EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000011856 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 156 bases
Position: chr13:18059772-18059927
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000049734	Ribosomal_L35Ae	PF01247.18	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000052218	-	156	-	ENSSSCP00000049734	51 (aa)	-	A0A287B003

Gene Model

Click here to download ENSSSCG00000011856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000011856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000011856	-	78	82.500	ENSSSCG00000038103	-	98	82.500
ENSSSCG00000011856	-	100	80.392	ENSSSCG00000034018	-	82	80.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000011856	-	100	90.196	ENSG00000182899	RPL35A	93	90.196	Homo_sapiens
ENSSSCG00000011856	-	100	82.353	ENSANAG00000022199	-	80	82.353	Aotus_nancymaae
ENSSSCG00000011856	-	100	90.196	ENSANAG00000034640	-	84	90.196	Aotus_nancymaae
ENSSSCG00000011856	-	100	90.196	ENSBTAG00000050046	-	86	90.196	Bos_taurus
ENSSSCG00000011856	-	100	78.431	ENSCJAG00000040770	-	58	78.431	Callithrix_jacchus
ENSSSCG00000011856	-	100	76.471	ENSCJAG00000032082	-	65	76.471	Callithrix_jacchus
ENSSSCG00000011856	-	100	90.196	ENSCAFG00020018646	-	67	90.196	Canis_lupus_dingo
ENSSSCG00000011856	-	100	90.196	ENSCHIG00000011371	-	54	90.196	Capra_hircus
ENSSSCG00000011856	-	100	76.471	ENSTSYG00000026633	-	62	76.471	Carlito_syrichta
ENSSSCG00000011856	-	100	88.235	ENSTSYG00000027309	-	93	88.235	Carlito_syrichta
ENSSSCG00000011856	-	100	88.235	ENSCCAG00000031400	-	65	88.235	Cebus_capucinus
ENSSSCG00000011856	-	100	90.196	ENSCCAG00000033520	-	81	90.196	Cebus_capucinus
ENSSSCG00000011856	-	100	90.196	ENSCCAG00000036074	-	55	90.196	Cebus_capucinus
ENSSSCG00000011856	-	100	88.235	ENSCCAG00000027951	-	50	88.235	Cebus_capucinus
ENSSSCG00000011856	-	90	86.957	ENSCATG00000030636	-	55	86.957	Cercocebus_atys
ENSSSCG00000011856	-	100	90.196	ENSCATG00000043646	-	67	90.196	Cercocebus_atys
ENSSSCG00000011856	-	100	80.392	ENSCATG00000029078	-	61	80.392	Cercocebus_atys
ENSSSCG00000011856	-	100	84.314	ENSCPBG00000025012	-	53	84.314	Chrysemys_picta_bellii
ENSSSCG00000011856	-	100	88.235	ENSCPBG00000026324	-	96	88.235	Chrysemys_picta_bellii
ENSSSCG00000011856	-	100	82.353	ENSCGRG00001021309	-	86	82.353	Cricetulus_griseus_chok1gshd
ENSSSCG00000011856	-	100	88.235	ENSCGRG00001008890	-	71	88.235	Cricetulus_griseus_chok1gshd
ENSSSCG00000011856	-	100	80.392	ENSCGRG00001019824	-	78	80.392	Cricetulus_griseus_chok1gshd
ENSSSCG00000011856	-	100	82.353	ENSCGRG00000016248	-	86	82.353	Cricetulus_griseus_crigri
ENSSSCG00000011856	-	100	80.392	ENSCGRG00000010088	-	78	80.392	Cricetulus_griseus_crigri
ENSSSCG00000011856	-	100	88.235	ENSCGRG00000012887	-	71	88.235	Cricetulus_griseus_crigri
ENSSSCG00000011856	-	100	60.784	ENSCGRG00000011675	-	50	60.784	Cricetulus_griseus_crigri
