EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000012315 (Gene tree)
Gene ID: 100516167
Gene Symbol: SYNJ2
Alias: INPP5H
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 94858 bases
Position: chr1:9014209-9109066
Accession: 100516167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000027068	Exo_endo_phos	PF03372.23	2.9e-14	1	1
ENSSSCP00000020455	Exo_endo_phos	PF03372.23	3.4e-14	1	1
ENSSSCP00000027068	DUF1866	PF08952.11	6.4e-57	1	1
ENSSSCP00000020455	DUF1866	PF08952.11	7.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000032465	SYNJ2-202	5539	-	ENSSSCP00000027068	1279 (aa)	-	I3LSH5
ENSSSCT00000025405	SYNJ2-201	7235	XM_021086423	ENSSSCP00000020455	1402 (aa)	XP_020942082	I3L8U4

Gene Model

Click here to download ENSSSCG00000012315's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00562	Inositol phosphate metabolism	KEGG
ssc01100	Metabolic pathways	KEGG
ssc04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000012315	SYNJ2	83	53.358	ENSSSCG00000012035	SYNJ1	96	48.452

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012315	SYNJ2	100	89.441	ENSG00000078269	SYNJ2	99	91.852	Homo_sapiens
ENSSSCG00000012315	SYNJ2	94	90.758	ENSAMEG00000009581	SYNJ2	90	90.248	Ailuropoda_melanoleuca
ENSSSCG00000012315	SYNJ2	97	76.917	ENSAPLG00000002563	SYNJ2	90	73.368	Anas_platyrhynchos
ENSSSCG00000012315	SYNJ2	98	73.643	ENSACAG00000004945	SYNJ2	86	72.576	Anolis_carolinensis
ENSSSCG00000012315	SYNJ2	100	89.510	ENSANAG00000026575	SYNJ2	100	89.744	Aotus_nancymaae
ENSSSCG00000012315	SYNJ2	97	92.581	ENSBTAG00000000817	SYNJ2	87	92.171	Bos_taurus
ENSSSCG00000012315	SYNJ2	100	89.666	ENSCJAG00000003570	SYNJ2	100	89.899	Callithrix_jacchus
ENSSSCG00000012315	SYNJ2	94	92.090	ENSCAFG00000000644	SYNJ2	86	91.367	Canis_familiaris
ENSSSCG00000012315	SYNJ2	97	91.280	ENSCAFG00020015809	SYNJ2	98	85.257	Canis_lupus_dingo
ENSSSCG00000012315	SYNJ2	97	90.865	ENSCHIG00000011077	SYNJ2	87	90.447	Capra_hircus
ENSSSCG00000012315	SYNJ2	97	89.031	ENSTSYG00000014342	SYNJ2	97	89.952	Carlito_syrichta
ENSSSCG00000012315	SYNJ2	93	86.946	ENSCAPG00000000287	SYNJ2	97	85.824	Cavia_aperea
ENSSSCG00000012315	SYNJ2	97	90.638	ENSCPOG00000009144	SYNJ2	95	92.128	Cavia_porcellus
ENSSSCG00000012315	SYNJ2	100	89.122	ENSCCAG00000025484	SYNJ2	100	89.355	Cebus_capucinus
ENSSSCG00000012315	SYNJ2	100	89.441	ENSCATG00000042943	SYNJ2	100	89.674	Cercocebus_atys
ENSSSCG00000012315	SYNJ2	97	90.733	ENSCLAG00000004730	SYNJ2	100	82.797	Chinchilla_lanigera
ENSSSCG00000012315	SYNJ2	97	89.263	ENSCSAG00000013130	SYNJ2	87	88.462	Chlorocebus_sabaeus
ENSSSCG00000012315	SYNJ2	98	78.005	ENSCPBG00000016273	SYNJ2	86	76.596	Chrysemys_picta_bellii
ENSSSCG00000012315	SYNJ2	97	89.369	ENSCANG00000040349	SYNJ2	100	89.528	Colobus_angolensis_palliatus
ENSSSCG00000012315	SYNJ2	100	87.285	ENSCGRG00001004257	Synj2	97	85.114	Cricetulus_griseus_chok1gshd
ENSSSCG00000012315	SYNJ2	97	87.399	ENSCGRG00000001656	Synj2	97	85.114	Cricetulus_griseus_crigri
