EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000012035 (Gene tree)
Gene ID: 100525664
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 100343 bases
Position: chr13:196230095-196330437
Accession: 100525664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000037988	Exo_endo_phos	PF03372.23	8.2e-15	1	1
ENSSSCP00000012817	Exo_endo_phos	PF03372.23	8.4e-15	1	1
ENSSSCP00000051758	Exo_endo_phos	PF03372.23	8.4e-15	1	1
ENSSSCP00000036587	Exo_endo_phos	PF03372.23	8.6e-15	1	1
ENSSSCP00000059529	Exo_endo_phos	PF03372.23	1.1e-14	1	1
ENSSSCP00000037988	DUF1866	PF08952.11	9.9e-58	1	1
ENSSSCP00000051758	DUF1866	PF08952.11	1e-57	1	1
ENSSSCP00000012817	DUF1866	PF08952.11	1e-57	1	1
ENSSSCP00000036587	DUF1866	PF08952.11	1e-57	1	1
ENSSSCP00000059529	DUF1866	PF08952.11	1.2e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000060074	SYNJ1-203	7158	XM_021070926	ENSSSCP00000051758	1302 (aa)	XP_020926585	A0A287B624
ENSSSCT00000064998	SYNJ1-205	3895	XM_013982561	ENSSSCP00000037988	1289 (aa)	XP_013838015	A0A287A230
ENSSSCT00000037896	SYNJ1-202	7064	XM_013982563	ENSSSCP00000059529	1529 (aa)	XP_013838017	A0A287BSN1
ENSSSCT00000051945	SYNJ1-201	7226	XM_013982558	ENSSSCP00000036587	1319 (aa)	XP_013838012	A0A286ZYK1
ENSSSCT00000013167	SYNJ1-204	7086	XM_013982560	ENSSSCP00000012817	1303 (aa)	XP_013838014	F1SHM3

Gene Model

Click here to download ENSSSCG00000012035's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00562	Inositol phosphate metabolism	KEGG
ssc01100	Metabolic pathways	KEGG
ssc04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000012035	SYNJ1	96	48.452	ENSSSCG00000012315	SYNJ2	83	53.358

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012035	SYNJ1	100	94.091	ENSG00000159082	SYNJ1	100	98.849	Homo_sapiens
ENSSSCG00000012035	SYNJ1	84	76.095	ENSAPOG00000002809	synj1	94	70.198	Acanthochromis_polyacanthus
ENSSSCG00000012035	SYNJ1	99	95.278	ENSAMEG00000015028	SYNJ1	98	84.774	Ailuropoda_melanoleuca
ENSSSCG00000012035	SYNJ1	99	65.773	ENSACIG00000008857	synj1	98	66.490	Amphilophus_citrinellus
ENSSSCG00000012035	SYNJ1	99	67.871	ENSAOCG00000009835	synj1	98	69.386	Amphiprion_ocellaris
ENSSSCG00000012035	SYNJ1	84	75.159	ENSAPEG00000021010	synj1	87	64.797	Amphiprion_percula
ENSSSCG00000012035	SYNJ1	99	66.692	ENSATEG00000002306	synj1	87	64.966	Anabas_testudineus
ENSSSCG00000012035	SYNJ1	100	84.488	ENSAPLG00000011832	SYNJ1	100	74.361	Anas_platyrhynchos