ENSSSCG00000011856	-	100	84.314	ENSDNOG00000001259	-	58	84.314	Dasypus_novemcinctus
ENSSSCG00000011856	-	100	52.941	ENSDNOG00000037135	-	52	52.941	Dasypus_novemcinctus
ENSSSCG00000011856	-	100	82.353	ENSDORG00000027638	-	56	82.353	Dipodomys_ordii
ENSSSCG00000011856	-	100	80.392	ENSDORG00000027259	-	85	80.392	Dipodomys_ordii
ENSSSCG00000011856	-	100	80.392	ENSEASG00005020114	-	56	80.392	Equus_asinus_asinus
ENSSSCG00000011856	-	100	80.392	ENSECAG00000038094	-	56	80.392	Equus_caballus
ENSSSCG00000011856	-	98	80.392	ENSFCAG00000036020	-	60	80.392	Felis_catus
ENSSSCG00000011856	-	100	78.431	ENSFCAG00000034370	-	79	78.431	Felis_catus
ENSSSCG00000011856	-	100	90.196	ENSFCAG00000028061	-	70	90.196	Felis_catus
ENSSSCG00000011856	-	100	72.549	ENSGGOG00000000054	-	53	72.549	Gorilla_gorilla
ENSSSCG00000011856	-	100	60.784	ENSGGOG00000042136	-	71	60.784	Gorilla_gorilla
ENSSSCG00000011856	-	100	80.392	ENSJJAG00000018286	-	75	80.392	Jaculus_jaculus
ENSSSCG00000011856	-	90	80.435	ENSJJAG00000000353	-	50	80.435	Jaculus_jaculus
ENSSSCG00000011856	-	100	90.196	ENSMMUG00000000050	-	77	90.196	Macaca_mulatta
ENSSSCG00000011856	-	100	84.314	ENSMNEG00000042302	-	70	84.314	Macaca_nemestrina
ENSSSCG00000011856	-	90	86.957	ENSMNEG00000027895	-	55	86.957	Macaca_nemestrina
ENSSSCG00000011856	-	100	90.196	ENSMNEG00000035229	-	75	90.196	Macaca_nemestrina
ENSSSCG00000011856	-	94	91.667	ENSMNEG00000043845	-	53	91.667	Macaca_nemestrina
ENSSSCG00000011856	-	100	76.471	ENSMICG00000035629	-	72	76.471	Microcebus_murinus
ENSSSCG00000011856	-	100	88.235	ENSMICG00000033782	-	54	88.235	Microcebus_murinus
ENSSSCG00000011856	-	100	86.275	ENSMICG00000005314	-	50	86.275	Microcebus_murinus
ENSSSCG00000011856	-	98	82.000	ENSMOCG00000018165	-	82	82.000	Microtus_ochrogaster
ENSSSCG00000011856	-	100	82.353	ENSMOCG00000011949	-	81	82.353	Microtus_ochrogaster
ENSSSCG00000011856	-	100	82.353	ENSMOCG00000020632	-	68	82.353	Microtus_ochrogaster
ENSSSCG00000011856	-	100	82.353	ENSMOCG00000014007	-	50	82.353	Microtus_ochrogaster
ENSSSCG00000011856	-	98	82.000	ENSMOCG00000018368	-	61	82.000	Microtus_ochrogaster
ENSSSCG00000011856	-	100	66.667	ENSMLUG00000027274	-	58	66.667	Myotis_lucifugus
ENSSSCG00000011856	-	100	84.314	ENSNLEG00000034725	-	61	84.314	Nomascus_leucogenys
ENSSSCG00000011856	-	100	88.235	ENSNLEG00000028637	-	61	88.235	Nomascus_leucogenys
ENSSSCG00000011856	-	100	82.353	ENSNLEG00000029287	-	63	82.353	Nomascus_leucogenys
ENSSSCG00000011856	-	100	90.196	ENSMEUG00000003375	RPL35A	50	90.196	Notamacropus_eugenii
ENSSSCG00000011856	-	98	80.000	ENSODEG00000012187	-	83	80.000	Octodon_degus
ENSSSCG00000011856	-	100	88.235	ENSODEG00000013089	-	58	88.235	Octodon_degus
ENSSSCG00000011856	-	100	78.431	ENSODEG00000018050	-	74	78.431	Octodon_degus
ENSSSCG00000011856	-	100	72.549	ENSORLG00000019747	rpl35a	84	72.549	Oryzias_latipes
