EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000012291 (Gene tree)
Gene ID: 100511851
Gene Symbol: GPKOW
Alias: GPATC5|GPATCH5|Spp2|T54
Full Name: G-patch domain and KOW motifs
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 15067 bases
Position: chrX:43177130-43192196
Accession: 100511851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000013080	KOW	PF00467.29	2.1e-12	1	1
ENSSSCP00000029649	KOW	PF00467.29	2.1e-12	1	1
ENSSSCP00000038631	KOW	PF00467.29	2.2e-12	1	1
ENSSSCP00000038631	G-patch	PF01585.23	6.6e-05	1	1
ENSSSCP00000013080	G-patch	PF01585.23	6.7e-05	1	1
ENSSSCP00000029649	G-patch	PF01585.23	6.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000035742	GPKOW-201	1962	XM_021080007	ENSSSCP00000029649	481 (aa)	XP_020935666	F1RW48
ENSSSCT00000013440	GPKOW-202	1942	XM_003135077	ENSSSCP00000013080	481 (aa)	XP_003135125	F1RW48
ENSSSCT00000047071	GPKOW-203	2348	-	ENSSSCP00000038631	484 (aa)	-	A0A287A415

Gene Model

Click here to download ENSSSCG00000012291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012291	GPKOW	100	82.099	ENSG00000068394	GPKOW	100	82.099	Homo_sapiens
ENSSSCG00000012291	GPKOW	95	46.640	ENSAPOG00000004970	gpkow	95	46.640	Acanthochromis_polyacanthus
ENSSSCG00000012291	GPKOW	100	84.600	ENSAMEG00000012303	GPKOW	100	84.600	Ailuropoda_melanoleuca
ENSSSCG00000012291	GPKOW	98	44.854	ENSACIG00000010755	gpkow	98	44.854	Amphilophus_citrinellus
ENSSSCG00000012291	GPKOW	96	45.918	ENSAOCG00000022818	gpkow	94	46.531	Amphiprion_ocellaris
ENSSSCG00000012291	GPKOW	96	45.935	ENSAPEG00000021416	gpkow	95	46.748	Amphiprion_percula
ENSSSCG00000012291	GPKOW	95	45.272	ENSATEG00000023744	gpkow	94	45.473	Anabas_testudineus
ENSSSCG00000012291	GPKOW	99	50.203	ENSACAG00000016598	GPKOW	98	50.203	Anolis_carolinensis
ENSSSCG00000012291	GPKOW	97	70.149	ENSANAG00000036571	-	95	81.841	Aotus_nancymaae
ENSSSCG00000012291	GPKOW	100	73.045	ENSANAG00000033498	-	100	73.045	Aotus_nancymaae
ENSSSCG00000012291	GPKOW	100	79.835	ENSANAG00000030473	-	100	79.835	Aotus_nancymaae
ENSSSCG00000012291	GPKOW	60	43.478	ENSAMXG00000039266	gpkow	87	43.478	Astyanax_mexicanus
ENSSSCG00000012291	GPKOW	100	85.714	ENSBTAG00000002568	GPKOW	100	85.714	Bos_taurus
ENSSSCG00000012291	GPKOW	100	78.807	ENSCJAG00000002656	GPKOW	100	78.807	Callithrix_jacchus
ENSSSCG00000012291	GPKOW	100	83.745	ENSCAFG00000015794	GPKOW	100	83.745	Canis_familiaris
ENSSSCG00000012291	GPKOW	100	83.745	ENSCAFG00020020258	GPKOW	100	83.745	Canis_lupus_dingo
ENSSSCG00000012291	GPKOW	100	85.655	ENSCHIG00000013277	GPKOW	100	85.655	Capra_hircus