ENSSSCG00000012315	SYNJ2	95	77.523	ENSDNOG00000015900	SYNJ2	100	84.000	Dasypus_novemcinctus
ENSSSCG00000012315	SYNJ2	96	85.935	ENSDORG00000014128	Synj2	86	84.778	Dipodomys_ordii
ENSSSCG00000012315	SYNJ2	73	88.949	ENSETEG00000017418	SYNJ2	68	88.949	Echinops_telfairi
ENSSSCG00000012315	SYNJ2	97	92.010	ENSEASG00005018902	SYNJ2	87	91.311	Equus_asinus_asinus
ENSSSCG00000012315	SYNJ2	97	92.010	ENSECAG00000012646	SYNJ2	81	91.234	Equus_caballus
ENSSSCG00000012315	SYNJ2	100	91.634	ENSFCAG00000010854	SYNJ2	100	91.634	Felis_catus
ENSSSCG00000012315	SYNJ2	90	77.403	ENSFALG00000012593	SYNJ2	84	74.919	Ficedula_albicollis
ENSSSCG00000012315	SYNJ2	95	88.916	ENSFDAG00000016352	SYNJ2	99	85.217	Fukomys_damarensis
ENSSSCG00000012315	SYNJ2	97	77.295	ENSGALG00000013727	SYNJ2	86	75.910	Gallus_gallus
ENSSSCG00000012315	SYNJ2	97	78.327	ENSGAGG00000009857	SYNJ2	86	76.143	Gopherus_agassizii
ENSSSCG00000012315	SYNJ2	100	89.519	ENSGGOG00000012210	SYNJ2	100	89.752	Gorilla_gorilla
ENSSSCG00000012315	SYNJ2	97	90.315	ENSHGLG00000007534	SYNJ2	100	81.994	Heterocephalus_glaber_female
ENSSSCG00000012315	SYNJ2	96	90.278	ENSHGLG00100009973	SYNJ2	98	88.220	Heterocephalus_glaber_male
ENSSSCG00000012315	SYNJ2	95	88.462	ENSSTOG00000016474	SYNJ2	85	88.712	Ictidomys_tridecemlineatus
ENSSSCG00000012315	SYNJ2	94	87.970	ENSJJAG00000014436	Synj2	100	86.486	Jaculus_jaculus
ENSSSCG00000012315	SYNJ2	83	69.382	ENSLACG00000007316	SYNJ2	99	69.577	Latimeria_chalumnae
ENSSSCG00000012315	SYNJ2	94	86.836	ENSLAFG00000011979	SYNJ2	87	85.345	Loxodonta_africana
ENSSSCG00000012315	SYNJ2	92	90.972	ENSMFAG00000040552	SYNJ2	100	90.972	Macaca_fascicularis
ENSSSCG00000012315	SYNJ2	81	88.931	ENSMMUG00000007153	SYNJ2	100	89.218	Macaca_mulatta
ENSSSCG00000012315	SYNJ2	100	89.596	ENSMNEG00000017211	SYNJ2	100	89.829	Macaca_nemestrina
ENSSSCG00000012315	SYNJ2	97	85.817	ENSMLEG00000024911	SYNJ2	87	85.154	Mandrillus_leucophaeus
ENSSSCG00000012315	SYNJ2	94	76.288	ENSMGAG00000012839	SYNJ2	99	72.422	Meleagris_gallopavo
ENSSSCG00000012315	SYNJ2	98	88.809	ENSMAUG00000022212	Synj2	97	89.224	Mesocricetus_auratus
ENSSSCG00000012315	SYNJ2	100	87.801	ENSMICG00000015804	SYNJ2	100	88.034	Microcebus_murinus
ENSSSCG00000012315	SYNJ2	97	89.023	ENSMOCG00000020054	Synj2	97	89.419	Microtus_ochrogaster
ENSSSCG00000012315	SYNJ2	97	85.897	ENSMODG00000007783	SYNJ2	87	84.397	Monodelphis_domestica
ENSSSCG00000012315	SYNJ2	99	86.525	MGP_CAROLIEiJ_G0021026	Synj2	100	91.212	Mus_caroli
ENSSSCG00000012315	SYNJ2	98	87.290	ENSMUSG00000023805	Synj2	100	91.212	Mus_musculus
ENSSSCG00000012315	SYNJ2	98	87.620	MGP_PahariEiJ_G0023344	Synj2	100	91.061	Mus_pahari
ENSSSCG00000012315	SYNJ2	98	86.811	MGP_SPRETEiJ_G0021931	Synj2	100	90.758	Mus_spretus
ENSSSCG00000012315	SYNJ2	97	89.346	ENSMPUG00000005323	SYNJ2	97	88.596	Mustela_putorius_furo
ENSSSCG00000012315	SYNJ2	91	89.726	ENSMLUG00000000324	SYNJ2	88	89.245	Myotis_lucifugus