ENSSSCG00000012035	SYNJ1	100	82.829	ENSACAG00000003006	-	99	83.219	Anolis_carolinensis
ENSSSCG00000012035	SYNJ1	100	93.712	ENSANAG00000027325	SYNJ1	100	93.558	Aotus_nancymaae
ENSSSCG00000012035	SYNJ1	100	69.213	ENSACLG00000002255	synj1	100	68.699	Astatotilapia_calliptera
ENSSSCG00000012035	SYNJ1	82	77.580	ENSAMXG00000008208	synj1	95	62.744	Astyanax_mexicanus
ENSSSCG00000012035	SYNJ1	100	94.122	ENSBTAG00000003063	SYNJ1	99	94.068	Bos_taurus
ENSSSCG00000012035	SYNJ1	100	93.635	ENSCJAG00000009187	SYNJ1	100	93.482	Callithrix_jacchus
ENSSSCG00000012035	SYNJ1	99	94.593	ENSCAFG00000009041	SYNJ1	99	94.326	Canis_familiaris
ENSSSCG00000012035	SYNJ1	100	93.477	ENSCAFG00020025776	SYNJ1	100	90.560	Canis_lupus_dingo
ENSSSCG00000012035	SYNJ1	100	93.818	ENSCHIG00000005095	SYNJ1	100	91.580	Capra_hircus
ENSSSCG00000012035	SYNJ1	100	93.246	ENSTSYG00000014541	SYNJ1	100	93.093	Carlito_syrichta
ENSSSCG00000012035	SYNJ1	96	76.179	ENSCAPG00000014483	SYNJ1	99	76.778	Cavia_aperea
ENSSSCG00000012035	SYNJ1	100	92.343	ENSCPOG00000012182	SYNJ1	100	92.343	Cavia_porcellus
ENSSSCG00000012035	SYNJ1	100	93.482	ENSCCAG00000020825	SYNJ1	100	93.328	Cebus_capucinus
ENSSSCG00000012035	SYNJ1	100	94.014	ENSCATG00000033891	SYNJ1	100	93.860	Cercocebus_atys
ENSSSCG00000012035	SYNJ1	100	93.328	ENSCLAG00000009796	SYNJ1	100	98.557	Chinchilla_lanigera
ENSSSCG00000012035	SYNJ1	100	94.011	ENSCSAG00000009654	SYNJ1	100	93.859	Chlorocebus_sabaeus
ENSSSCG00000012035	SYNJ1	84	91.205	ENSCHOG00000012390	SYNJ1	81	91.205	Choloepus_hoffmanni
ENSSSCG00000012035	SYNJ1	94	86.908	ENSCPBG00000006402	SYNJ1	97	86.747	Chrysemys_picta_bellii
ENSSSCG00000012035	SYNJ1	100	94.091	ENSCANG00000031359	SYNJ1	100	93.937	Colobus_angolensis_palliatus
ENSSSCG00000012035	SYNJ1	100	91.964	ENSCGRG00001010861	Synj1	100	91.812	Cricetulus_griseus_chok1gshd
ENSSSCG00000012035	SYNJ1	100	91.964	ENSCGRG00000015749	Synj1	100	96.970	Cricetulus_griseus_crigri
ENSSSCG00000012035	SYNJ1	84	75.475	ENSCSEG00000019614	synj1	99	69.495	Cynoglossus_semilaevis
ENSSSCG00000012035	SYNJ1	85	73.327	ENSCVAG00000019250	synj1	98	67.456	Cyprinodon_variegatus
ENSSSCG00000012035	SYNJ1	85	76.812	ENSDARG00000025011	synj1	100	68.635	Danio_rerio
ENSSSCG00000012035	SYNJ1	98	90.285	ENSDNOG00000010732	SYNJ1	99	77.861	Dasypus_novemcinctus
ENSSSCG00000012035	SYNJ1	54	96.719	ENSDORG00000014735	-	100	98.268	Dipodomys_ordii
ENSSSCG00000012035	SYNJ1	86	94.928	ENSETEG00000018674	SYNJ1	79	94.872	Echinops_telfairi