ENSSSCG00000012291	GPKOW	100	82.305	ENSTSYG00000033182	-	100	82.305	Carlito_syrichta
ENSSSCG00000012291	GPKOW	100	76.132	ENSTSYG00000029374	-	100	76.132	Carlito_syrichta
ENSSSCG00000012291	GPKOW	80	80.729	ENSCAPG00000011329	GPKOW	100	80.729	Cavia_aperea
ENSSSCG00000012291	GPKOW	100	77.778	ENSCPOG00000013270	GPKOW	100	77.778	Cavia_porcellus
ENSSSCG00000012291	GPKOW	100	77.984	ENSCCAG00000034660	-	100	77.984	Cebus_capucinus
ENSSSCG00000012291	GPKOW	99	71.134	ENSCCAG00000022161	-	99	71.134	Cebus_capucinus
ENSSSCG00000012291	GPKOW	100	82.922	ENSCATG00000041433	GPKOW	100	82.922	Cercocebus_atys
ENSSSCG00000012291	GPKOW	100	69.672	ENSCLAG00000007117	-	95	69.672	Chinchilla_lanigera
ENSSSCG00000012291	GPKOW	100	77.160	ENSCLAG00000002220	-	100	77.160	Chinchilla_lanigera
ENSSSCG00000012291	GPKOW	100	82.510	ENSCSAG00000012926	GPKOW	100	82.510	Chlorocebus_sabaeus
ENSSSCG00000012291	GPKOW	96	50.716	ENSCPBG00000016609	GPKOW	95	51.318	Chrysemys_picta_bellii
ENSSSCG00000012291	GPKOW	66	35.061	ENSCING00000020813	-	88	35.629	Ciona_intestinalis
ENSSSCG00000012291	GPKOW	100	82.716	ENSCANG00000037595	GPKOW	100	82.716	Colobus_angolensis_palliatus
ENSSSCG00000012291	GPKOW	98	72.765	ENSCGRG00001016210	Gpkow	98	72.765	Cricetulus_griseus_chok1gshd
ENSSSCG00000012291	GPKOW	98	72.765	ENSCGRG00000013835	Gpkow	98	72.765	Cricetulus_griseus_crigri
ENSSSCG00000012291	GPKOW	97	44.158	ENSCSEG00000020569	gpkow	98	44.752	Cynoglossus_semilaevis
ENSSSCG00000012291	GPKOW	96	45.233	ENSCVAG00000017066	gpkow	95	45.233	Cyprinodon_variegatus
ENSSSCG00000012291	GPKOW	97	47.154	ENSDARG00000029612	gpkow	96	47.154	Danio_rerio
ENSSSCG00000012291	GPKOW	100	80.453	ENSDNOG00000016647	GPKOW	99	82.135	Dasypus_novemcinctus
ENSSSCG00000012291	GPKOW	100	68.107	ENSDORG00000013663	Gpkow	100	68.107	Dipodomys_ordii
ENSSSCG00000012291	GPKOW	77	40.000	ENSEBUG00000001912	gpkow	92	40.000	Eptatretus_burgeri
ENSSSCG00000012291	GPKOW	100	81.276	ENSEASG00005019852	GPKOW	100	81.276	Equus_asinus_asinus
ENSSSCG00000012291	GPKOW	100	87.654	ENSECAG00000018251	GPKOW	100	87.654	Equus_caballus
ENSSSCG00000012291	GPKOW	100	70.782	ENSEEUG00000008839	GPKOW	100	70.782	Erinaceus_europaeus
ENSSSCG00000012291	GPKOW	97	45.257	ENSELUG00000022223	gpkow	95	45.817	Esox_lucius
ENSSSCG00000012291	GPKOW	100	85.185	ENSFCAG00000003818	GPKOW	100	85.185	Felis_catus
ENSSSCG00000012291	GPKOW	100	80.247	ENSFDAG00000001669	GPKOW	100	80.247	Fukomys_damarensis
ENSSSCG00000012291	GPKOW	96	45.175	ENSFHEG00000022349	gpkow	93	45.175	Fundulus_heteroclitus