ENSSSCG00000012315	SYNJ2	97	89.334	ENSNGAG00000014859	Synj2	92	93.617	Nannospalax_galili
ENSSSCG00000012315	SYNJ2	100	85.240	ENSNLEG00000010750	SYNJ2	100	85.471	Nomascus_leucogenys
ENSSSCG00000012315	SYNJ2	88	82.759	ENSMEUG00000003493	SYNJ2	77	82.759	Notamacropus_eugenii
ENSSSCG00000012315	SYNJ2	89	78.947	ENSOPRG00000009648	SYNJ2	80	78.947	Ochotona_princeps
ENSSSCG00000012315	SYNJ2	97	89.663	ENSODEG00000007709	SYNJ2	94	91.702	Octodon_degus
ENSSSCG00000012315	SYNJ2	94	85.103	ENSOCUG00000004762	SYNJ2	87	85.362	Oryctolagus_cuniculus
ENSSSCG00000012315	SYNJ2	90	87.813	ENSOGAG00000000488	SYNJ2	100	87.986	Otolemur_garnettii
ENSSSCG00000012315	SYNJ2	94	91.930	ENSOARG00000004304	SYNJ2	92	89.599	Ovis_aries
ENSSSCG00000012315	SYNJ2	97	89.094	ENSPPAG00000028831	SYNJ2	87	88.068	Pan_paniscus
ENSSSCG00000012315	SYNJ2	100	91.321	ENSPPRG00000009068	SYNJ2	100	91.321	Panthera_pardus
ENSSSCG00000012315	SYNJ2	97	91.019	ENSPTIG00000018780	SYNJ2	97	91.019	Panthera_tigris_altaica
ENSSSCG00000012315	SYNJ2	100	89.519	ENSPTRG00000018739	SYNJ2	100	89.752	Pan_troglodytes
ENSSSCG00000012315	SYNJ2	100	89.519	ENSPANG00000010755	SYNJ2	100	89.752	Papio_anubis
ENSSSCG00000012315	SYNJ2	92	78.697	ENSPSIG00000014659	SYNJ2	85	76.574	Pelodiscus_sinensis
ENSSSCG00000012315	SYNJ2	94	89.037	ENSPEMG00000006247	Synj2	97	88.406	Peromyscus_maniculatus_bairdii
ENSSSCG00000012315	SYNJ2	97	85.337	ENSPCIG00000010179	SYNJ2	87	83.935	Phascolarctos_cinereus
ENSSSCG00000012315	SYNJ2	97	89.423	ENSPPYG00000017130	SYNJ2	87	88.462	Pongo_abelii
ENSSSCG00000012315	SYNJ2	79	87.097	ENSPCAG00000009217	SYNJ2	73	74.503	Procavia_capensis
ENSSSCG00000012315	SYNJ2	100	90.132	ENSPCOG00000026910	SYNJ2	100	90.132	Propithecus_coquereli
ENSSSCG00000012315	SYNJ2	97	86.855	ENSPVAG00000006131	SYNJ2	87	85.814	Pteropus_vampyrus
ENSSSCG00000012315	SYNJ2	98	85.410	ENSRNOG00000017114	Synj2	100	84.095	Rattus_norvegicus
ENSSSCG00000012315	SYNJ2	99	85.075	ENSRBIG00000044126	SYNJ2	100	85.008	Rhinopithecus_bieti
ENSSSCG00000012315	SYNJ2	100	89.441	ENSRROG00000027755	SYNJ2	100	89.596	Rhinopithecus_roxellana
ENSSSCG00000012315	SYNJ2	100	89.433	ENSSBOG00000034876	SYNJ2	100	89.666	Saimiri_boliviensis_boliviensis
ENSSSCG00000012315	SYNJ2	94	85.667	ENSSHAG00000018881	SYNJ2	86	84.057	Sarcophilus_harrisii
ENSSSCG00000012315	SYNJ2	97	74.010	ENSSPUG00000000491	SYNJ2	92	74.089	Sphenodon_punctatus
ENSSSCG00000012315	SYNJ2	94	76.151	ENSTGUG00000011082	SYNJ2	94	74.961	Taeniopygia_guttata
ENSSSCG00000012315	SYNJ2	76	80.781	ENSTBEG00000015827	SYNJ2	71	80.781	Tupaia_belangeri
ENSSSCG00000012315	SYNJ2	97	87.490	ENSTTRG00000009677	SYNJ2	87	87.413	Tursiops_truncatus
ENSSSCG00000012315	SYNJ2	78	84.200	ENSUMAG00000012826	SYNJ2	96	84.284	Ursus_maritimus
ENSSSCG00000012315	SYNJ2	78	87.097	ENSVVUG00000007407	SYNJ2	87	90.250	Vulpes_vulpes
ENSSSCG00000012315	SYNJ2	97	67.544	ENSXETG00000034066	synj2	79	67.806	Xenopus_tropicalis