ1	76	60.407	ENSPNYG00000003878	shq1	81	56.566	Pundamilia_nyererei
ENSSSCG00000011518	SHQ1	74	60.138	ENSPNAG00000026840	shq1	88	52.931	Pygocentrus_nattereri
ENSSSCG00000011518	SHQ1	98	69.064	ENSRNOG00000005433	Shq1	98	69.732	Rattus_norvegicus
ENSSSCG00000011518	SHQ1	99	76.256	ENSRBIG00000026280	SHQ1	99	76.000	Rhinopithecus_bieti
ENSSSCG00000011518	SHQ1	99	79.861	ENSRROG00000034126	SHQ1	100	78.646	Rhinopithecus_roxellana
ENSSSCG00000011518	SHQ1	99	71.626	ENSSBOG00000021038	SHQ1	99	71.799	Saimiri_boliviensis_boliviensis
ENSSSCG00000011518	SHQ1	95	65.099	ENSSHAG00000015077	SHQ1	96	65.823	Sarcophilus_harrisii
ENSSSCG00000011518	SHQ1	75	64.138	ENSSFOG00015016241	shq1	91	54.078	Scleropages_formosus
ENSSSCG00000011518	SHQ1	76	62.500	ENSSMAG00000016151	shq1	71	62.500	Scophthalmus_maximus
ENSSSCG00000011518	SHQ1	74	63.741	ENSSDUG00000011986	shq1	92	54.704	Seriola_dumerili
ENSSSCG00000011518	SHQ1	72	62.319	ENSSLDG00000013908	shq1	92	54.720	Seriola_lalandi_dorsalis
ENSSSCG00000011518	SHQ1	100	64.138	ENSSARG00000007119	SHQ1	100	62.931	Sorex_araneus
ENSSSCG00000011518	SHQ1	83	61.983	ENSSPUG00000011526	-	90	61.856	Sphenodon_punctatus
ENSSSCG00000011518	SHQ1	99	61.986	ENSTGUG00000009933	SHQ1	99	60.959	Taeniopygia_guttata
ENSSSCG00000011518	SHQ1	72	57.416	ENSTRUG00000009446	shq1	94	49.737	Takifugu_rubripes
ENSSSCG00000011518	SHQ1	72	56.971	ENSTNIG00000007354	shq1	99	56.512	Tetraodon_nigroviridis
ENSSSCG00000011518	SHQ1	69	95.745	ENSTBEG00000011295	SHQ1	79	95.745	Tupaia_belangeri
ENSSSCG00000011518	SHQ1	99	84.201	ENSTTRG00000005320	SHQ1	99	84.201	Tursiops_truncatus
ENSSSCG00000011518	SHQ1	98	78.873	ENSUMAG00000024031	SHQ1	98	78.873	Ursus_maritimus
ENSSSCG00000011518	SHQ1	92	76.692	ENSVPAG00000004880	SHQ1	100	77.068	Vicugna_pacos
ENSSSCG00000011518	SHQ1	100	79.102	ENSVVUG00000013906	SHQ1	99	79.102	Vulpes_vulpes
ENSSSCG00000011518	SHQ1	75	65.367	ENSXETG00000032215	shq1	93	55.286	Xenopus_tropicalis