ENSSSCG00000012291	GPKOW	97	44.513	ENSGMOG00000019661	gpkow	96	44.513	Gadus_morhua
ENSSSCG00000012291	GPKOW	95	43.086	ENSGACG00000012127	gpkow	95	43.086	Gasterosteus_aculeatus
ENSSSCG00000012291	GPKOW	93	46.491	ENSGAGG00000006302	GPKOW	99	49.409	Gopherus_agassizii
ENSSSCG00000012291	GPKOW	100	81.893	ENSGGOG00000013685	GPKOW	100	81.893	Gorilla_gorilla
ENSSSCG00000012291	GPKOW	95	46.169	ENSHBUG00000010655	gpkow	87	45.968	Haplochromis_burtoni
ENSSSCG00000012291	GPKOW	100	80.247	ENSHGLG00000002746	GPKOW	100	80.247	Heterocephalus_glaber_female
ENSSSCG00000012291	GPKOW	100	80.041	ENSHGLG00100014283	GPKOW	100	80.041	Heterocephalus_glaber_male
ENSSSCG00000012291	GPKOW	97	45.809	ENSIPUG00000008342	gpkow	97	45.809	Ictalurus_punctatus
ENSSSCG00000012291	GPKOW	100	81.031	ENSSTOG00000014593	GPKOW	100	81.031	Ictidomys_tridecemlineatus
ENSSSCG00000012291	GPKOW	100	76.613	ENSJJAG00000013397	Gpkow	100	76.613	Jaculus_jaculus
ENSSSCG00000012291	GPKOW	96	46.813	ENSKMAG00000006241	gpkow	96	47.316	Kryptolebias_marmoratus
ENSSSCG00000012291	GPKOW	97	45.545	ENSLBEG00000013238	gpkow	96	45.545	Labrus_bergylta
ENSSSCG00000012291	GPKOW	54	51.163	ENSLACG00000003399	gpkow	91	51.163	Latimeria_chalumnae
ENSSSCG00000012291	GPKOW	96	47.581	ENSLOCG00000014776	gpkow	95	47.581	Lepisosteus_oculatus
ENSSSCG00000012291	GPKOW	100	83.162	ENSLAFG00000005896	GPKOW	100	83.162	Loxodonta_africana
ENSSSCG00000012291	GPKOW	100	82.716	ENSMFAG00000035346	GPKOW	100	82.716	Macaca_fascicularis
ENSSSCG00000012291	GPKOW	100	82.716	ENSMMUG00000020557	GPKOW	96	82.716	Macaca_mulatta
ENSSSCG00000012291	GPKOW	100	82.510	ENSMNEG00000004803	GPKOW	100	82.510	Macaca_nemestrina
ENSSSCG00000012291	GPKOW	100	82.510	ENSMLEG00000033293	GPKOW	100	82.510	Mandrillus_leucophaeus
ENSSSCG00000012291	GPKOW	96	44.622	ENSMAMG00000024235	gpkow	95	45.732	Mastacembelus_armatus
ENSSSCG00000012291	GPKOW	95	46.169	ENSMZEG00005026357	gpkow	87	45.968	Maylandia_zebra
ENSSSCG00000012291	GPKOW	100	82.099	ENSMICG00000045083	GPKOW	100	82.099	Microcebus_murinus
ENSSSCG00000012291	GPKOW	100	74.593	ENSMOCG00000019251	Gpkow	100	74.593	Microtus_ochrogaster
ENSSSCG00000012291	GPKOW	91	53.020	ENSMODG00000011443	-	100	54.279	Monodelphis_domestica
ENSSSCG00000012291	GPKOW	99	52.610	ENSMODG00000023705	-	100	53.012	Monodelphis_domestica
ENSSSCG00000012291	GPKOW	96	42.008	ENSMALG00000015148	gpkow	95	42.213	Monopterus_albus
ENSSSCG00000012291	GPKOW	83	73.659	MGP_CAROLIEiJ_G0032893	Gpkow	100	66.298	Mus_caroli