ENSSSCG00000012035	SYNJ1	100	94.182	ENSEASG00005006287	SYNJ1	98	95.807	Equus_asinus_asinus
ENSSSCG00000012035	SYNJ1	100	94.636	ENSECAG00000004829	SYNJ1	99	95.024	Equus_caballus
ENSSSCG00000012035	SYNJ1	91	89.118	ENSEEUG00000005150	SYNJ1	95	87.127	Erinaceus_europaeus
ENSSSCG00000012035	SYNJ1	99	64.939	ENSELUG00000009731	synj1	95	63.931	Esox_lucius
ENSSSCG00000012035	SYNJ1	100	95.712	ENSFCAG00000012498	SYNJ1	100	95.712	Felis_catus
ENSSSCG00000012035	SYNJ1	75	77.834	ENSFALG00000004680	SYNJ1	100	63.867	Ficedula_albicollis
ENSSSCG00000012035	SYNJ1	100	93.328	ENSFDAG00000016818	SYNJ1	100	98.557	Fukomys_damarensis
ENSSSCG00000012035	SYNJ1	99	66.791	ENSFHEG00000017689	synj1	96	60.994	Fundulus_heteroclitus
ENSSSCG00000012035	SYNJ1	78	72.493	ENSGMOG00000014852	synj1	77	72.228	Gadus_morhua
ENSSSCG00000012035	SYNJ1	100	82.948	ENSGALG00000034317	SYNJ1	100	77.892	Gallus_gallus
ENSSSCG00000012035	SYNJ1	99	65.576	ENSGAFG00000019466	synj1	96	61.017	Gambusia_affinis
ENSSSCG00000012035	SYNJ1	99	63.963	ENSGACG00000020575	synj1	99	63.099	Gasterosteus_aculeatus
ENSSSCG00000012035	SYNJ1	100	85.105	ENSGAGG00000022523	SYNJ1	99	85.174	Gopherus_agassizii
ENSSSCG00000012035	SYNJ1	100	93.784	ENSGGOG00000015945	SYNJ1	100	93.630	Gorilla_gorilla
ENSSSCG00000012035	SYNJ1	100	67.548	ENSHBUG00000007774	synj1	100	68.626	Haplochromis_burtoni
ENSSSCG00000012035	SYNJ1	100	92.949	ENSHGLG00000006420	SYNJ1	100	98.268	Heterocephalus_glaber_female
ENSSSCG00000012035	SYNJ1	99	92.917	ENSHGLG00100012591	SYNJ1	100	98.268	Heterocephalus_glaber_male
ENSSSCG00000012035	SYNJ1	99	64.341	ENSHCOG00000012774	synj1	96	65.571	Hippocampus_comes
ENSSSCG00000012035	SYNJ1	99	68.561	ENSIPUG00000010691	SYNJ1	95	63.684	Ictalurus_punctatus
ENSSSCG00000012035	SYNJ1	100	93.935	ENSSTOG00000015806	SYNJ1	100	93.935	Ictidomys_tridecemlineatus
ENSSSCG00000012035	SYNJ1	98	87.132	ENSJJAG00000020168	Synj1	100	77.729	Jaculus_jaculus
ENSSSCG00000012035	SYNJ1	85	74.639	ENSKMAG00000004221	synj1	94	73.358	Kryptolebias_marmoratus
ENSSSCG00000012035	SYNJ1	100	65.846	ENSLBEG00000015081	synj1	96	63.561	Labrus_bergylta
ENSSSCG00000012035	SYNJ1	100	74.346	ENSLACG00000005928	SYNJ1	98	65.565	Latimeria_chalumnae
ENSSSCG00000012035	SYNJ1	100	74.111	ENSLOCG00000009230	synj1	88	73.613	Lepisosteus_oculatus
ENSSSCG00000012035	SYNJ1	99	93.145	ENSLAFG00000011806	SYNJ1	99	82.899	Loxodonta_africana
