EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000011619 (Gene tree)
Gene ID: 100157361
Gene Symbol: EEFSEC
Alias: EFSEC|SELB|eEFSec
Full Name: eukaryotic elongation factor%2C selenocysteine-tRNA specific
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 200416 bases
Position: chr13:71995930-72196345
Accession: 100157361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000041661	GTP_EFTU	PF00009.27	1.5e-26	1	1
ENSSSCP00000024670	GTP_EFTU	PF00009.27	3.1e-26	1	1
ENSSSCP00000043782	GTP_EFTU	PF00009.27	3.7e-26	1	1
ENSSSCP00000012382	GTP_EFTU	PF00009.27	3.7e-26	1	1
ENSSSCP00000041661	MMR_HSR1	PF01926.23	1.8e-05	1	1
ENSSSCP00000024670	MMR_HSR1	PF01926.23	4e-05	1	1
ENSSSCP00000043782	MMR_HSR1	PF01926.23	4.6e-05	1	1
ENSSSCP00000012382	MMR_HSR1	PF01926.23	4.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000042384	EEFSEC-204	1466	-	ENSSSCP00000041661	370 (aa)	-	A0A287ACC5
ENSSSCT00000012716	EEFSEC-202	1770	XM_021069441	ENSSSCP00000012382	589 (aa)	XP_020925100	F1SPF7
ENSSSCT00000031616	EEFSEC-201	1913	-	ENSSSCP00000024670	542 (aa)	-	I3LKQ5
ENSSSCT00000042022	EEFSEC-203	2555	XM_021069440	ENSSSCP00000043782	592 (aa)	XP_020925099	A0A287AIF7

Gene Model

Click here to download ENSSSCG00000011619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000011619	EEFSEC	55	30.032	ENSSSCG00000007803	TUFM	65	30.032

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011619	EEFSEC	100	89.655	ENSG00000132394	EEFSEC	100	88.815	Homo_sapiens
ENSSSCG00000011619	EEFSEC	99	70.751	ENSAPOG00000015931	eefsec	98	64.116	Acanthochromis_polyacanthus
ENSSSCG00000011619	EEFSEC	80	89.655	ENSAMEG00000015165	EEFSEC	99	82.600	Ailuropoda_melanoleuca
ENSSSCG00000011619	EEFSEC	99	68.033	ENSACIG00000022407	eefsec	99	71.146	Amphilophus_citrinellus
ENSSSCG00000011619	EEFSEC	99	69.960	ENSAOCG00000008603	eefsec	98	64.116	Amphiprion_ocellaris
ENSSSCG00000011619	EEFSEC	99	66.423	ENSAPEG00000017090	eefsec	98	63.667	Amphiprion_percula
ENSSSCG00000011619	EEFSEC	99	66.423	ENSATEG00000002753	eefsec	99	62.458	Anabas_testudineus
ENSSSCG00000011619	EEFSEC	80	78.241	ENSAPLG00000006745	EEFSEC	100	78.161	Anas_platyrhynchos
ENSSSCG00000011619	EEFSEC	100	88.793	ENSANAG00000032691	EEFSEC	100	87.646	Aotus_nancymaae
ENSSSCG00000011619	EEFSEC	99	70.356	ENSACLG00000024565	eefsec	98	70.356	Astatotilapia_calliptera
ENSSSCG00000011619	EEFSEC	98	69.721	ENSAMXG00000002260	eefsec	97	63.193	Astyanax_mexicanus
ENSSSCG00000011619	EEFSEC	100	91.860	ENSBTAG00000030962	EEFSEC	100	91.860	Bos_taurus
ENSSSCG00000011619	EEFSEC	96	31.461	WBGene00008133	efsc-1	91	31.169	Caenorhabditis_elegans
ENSSSCG00000011619	EEFSEC	100	90.517	ENSCJAG00000005387	EEFSEC	100	87.813	Callithrix_jacchus
ENSSSCG00000011619	EEFSEC	99	90.517	ENSCAFG00000004135	EEFSEC	81	88.557	Canis_familiaris