ENSSSCG00000012291	GPKOW	96	75.105	ENSMUSG00000031148	Gpkow	98	74.689	Mus_musculus
ENSSSCG00000012291	GPKOW	96	75.105	MGP_PahariEiJ_G0031441	Gpkow	98	74.689	Mus_pahari
ENSSSCG00000012291	GPKOW	100	82.438	ENSMPUG00000013808	GPKOW	100	82.438	Mustela_putorius_furo
ENSSSCG00000012291	GPKOW	61	71.380	ENSMLUG00000009281	-	95	71.380	Myotis_lucifugus
ENSSSCG00000012291	GPKOW	100	73.279	ENSNGAG00000005382	Gpkow	100	73.279	Nannospalax_galili
ENSSSCG00000012291	GPKOW	95	46.169	ENSNBRG00000008941	gpkow	94	45.968	Neolamprologus_brichardi
ENSSSCG00000012291	GPKOW	100	80.864	ENSNLEG00000007998	GPKOW	100	80.864	Nomascus_leucogenys
ENSSSCG00000012291	GPKOW	52	56.972	ENSMEUG00000007467	-	79	56.972	Notamacropus_eugenii
ENSSSCG00000012291	GPKOW	80	66.667	ENSOPRG00000016412	-	80	66.667	Ochotona_princeps
ENSSSCG00000012291	GPKOW	95	46.371	ENSONIG00000016834	gpkow	87	46.169	Oreochromis_niloticus
ENSSSCG00000012291	GPKOW	100	67.755	ENSOCUG00000010422	GPKOW	100	67.959	Oryctolagus_cuniculus
ENSSSCG00000012291	GPKOW	96	42.742	ENSORLG00000014442	gpkow	95	43.347	Oryzias_latipes
ENSSSCG00000012291	GPKOW	96	42.540	ENSORLG00020012795	gpkow	95	43.145	Oryzias_latipes_hni
ENSSSCG00000012291	GPKOW	96	42.742	ENSORLG00015006852	gpkow	95	43.347	Oryzias_latipes_hsok
ENSSSCG00000012291	GPKOW	96	44.930	ENSOMEG00000003236	gpkow	95	45.875	Oryzias_melastigma
ENSSSCG00000012291	GPKOW	100	70.165	ENSOGAG00000003644	GPKOW	100	70.165	Otolemur_garnettii
ENSSSCG00000012291	GPKOW	100	85.239	ENSOARG00000010927	GPKOW	100	85.239	Ovis_aries
ENSSSCG00000012291	GPKOW	100	81.893	ENSPPAG00000040116	GPKOW	100	81.893	Pan_paniscus
ENSSSCG00000012291	GPKOW	100	84.979	ENSPPRG00000016972	GPKOW	100	84.979	Panthera_pardus
ENSSSCG00000012291	GPKOW	100	84.742	ENSPTIG00000008398	GPKOW	100	84.742	Panthera_tigris_altaica
ENSSSCG00000012291	GPKOW	100	82.099	ENSPTRG00000047603	GPKOW	100	82.099	Pan_troglodytes
ENSSSCG00000012291	GPKOW	100	82.922	ENSPANG00000013477	GPKOW	100	82.922	Papio_anubis
ENSSSCG00000012291	GPKOW	95	45.816	ENSPKIG00000008382	gpkow	93	46.234	Paramormyrops_kingsleyae
ENSSSCG00000012291	GPKOW	95	45.621	ENSPMGG00000010880	gpkow	94	45.621	Periophthalmus_magnuspinnatus
ENSSSCG00000012291	GPKOW	100	73.116	ENSPEMG00000009966	Gpkow	100	73.116	Peromyscus_maniculatus_bairdii
ENSSSCG00000012291	GPKOW	97	43.164	ENSPMAG00000003497	gpkow	96	43.050	Petromyzon_marinus
ENSSSCG00000012291	GPKOW	96	46.122	ENSPFOG00000003065	gpkow	94	45.547	Poecilia_formosa
ENSSSCG00000012291	GPKOW	96	46.122	ENSPLAG00000023097	gpkow	93	45.714	Poecilia_latipinna