ENSSSCG00000011856	-	100	74.510	ENSPPAG00000034231	-	74	74.510	Pan_paniscus
ENSSSCG00000011856	-	100	76.471	ENSPPAG00000041532	-	54	76.471	Pan_paniscus
ENSSSCG00000011856	-	100	90.196	ENSPPRG00000023537	-	55	90.196	Panthera_pardus
ENSSSCG00000011856	-	94	83.673	ENSPPRG00000003746	-	58	83.673	Panthera_pardus
ENSSSCG00000011856	-	100	82.353	ENSPPRG00000013069	-	88	82.353	Panthera_pardus
ENSSSCG00000011856	-	100	78.431	ENSPPRG00000001788	-	78	78.431	Panthera_pardus
ENSSSCG00000011856	-	100	84.615	ENSPTIG00000010740	-	55	84.615	Panthera_tigris_altaica
ENSSSCG00000011856	-	100	74.510	ENSPTRG00000041475	-	53	74.510	Pan_troglodytes
ENSSSCG00000011856	-	100	88.235	ENSPEMG00000000829	-	74	88.235	Peromyscus_maniculatus_bairdii
ENSSSCG00000011856	-	100	80.392	ENSPEMG00000024044	-	76	80.392	Peromyscus_maniculatus_bairdii
ENSSSCG00000011856	-	100	80.392	ENSPCIG00000027118	-	82	80.392	Phascolarctos_cinereus
ENSSSCG00000011856	-	92	82.979	ENSPCOG00000018424	-	67	82.979	Propithecus_coquereli
ENSSSCG00000011856	-	100	84.314	ENSPCOG00000018157	-	56	84.314	Propithecus_coquereli
ENSSSCG00000011856	-	100	80.392	ENSRBIG00000042037	-	76	80.392	Rhinopithecus_bieti
ENSSSCG00000011856	-	100	86.275	ENSRBIG00000044977	-	67	89.362	Rhinopithecus_bieti
ENSSSCG00000011856	-	100	84.314	ENSRROG00000043006	-	68	84.314	Rhinopithecus_roxellana
ENSSSCG00000011856	-	100	90.196	ENSRROG00000036506	-	64	90.196	Rhinopithecus_roxellana
ENSSSCG00000011856	-	100	88.235	ENSRROG00000035486	-	62	88.235	Rhinopithecus_roxellana
ENSSSCG00000011856	-	100	78.431	ENSSBOG00000036237	-	61	78.431	Saimiri_boliviensis_boliviensis
ENSSSCG00000011856	-	98	90.000	ENSSBOG00000029158	-	69	90.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000011856	-	100	88.235	ENSSBOG00000023659	-	76	88.235	Saimiri_boliviensis_boliviensis
ENSSSCG00000011856	-	100	88.235	ENSSBOG00000027297	-	58	88.235	Saimiri_boliviensis_boliviensis
ENSSSCG00000011856	-	92	78.723	ENSSLDG00000008371	-	84	78.723	Seriola_lalandi_dorsalis
ENSSSCG00000011856	-	82	78.571	ENSSLDG00000010135	-	74	78.571	Seriola_lalandi_dorsalis
ENSSSCG00000011856	-	100	80.392	ENSSPUG00000012977	-	72	80.392	Sphenodon_punctatus
ENSSSCG00000011856	-	100	84.314	ENSUAMG00000018306	-	70	84.314	Ursus_americanus
ENSSSCG00000011856	-	100	90.196	ENSUAMG00000021870	-	54	90.196	Ursus_americanus
ENSSSCG00000011856	-	98	76.000	ENSUAMG00000026510	-	56	76.000	Ursus_americanus
ENSSSCG00000011856	-	100	90.196	ENSUMAG00000003441	-	54	90.196	Ursus_maritimus
ENSSSCG00000011856	-	100	84.314	ENSUMAG00000010111	-	70	84.314	Ursus_maritimus
ENSSSCG00000011856	-	100	84.314	ENSVVUG00000030363	-	58	84.314	Vulpes_vulpes
ENSSSCG00000011856	-	100	86.275	ENSVVUG00000021023	-	85	86.275	Vulpes_vulpes
ENSSSCG00000011856	-	98	86.000	ENSVVUG00000026840	-	62	86.000	Vulpes_vulpes