ENSSSCG00000011619	EEFSEC	100	90.517	ENSCAFG00020004811	EEFSEC	100	88.557	Canis_lupus_dingo
ENSSSCG00000011619	EEFSEC	100	90.517	ENSCHIG00000021838	EEFSEC	100	88.945	Capra_hircus
ENSSSCG00000011619	EEFSEC	100	93.103	ENSTSYG00000012922	EEFSEC	100	88.815	Carlito_syrichta
ENSSSCG00000011619	EEFSEC	83	81.339	ENSCAPG00000000084	EEFSEC	98	81.339	Cavia_aperea
ENSSSCG00000011619	EEFSEC	100	90.517	ENSCPOG00000024352	EEFSEC	100	88.645	Cavia_porcellus
ENSSSCG00000011619	EEFSEC	100	89.655	ENSCCAG00000031336	EEFSEC	100	87.980	Cebus_capucinus
ENSSSCG00000011619	EEFSEC	100	89.655	ENSCATG00000019414	EEFSEC	100	89.117	Cercocebus_atys
ENSSSCG00000011619	EEFSEC	100	92.241	ENSCLAG00000006973	EEFSEC	100	89.744	Chinchilla_lanigera
ENSSSCG00000011619	EEFSEC	100	90.517	ENSCSAG00000008599	EEFSEC	100	88.481	Chlorocebus_sabaeus
ENSSSCG00000011619	EEFSEC	99	80.784	ENSCPBG00000014356	EEFSEC	86	77.652	Chrysemys_picta_bellii
ENSSSCG00000011619	EEFSEC	98	62.454	ENSCSAVG00000002208	-	100	55.814	Ciona_savignyi
ENSSSCG00000011619	EEFSEC	100	89.655	ENSCANG00000031492	EEFSEC	99	87.980	Colobus_angolensis_palliatus
ENSSSCG00000011619	EEFSEC	100	86.723	ENSCGRG00001018089	Eefsec	100	86.723	Cricetulus_griseus_chok1gshd
ENSSSCG00000011619	EEFSEC	100	86.207	ENSCGRG00000010063	Eefsec	100	89.051	Cricetulus_griseus_crigri
ENSSSCG00000011619	EEFSEC	99	66.938	ENSCSEG00000003008	eefsec	99	70.751	Cynoglossus_semilaevis
ENSSSCG00000011619	EEFSEC	99	65.818	ENSCVAG00000005381	eefsec	99	63.378	Cyprinodon_variegatus
ENSSSCG00000011619	EEFSEC	99	72.332	ENSDARG00000004696	eefsec	99	63.484	Danio_rerio
ENSSSCG00000011619	EEFSEC	100	82.689	ENSDNOG00000008925	EEFSEC	100	84.060	Dasypus_novemcinctus
ENSSSCG00000011619	EEFSEC	83	72.211	ENSDORG00000000264	Eefsec	99	86.598	Dipodomys_ordii
ENSSSCG00000011619	EEFSEC	96	45.785	FBgn0034627	eEFSec	97	45.221	Drosophila_melanogaster
ENSSSCG00000011619	EEFSEC	99	76.639	ENSETEG00000007406	EEFSEC	99	76.639	Echinops_telfairi
ENSSSCG00000011619	EEFSEC	79	63.000	ENSEBUG00000015029	eefsec	98	49.554	Eptatretus_burgeri
ENSSSCG00000011619	EEFSEC	100	91.379	ENSEASG00005006786	EEFSEC	100	90.301	Equus_asinus_asinus
ENSSSCG00000011619	EEFSEC	100	93.103	ENSECAG00000016565	EEFSEC	100	90.635	Equus_caballus
ENSSSCG00000011619	EEFSEC	99	63.139	ENSELUG00000016632	eefsec	98	60.368	Esox_lucius
ENSSSCG00000011619	EEFSEC	100	93.966	ENSFCAG00000006153	EEFSEC	100	89.684	Felis_catus
ENSSSCG00000011619	EEFSEC	73	85.350	ENSFALG00000007901	EEFSEC	99	73.171	Ficedula_albicollis
ENSSSCG00000011619	EEFSEC	83	88.438	ENSFDAG00000010243	EEFSEC	100	92.473	Fukomys_damarensis
ENSSSCG00000011619	EEFSEC	99	66.423	ENSFHEG00000007155	eefsec	98	63.423	Fundulus_heteroclitus
ENSSSCG00000011619	EEFSEC	99	64.427	ENSGMOG00000007705	eefsec	98	60.508	Gadus_morhua
ENSSSCG00000011619	EEFSEC	99	80.632	ENSGALG00000038684	EEFSEC	99	74.320	Gallus_gallus