ENSSSCG00000012035	SYNJ1	98	93.166	ENSMFAG00000018883	SYNJ1	99	93.666	Macaca_fascicularis
ENSSSCG00000012035	SYNJ1	100	93.797	ENSMMUG00000004624	SYNJ1	100	93.646	Macaca_mulatta
ENSSSCG00000012035	SYNJ1	100	94.011	ENSMNEG00000040077	SYNJ1	100	88.867	Macaca_nemestrina
ENSSSCG00000012035	SYNJ1	100	94.167	ENSMLEG00000037029	SYNJ1	100	94.014	Mandrillus_leucophaeus
ENSSSCG00000012035	SYNJ1	99	67.144	ENSMAMG00000013404	synj1	88	64.566	Mastacembelus_armatus
ENSSSCG00000012035	SYNJ1	85	74.775	ENSMZEG00005024358	synj1	99	68.316	Maylandia_zebra
ENSSSCG00000012035	SYNJ1	100	83.508	ENSMGAG00000014522	SYNJ1	100	75.346	Meleagris_gallopavo
ENSSSCG00000012035	SYNJ1	100	91.812	ENSMAUG00000009743	Synj1	100	96.681	Mesocricetus_auratus
ENSSSCG00000012035	SYNJ1	100	94.167	ENSMICG00000034953	SYNJ1	100	94.014	Microcebus_murinus
ENSSSCG00000012035	SYNJ1	89	73.008	ENSMMOG00000010203	synj1	96	68.122	Mola_mola
ENSSSCG00000012035	SYNJ1	99	80.719	ENSMODG00000021073	SYNJ1	100	79.501	Monodelphis_domestica
ENSSSCG00000012035	SYNJ1	99	66.892	ENSMALG00000014015	synj1	96	61.509	Monopterus_albus
ENSSSCG00000012035	SYNJ1	100	91.970	MGP_CAROLIEiJ_G0020951	Synj1	100	97.403	Mus_caroli
ENSSSCG00000012035	SYNJ1	100	92.424	ENSMUSG00000022973	Synj1	100	97.835	Mus_musculus
ENSSSCG00000012035	SYNJ1	100	92.348	MGP_PahariEiJ_G0016656	Synj1	100	97.547	Mus_pahari
ENSSSCG00000012035	SYNJ1	100	92.576	MGP_SPRETEiJ_G0021857	Synj1	100	97.835	Mus_spretus
ENSSSCG00000012035	SYNJ1	99	94.545	ENSMPUG00000001153	SYNJ1	100	85.472	Mustela_putorius_furo
ENSSSCG00000012035	SYNJ1	52	94.667	ENSMLUG00000026584	-	100	94.667	Myotis_lucifugus
ENSSSCG00000012035	SYNJ1	61	83.171	ENSMLUG00000005764	-	75	82.882	Myotis_lucifugus
ENSSSCG00000012035	SYNJ1	100	92.570	ENSNGAG00000000453	Synj1	100	97.403	Nannospalax_galili
ENSSSCG00000012035	SYNJ1	85	71.235	ENSNBRG00000011936	synj1	99	62.259	Neolamprologus_brichardi
ENSSSCG00000012035	SYNJ1	88	89.990	ENSNLEG00000003734	SYNJ1	100	89.310	Nomascus_leucogenys
ENSSSCG00000012035	SYNJ1	88	76.148	ENSMEUG00000004158	-	73	75.821	Notamacropus_eugenii
ENSSSCG00000012035	SYNJ1	93	92.831	ENSOPRG00000013602	SYNJ1	93	92.831	Ochotona_princeps
ENSSSCG00000012035	SYNJ1	54	96.576	ENSODEG00000002409	-	100	97.980	Octodon_degus
ENSSSCG00000012035	SYNJ1	99	69.394	ENSONIG00000004667	synj1	100	65.825	Oreochromis_niloticus
ENSSSCG00000012035	SYNJ1	97	85.019	ENSOANG00000006929	SYNJ1	95	76.554	Ornithorhynchus_anatinus