ENSSSCG00000012291	GPKOW	96	46.327	ENSPMEG00000002762	gpkow	94	45.749	Poecilia_mexicana
ENSSSCG00000012291	GPKOW	64	49.080	ENSPREG00000002671	gpkow	99	48.466	Poecilia_reticulata
ENSSSCG00000012291	GPKOW	78	86.111	ENSPPYG00000020334	-	99	86.111	Pongo_abelii
ENSSSCG00000012291	GPKOW	100	82.305	ENSPCOG00000008505	GPKOW	100	82.305	Propithecus_coquereli
ENSSSCG00000012291	GPKOW	95	45.968	ENSPNYG00000014523	gpkow	94	45.968	Pundamilia_nyererei
ENSSSCG00000012291	GPKOW	98	45.720	ENSPNAG00000008360	gpkow	96	45.720	Pygocentrus_nattereri
ENSSSCG00000012291	GPKOW	96	75.687	ENSRNOG00000022939	Gpkow	98	75.676	Rattus_norvegicus
ENSSSCG00000012291	GPKOW	95	83.043	ENSRBIG00000027885	GPKOW	99	83.043	Rhinopithecus_bieti
ENSSSCG00000012291	GPKOW	100	81.687	ENSRROG00000037604	GPKOW	100	81.687	Rhinopithecus_roxellana
ENSSSCG00000012291	GPKOW	100	79.835	ENSSBOG00000032042	-	100	79.835	Saimiri_boliviensis_boliviensis
ENSSSCG00000012291	GPKOW	99	68.454	ENSSBOG00000024861	-	98	68.454	Saimiri_boliviensis_boliviensis
ENSSSCG00000012291	GPKOW	54	52.830	ENSSHAG00000004719	-	99	52.830	Sarcophilus_harrisii
ENSSSCG00000012291	GPKOW	95	47.454	ENSSFOG00015009901	gpkow	93	47.454	Scleropages_formosus
ENSSSCG00000012291	GPKOW	95	46.122	ENSSMAG00000013323	gpkow	94	46.122	Scophthalmus_maximus
ENSSSCG00000012291	GPKOW	96	45.817	ENSSDUG00000023134	gpkow	96	45.817	Seriola_dumerili
ENSSSCG00000012291	GPKOW	96	46.016	ENSSLDG00000024756	gpkow	96	46.016	Seriola_lalandi_dorsalis
ENSSSCG00000012291	GPKOW	95	70.346	ENSSARG00000003351	GPKOW	100	75.758	Sorex_araneus
ENSSSCG00000012291	GPKOW	95	46.708	ENSSPAG00000015503	gpkow	97	46.914	Stegastes_partitus
ENSSSCG00000012291	GPKOW	96	43.177	ENSTRUG00000000616	gpkow	94	43.177	Takifugu_rubripes
ENSSSCG00000012291	GPKOW	95	44.915	ENSTNIG00000012502	gpkow	95	44.915	Tetraodon_nigroviridis
ENSSSCG00000012291	GPKOW	80	81.024	ENSTBEG00000004087	GPKOW	80	81.024	Tupaia_belangeri
ENSSSCG00000012291	GPKOW	99	86.042	ENSTTRG00000008579	GPKOW	100	86.042	Tursiops_truncatus
ENSSSCG00000012291	GPKOW	90	84.510	ENSUAMG00000026502	GPKOW	100	84.510	Ursus_americanus
ENSSSCG00000012291	GPKOW	84	86.352	ENSUMAG00000007072	GPKOW	79	86.352	Ursus_maritimus
ENSSSCG00000012291	GPKOW	100	83.539	ENSVVUG00000017815	GPKOW	100	83.539	Vulpes_vulpes
ENSSSCG00000012291	GPKOW	97	48.340	ENSXETG00000007727	gpkow	99	48.340	Xenopus_tropicalis
ENSSSCG00000012291	GPKOW	96	46.817	ENSXCOG00000014306	gpkow	95	46.232	Xiphophorus_couchianus
ENSSSCG00000012291	GPKOW	96	46.626	ENSXMAG00000018216	gpkow	93	46.830	Xiphophorus_maculatus