ENSSSCG00000011619	EEFSEC	99	66.182	ENSGAFG00000021692	eefsec	99	63.317	Gambusia_affinis
ENSSSCG00000011619	EEFSEC	99	65.693	ENSGACG00000000793	eefsec	99	63.317	Gasterosteus_aculeatus
ENSSSCG00000011619	EEFSEC	99	80.784	ENSGAGG00000002059	EEFSEC	98	73.898	Gopherus_agassizii
ENSSSCG00000011619	EEFSEC	88	89.080	ENSGGOG00000001445	EEFSEC	99	89.080	Gorilla_gorilla
ENSSSCG00000011619	EEFSEC	99	70.356	ENSHBUG00000008917	eefsec	97	65.370	Haplochromis_burtoni
ENSSSCG00000011619	EEFSEC	100	92.241	ENSHGLG00000000094	EEFSEC	100	92.241	Heterocephalus_glaber_female
ENSSSCG00000011619	EEFSEC	100	89.655	ENSHGLG00100011393	EEFSEC	96	87.162	Heterocephalus_glaber_male
ENSSSCG00000011619	EEFSEC	98	66.912	ENSHCOG00000004193	eefsec	99	63.837	Hippocampus_comes
ENSSSCG00000011619	EEFSEC	99	68.165	ENSIPUG00000017291	eefsec	98	65.918	Ictalurus_punctatus
ENSSSCG00000011619	EEFSEC	83	84.178	ENSSTOG00000019802	EEFSEC	99	92.105	Ictidomys_tridecemlineatus
ENSSSCG00000011619	EEFSEC	74	89.416	ENSJJAG00000020703	-	100	90.789	Jaculus_jaculus
ENSSSCG00000011619	EEFSEC	99	66.058	ENSKMAG00000019907	eefsec	98	63.697	Kryptolebias_marmoratus
ENSSSCG00000011619	EEFSEC	98	67.647	ENSLBEG00000017908	eefsec	98	63.697	Labrus_bergylta
ENSSSCG00000011619	EEFSEC	78	79.661	ENSLACG00000013137	EEFSEC	99	67.608	Latimeria_chalumnae
ENSSSCG00000011619	EEFSEC	98	75.697	ENSLOCG00000014535	eefsec	98	65.932	Lepisosteus_oculatus
ENSSSCG00000011619	EEFSEC	98	85.876	ENSLAFG00000001997	EEFSEC	100	84.486	Loxodonta_africana
ENSSSCG00000011619	EEFSEC	100	90.517	ENSMFAG00000042128	EEFSEC	100	88.815	Macaca_fascicularis
ENSSSCG00000011619	EEFSEC	82	89.322	ENSMMUG00000018663	EEFSEC	100	89.322	Macaca_mulatta
ENSSSCG00000011619	EEFSEC	100	89.655	ENSMNEG00000028574	EEFSEC	100	88.648	Macaca_nemestrina
ENSSSCG00000011619	EEFSEC	84	88.956	ENSMLEG00000041771	EEFSEC	93	88.956	Mandrillus_leucophaeus
ENSSSCG00000011619	EEFSEC	98	67.582	ENSMAMG00000023964	eefsec	99	71.315	Mastacembelus_armatus
ENSSSCG00000011619	EEFSEC	99	66.485	ENSMZEG00005009380	eefsec	98	70.356	Maylandia_zebra
ENSSSCG00000011619	EEFSEC	72	74.937	ENSMGAG00000007243	EEFSEC	100	74.937	Meleagris_gallopavo
ENSSSCG00000011619	EEFSEC	98	87.030	ENSMAUG00000011197	Eefsec	100	89.781	Mesocricetus_auratus
ENSSSCG00000011619	EEFSEC	100	87.205	ENSMOCG00000017748	Eefsec	100	90.110	Microtus_ochrogaster
ENSSSCG00000011619	EEFSEC	99	68.108	ENSMMOG00000021820	eefsec	99	71.318	Mola_mola
ENSSSCG00000011619	EEFSEC	98	81.750	ENSMODG00000008034	EEFSEC	91	81.633	Monodelphis_domestica
ENSSSCG00000011619	EEFSEC	98	65.314	ENSMALG00000016211	eefsec	99	65.370	Monopterus_albus
ENSSSCG00000011619	EEFSEC	100	87.331	MGP_CAROLIEiJ_G0028627	Eefsec	100	92.126	Mus_caroli
ENSSSCG00000011619	EEFSEC	100	87.521	ENSMUSG00000033216	Eefsec	100	92.913	Mus_musculus