ENSSSCG00000012035	SYNJ1	98	91.438	ENSOCUG00000001420	SYNJ1	100	83.535	Oryctolagus_cuniculus
ENSSSCG00000012035	SYNJ1	85	75.023	ENSORLG00000004320	synj1	96	69.254	Oryzias_latipes
ENSSSCG00000012035	SYNJ1	85	73.195	ENSORLG00020011994	synj1	98	66.439	Oryzias_latipes_hni
ENSSSCG00000012035	SYNJ1	85	74.910	ENSORLG00015018077	synj1	93	60.402	Oryzias_latipes_hsok
ENSSSCG00000012035	SYNJ1	85	74.549	ENSOMEG00000014322	synj1	99	66.816	Oryzias_melastigma
ENSSSCG00000012035	SYNJ1	99	89.342	ENSOGAG00000006010	SYNJ1	98	80.428	Otolemur_garnettii
ENSSSCG00000012035	SYNJ1	99	93.788	ENSOARG00000013414	SYNJ1	97	87.327	Ovis_aries
ENSSSCG00000012035	SYNJ1	100	94.167	ENSPPAG00000026784	SYNJ1	100	94.014	Pan_paniscus
ENSSSCG00000012035	SYNJ1	100	95.789	ENSPPRG00000023469	SYNJ1	100	95.789	Panthera_pardus
ENSSSCG00000012035	SYNJ1	100	95.712	ENSPTIG00000007930	SYNJ1	100	95.712	Panthera_tigris_altaica
ENSSSCG00000012035	SYNJ1	100	94.167	ENSPTRG00000023787	SYNJ1	100	94.014	Pan_troglodytes
ENSSSCG00000012035	SYNJ1	100	93.173	ENSPTRG00000048135	-	99	93.918	Pan_troglodytes
ENSSSCG00000012035	SYNJ1	100	94.167	ENSPANG00000022531	SYNJ1	100	94.014	Papio_anubis
ENSSSCG00000012035	SYNJ1	89	76.280	ENSPKIG00000022603	synj1	95	75.291	Paramormyrops_kingsleyae
ENSSSCG00000012035	SYNJ1	85	74.751	ENSPMGG00000016831	synj1	90	66.819	Periophthalmus_magnuspinnatus
ENSSSCG00000012035	SYNJ1	100	92.798	ENSPEMG00000018767	Synj1	100	97.114	Peromyscus_maniculatus_bairdii
ENSSSCG00000012035	SYNJ1	79	60.828	ENSPMAG00000002887	synj1	96	52.812	Petromyzon_marinus
ENSSSCG00000012035	SYNJ1	100	86.103	ENSPCIG00000016372	SYNJ1	99	86.107	Phascolarctos_cinereus
ENSSSCG00000012035	SYNJ1	85	75.455	ENSPFOG00000016886	synj1	100	66.277	Poecilia_formosa
ENSSSCG00000012035	SYNJ1	85	74.753	ENSPLAG00000017559	synj1	97	68.045	Poecilia_latipinna
ENSSSCG00000012035	SYNJ1	99	64.104	ENSPMEG00000007643	synj1	89	64.634	Poecilia_mexicana
ENSSSCG00000012035	SYNJ1	100	66.495	ENSPREG00000012412	synj1	99	67.209	Poecilia_reticulata
ENSSSCG00000012035	SYNJ1	99	93.177	ENSPPYG00000011365	SYNJ1	93	93.298	Pongo_abelii
ENSSSCG00000012035	SYNJ1	89	94.286	ENSPCAG00000009906	SYNJ1	81	94.286	Procavia_capensis
ENSSSCG00000012035	SYNJ1	93	91.919	ENSPCOG00000024841	SYNJ1	100	87.097	Propithecus_coquereli
ENSSSCG00000012035	SYNJ1	99	90.480	ENSPVAG00000000892	SYNJ1	100	82.598	Pteropus_vampyrus
ENSSSCG00000012035	SYNJ1	84	74.522	ENSPNYG00000022989	synj1	100	66.301	Pundamilia_nyererei