ENSSSCG00000011619	EEFSEC	100	87.162	MGP_PahariEiJ_G0022366	Eefsec	100	92.126	Mus_pahari
ENSSSCG00000011619	EEFSEC	100	87.352	MGP_SPRETEiJ_G0029640	Eefsec	100	92.520	Mus_spretus
ENSSSCG00000011619	EEFSEC	99	88.275	ENSMPUG00000017340	EEFSEC	96	88.275	Mustela_putorius_furo
ENSSSCG00000011619	EEFSEC	84	87.123	ENSMLUG00000004261	EEFSEC	100	87.123	Myotis_lucifugus
ENSSSCG00000011619	EEFSEC	74	89.051	ENSNGAG00000023278	-	100	90.909	Nannospalax_galili
ENSSSCG00000011619	EEFSEC	99	70.751	ENSNBRG00000002387	eefsec	98	70.751	Neolamprologus_brichardi
ENSSSCG00000011619	EEFSEC	100	88.793	ENSNLEG00000014303	EEFSEC	100	88.481	Nomascus_leucogenys
ENSSSCG00000011619	EEFSEC	73	88.608	ENSMEUG00000005747	EEFSEC	100	77.485	Notamacropus_eugenii
ENSSSCG00000011619	EEFSEC	99	88.696	ENSOPRG00000011276	EEFSEC	100	88.047	Ochotona_princeps
ENSSSCG00000011619	EEFSEC	100	89.655	ENSODEG00000002928	EEFSEC	100	87.912	Octodon_degus
ENSSSCG00000011619	EEFSEC	82	60.241	ENSONIG00000019038	eefsec	100	60.757	Oreochromis_niloticus
ENSSSCG00000011619	EEFSEC	78	78.774	ENSOANG00000009108	EEFSEC	99	74.691	Ornithorhynchus_anatinus
ENSSSCG00000011619	EEFSEC	100	89.655	ENSOCUG00000016517	EEFSEC	100	88.107	Oryctolagus_cuniculus
ENSSSCG00000011619	EEFSEC	99	66.940	ENSORLG00000001377	eefsec	98	69.565	Oryzias_latipes
ENSSSCG00000011619	EEFSEC	99	66.667	ENSORLG00020000729	eefsec	98	69.565	Oryzias_latipes_hni
ENSSSCG00000011619	EEFSEC	99	65.693	ENSORLG00015001986	eefsec	98	63.300	Oryzias_latipes_hsok
ENSSSCG00000011619	EEFSEC	84	60.359	ENSOMEG00000010071	eefsec	89	60.359	Oryzias_melastigma
ENSSSCG00000011619	EEFSEC	81	89.498	ENSOGAG00000014084	EEFSEC	97	89.703	Otolemur_garnettii
ENSSSCG00000011619	EEFSEC	70	88.918	ENSOARG00000004600	EEFSEC	100	89.182	Ovis_aries
ENSSSCG00000011619	EEFSEC	100	89.655	ENSPPAG00000030936	EEFSEC	100	88.648	Pan_paniscus
ENSSSCG00000011619	EEFSEC	100	93.966	ENSPPRG00000002846	EEFSEC	100	90.150	Panthera_pardus
ENSSSCG00000011619	EEFSEC	85	88.650	ENSPTIG00000013855	EEFSEC	92	88.650	Panthera_tigris_altaica
ENSSSCG00000011619	EEFSEC	100	88.793	ENSPTRG00000015353	EEFSEC	100	88.481	Pan_troglodytes
ENSSSCG00000011619	EEFSEC	100	90.517	ENSPANG00000017041	EEFSEC	100	88.648	Papio_anubis
ENSSSCG00000011619	EEFSEC	99	67.500	ENSPKIG00000005220	eefsec	98	71.429	Paramormyrops_kingsleyae
ENSSSCG00000011619	EEFSEC	97	77.376	ENSPSIG00000015135	EEFSEC	97	77.376	Pelodiscus_sinensis
ENSSSCG00000011619	EEFSEC	99	66.058	ENSPMGG00000020300	eefsec	99	63.468	Periophthalmus_magnuspinnatus
ENSSSCG00000011619	EEFSEC	100	86.387	ENSPEMG00000013677	Eefsec	100	89.781	Peromyscus_maniculatus_bairdii
ENSSSCG00000011619	EEFSEC	98	65.913	ENSPMAG00000006779	eefsec	99	65.677	Petromyzon_marinus
ENSSSCG00000011619	EEFSEC	72	88.158	ENSPCIG00000020494	EEFSEC	100	77.459	Phascolarctos_cinereus
ENSSSCG00000011619	EEFSEC	99	65.455	ENSPFOG00000003748	eefsec	99	62.795	Poecilia_formosa
ENSSSCG00000011619	EEFSEC	99	65.455	ENSPLAG00000018012	eefsec	99	62.795	Poecilia_latipinna
ENSSSCG00000011619	EEFSEC	99	65.455	ENSPMEG00000001202	eefsec	99	62.795	Poecilia_mexicana
ENSSSCG00000011619	EEFSEC	99	65.818	ENSPREG00000012235	eefsec	99	63.069	Poecilia_reticulata
ENSSSCG00000011619	EEFSEC	100	88.793	ENSPPYG00000013436	EEFSEC	100	87.980	Pongo_abelii
ENSSSCG00000011619	EEFSEC	98	77.903	ENSPCAG00000005883	EEFSEC	100	77.903	Procavia_capensis
ENSSSCG00000011619	EEFSEC	100	88.168	ENSPCOG00000023432	EEFSEC	100	83.973	Propithecus_coquereli
ENSSSCG00000011619	EEFSEC	100	89.655	ENSPVAG00000007070	EEFSEC	65	90.551	Pteropus_vampyrus
ENSSSCG00000011619	EEFSEC	99	70.356	ENSPNYG00000005726	eefsec	98	70.356	Pundamilia_nyererei
ENSSSCG00000011619	EEFSEC	99	71.146	ENSPNAG00000016724	eefsec	99	63.712	Pygocentrus_nattereri
ENSSSCG00000011619	EEFSEC	100	88.919	ENSRNOG00000012954	Eefsec	100	89.883	Rattus_norvegicus
ENSSSCG00000011619	EEFSEC	100	90.517	ENSRBIG00000032635	EEFSEC	100	88.481	Rhinopithecus_bieti
ENSSSCG00000011619	EEFSEC	69	90.661	ENSRROG00000030260	-	89	86.447	Rhinopithecus_roxellana
ENSSSCG00000011619	EEFSEC	82	88.912	ENSSBOG00000031478	EEFSEC	100	88.912	Saimiri_boliviensis_boliviensis
ENSSSCG00000011619	EEFSEC	72	88.816	ENSSHAG00000014760	EEFSEC	100	78.279	Sarcophilus_harrisii
ENSSSCG00000011619	EEFSEC	99	67.029	ENSSFOG00015021109	eefsec	98	62.378	Scleropages_formosus
ENSSSCG00000011619	EEFSEC	99	70.751	ENSSMAG00000001454	eefsec	99	62.625	Scophthalmus_maximus
ENSSSCG00000011619	EEFSEC	99	66.788	ENSSDUG00000007924	eefsec	99	71.429	Seriola_dumerili
ENSSSCG00000011619	EEFSEC	96	66.423	ENSSLDG00000024985	eefsec	98	61.800	Seriola_lalandi_dorsalis
ENSSSCG00000011619	EEFSEC	57	88.235	ENSSARG00000003789	-	57	88.235	Sorex_araneus
ENSSSCG00000011619	EEFSEC	71	84.768	ENSSPUG00000004191	EEFSEC	100	72.222	Sphenodon_punctatus
ENSSSCG00000011619	EEFSEC	99	67.486	ENSSPAG00000001320	eefsec	99	69.960	Stegastes_partitus
ENSSSCG00000011619	EEFSEC	99	81.641	ENSTGUG00000007895	EEFSEC	100	73.773	Taeniopygia_guttata
ENSSSCG00000011619	EEFSEC	99	67.518	ENSTRUG00000010327	eefsec	98	63.317	Takifugu_rubripes
ENSSSCG00000011619	EEFSEC	99	67.883	ENSTNIG00000003225	eefsec	99	63.272	Tetraodon_nigroviridis
ENSSSCG00000011619	EEFSEC	100	93.822	ENSTTRG00000000994	EEFSEC	100	91.414	Tursiops_truncatus
ENSSSCG00000011619	EEFSEC	100	92.241	ENSUAMG00000017283	EEFSEC	100	89.983	Ursus_americanus
ENSSSCG00000011619	EEFSEC	80	90.278	ENSVVUG00000018372	EEFSEC	91	89.885	Vulpes_vulpes
ENSSSCG00000011619	EEFSEC	88	72.803	ENSXETG00000002066	eefsec	99	72.803	Xenopus_tropicalis
ENSSSCG00000011619	EEFSEC	99	66.182	ENSXCOG00000019916	eefsec	99	63.317	Xiphophorus_couchianus
ENSSSCG00000011619	EEFSEC	99	65.818	ENSXMAG00000001839	eefsec	99	63.317	Xiphophorus_maculatus