ENSSSCG00000012035	SYNJ1	85	76.839	ENSPNAG00000021119	synj1	91	76.791	Pygocentrus_nattereri
ENSSSCG00000012035	SYNJ1	100	92.249	ENSRNOG00000002051	Synj1	100	92.018	Rattus_norvegicus
ENSSSCG00000012035	SYNJ1	100	93.937	ENSRBIG00000034477	SYNJ1	100	93.784	Rhinopithecus_bieti
ENSSSCG00000012035	SYNJ1	100	94.091	ENSRROG00000039256	SYNJ1	100	93.937	Rhinopithecus_roxellana
ENSSSCG00000012035	SYNJ1	100	93.482	ENSSBOG00000021001	SYNJ1	100	93.328	Saimiri_boliviensis_boliviensis
ENSSSCG00000012035	SYNJ1	99	83.935	ENSSHAG00000008538	SYNJ1	99	75.412	Sarcophilus_harrisii
ENSSSCG00000012035	SYNJ1	99	70.864	ENSSFOG00015006095	synj1	95	64.164	Scleropages_formosus
ENSSSCG00000012035	SYNJ1	99	67.685	ENSSMAG00000018066	synj1	95	66.742	Scophthalmus_maximus
ENSSSCG00000012035	SYNJ1	99	66.815	ENSSDUG00000013058	synj1	88	64.734	Seriola_dumerili
ENSSSCG00000012035	SYNJ1	100	67.507	ENSSLDG00000021406	synj1	97	67.116	Seriola_lalandi_dorsalis
ENSSSCG00000012035	SYNJ1	68	97.368	ENSSARG00000009490	SYNJ1	68	95.514	Sorex_araneus
ENSSSCG00000012035	SYNJ1	100	83.063	ENSSPUG00000012552	SYNJ1	94	79.863	Sphenodon_punctatus
ENSSSCG00000012035	SYNJ1	80	73.913	ENSSPAG00000006812	SYNJ1	95	60.222	Stegastes_partitus
ENSSSCG00000012035	SYNJ1	99	65.281	ENSSPAG00000017029	synj1	98	66.372	Stegastes_partitus
ENSSSCG00000012035	SYNJ1	100	83.521	ENSTGUG00000013445	SYNJ1	100	71.544	Taeniopygia_guttata
ENSSSCG00000012035	SYNJ1	100	67.334	ENSTRUG00000006907	synj1	97	67.348	Takifugu_rubripes
ENSSSCG00000012035	SYNJ1	99	67.393	ENSTNIG00000009940	synj1	99	65.089	Tetraodon_nigroviridis
ENSSSCG00000012035	SYNJ1	92	86.364	ENSTBEG00000016298	SYNJ1	90	86.364	Tupaia_belangeri
ENSSSCG00000012035	SYNJ1	99	85.910	ENSTTRG00000002222	SYNJ1	100	82.636	Tursiops_truncatus
ENSSSCG00000012035	SYNJ1	100	93.173	ENSUAMG00000018606	SYNJ1	99	97.803	Ursus_americanus
ENSSSCG00000012035	SYNJ1	100	92.668	ENSUMAG00000018419	SYNJ1	99	97.803	Ursus_maritimus
ENSSSCG00000012035	SYNJ1	86	100.000	ENSVPAG00000001241	SYNJ1	84	100.000	Vicugna_pacos
ENSSSCG00000012035	SYNJ1	100	95.375	ENSVVUG00000023125	SYNJ1	100	95.224	Vulpes_vulpes
ENSSSCG00000012035	SYNJ1	100	76.694	ENSXETG00000009899	synj1	97	66.432	Xenopus_tropicalis
ENSSSCG00000012035	SYNJ1	85	75.294	ENSXCOG00000011896	synj1	99	67.825	Xiphophorus_couchianus
ENSSSCG00000012035	SYNJ1	99	67.342	ENSXMAG00000017524	synj1	100	68.769	Xiphophorus_maculatus