EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000012473 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 6173 bases
Position: chrX:77644275-77650447
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000055703	RRM_1	PF00076.22	5.5e-23	1	2
ENSSSCP00000055703	RRM_1	PF00076.22	5.5e-23	2	2
ENSSSCP00000038927	RRM_1	PF00076.22	8.3e-23	1	2
ENSSSCP00000038927	RRM_1	PF00076.22	8.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000013640	-	1002	-	ENSSSCP00000038927	333 (aa)	-	A0A287A550
ENSSSCT00000033669	-	864	-	ENSSSCP00000055703	287 (aa)	-	A0A287BHU2

Gene Model

Click here to download ENSSSCG00000012473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000012473	-	65	34.737	ENSSSCG00000022528	DAZAP1	58	31.278
ENSSSCG00000012473	-	61	37.500	ENSSSCG00000029365	MSI1	53	37.500
ENSSSCG00000012473	-	66	56.614	ENSSSCG00000014031	-	82	46.552
ENSSSCG00000012473	-	59	33.908	ENSSSCG00000000288	HNRNPA1	83	32.103
ENSSSCG00000012473	-	59	35.057	ENSSSCG00000015988	HNRNPA3	73	31.071
ENSSSCG00000012473	-	62	39.894	ENSSSCG00000038505	MSI2	86	33.106
ENSSSCG00000012473	-	52	31.613	ENSSSCG00000040799	-	87	31.250
ENSSSCG00000012473	-	75	47.727	ENSSSCG00000009249	HNRNPD	81	47.163
ENSSSCG00000012473	-	64	33.333	ENSSSCG00000036350	HNRNPA2B1	86	33.333
ENSSSCG00000012473	-	67	31.034	ENSSSCG00000033635	-	60	31.163
ENSSSCG00000012473	-	61	32.402	ENSSSCG00000012503	-	58	32.663
ENSSSCG00000012473	-	63	68.132	ENSSSCG00000037245	-	77	52.280
ENSSSCG00000012473	-	64	48.387	ENSSSCG00000001932	-	81	46.479
ENSSSCG00000012473	-	67	30.049	ENSSSCG00000040926	-	60	30.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012473	-	67	65.104	ENSG00000152795	HNRNPDL	99	53.512	Homo_sapiens
ENSSSCG00000012473	-	66	67.021	ENSAMEG00000005145	-	83	52.848	Ailuropoda_melanoleuca
ENSSSCG00000012473	-	85	45.205	ENSAMEG00000007660	-	97	46.690	Ailuropoda_melanoleuca
ENSSSCG00000012473	-	66	70.779	ENSAPLG00000011774	HNRNPDL	99	53.409	Anas_platyrhynchos
ENSSSCG00000012473	-	96	49.141	ENSACAG00000010416	HNRNPDL	91	53.584	Anolis_carolinensis
ENSSSCG00000012473	-	63	68.132	ENSANAG00000029054	HNRNPDL	74	52.500	Aotus_nancymaae
ENSSSCG00000012473	-	86	47.333	ENSANAG00000038001	-	99	48.333	Aotus_nancymaae
ENSSSCG00000012473	-	67	73.196	ENSANAG00000030316	-	80	51.429	Aotus_nancymaae
ENSSSCG00000012473	-	68	63.218	ENSANAG00000035355	-	93	55.556	Aotus_nancymaae
ENSSSCG00000012473	-	96	50.174	ENSAMXG00000001495	hnrnpdl	96	51.724	Astyanax_mexicanus
ENSSSCG00000012473	-	63	68.132	ENSBTAG00000014804	HNRNPDL	77	51.976	Bos_taurus
ENSSSCG00000012473	-	67	64.796	ENSCJAG00000045227	-	82	59.565	Callithrix_jacchus
ENSSSCG00000012473	-	63	68.132	ENSCJAG00000015197	-	74	52.500	Callithrix_jacchus
ENSSSCG00000012473	-	63	68.132	ENSCAFG00000008940	HNRNPDL	77	51.976	Canis_familiaris
ENSSSCG00000012473	-	83	49.470	ENSCAFG00000000776	-	99	49.825	Canis_familiaris
ENSSSCG00000012473	-	63	68.132	ENSCAFG00020010699	-	77	51.976	Canis_lupus_dingo
ENSSSCG00000012473	-	63	68.132	ENSCHIG00000010260	-	77	51.976	Capra_hircus
ENSSSCG00000012473	-	63	53.846	ENSCHIG00000026667	-	61	48.684	Capra_hircus
ENSSSCG00000012473	-	66	69.939	ENSTSYG00000031074	-	100	55.311	Carlito_syrichta
ENSSSCG00000012473	-	66	54.211	ENSTSYG00000036907	-	92	54.229	Carlito_syrichta
ENSSSCG00000012473	-	56	51.250	ENSCAPG00000015955	-	100	42.593	Cavia_aperea
ENSSSCG00000012473	-	63	67.027	ENSCPOG00000015619	-	74	53.465	Cavia_porcellus
ENSSSCG00000012473	-	76	55.725	ENSCCAG00000020777	HNRNPDL	74	52.500	Cebus_capucinus
ENSSSCG00000012473	-	81	55.399	ENSCCAG00000020531	-	99	55.399	Cebus_capucinus
ENSSSCG00000012473	-	66	68.712	ENSCATG00000038573	-	69	53.986	Cercocebus_atys
ENSSSCG00000012473	-	66	65.608	ENSCATG00000030349	-	84	65.608	Cercocebus_atys
ENSSSCG00000012473	-	63	68.132	ENSCLAG00000008428	HNRNPDL	71	53.974	Chinchilla_lanigera
ENSSSCG00000012473	-	85	45.017	ENSCLAG00000010786	-	99	46.392	Chinchilla_lanigera
ENSSSCG00000012473	-	63	68.132	ENSCSAG00000004461	HNRNPDL	74	52.500	Chlorocebus_sabaeus
ENSSSCG00000012473	-	67	65.104	ENSCHOG00000010831	-	89	55.000	Choloepus_hoffmanni
ENSSSCG00000012473	-	66	68.182	ENSCHOG00000009204	-	100	53.962	Choloepus_hoffmanni
ENSSSCG00000012473	-	100	47.525	ENSCHOG00000003275	-	93	50.949	Choloepus_hoffmanni
ENSSSCG00000012473	-	66	69.325	ENSCHOG00000002938	-	100	54.945	Choloepus_hoffmanni
ENSSSCG00000012473	-	63	67.582	ENSCHOG00000000160	-	99	54.795	Choloepus_hoffmanni
ENSSSCG00000012473	-	97	49.492	ENSCPBG00000008014	HNRNPDL	96	53.716	Chrysemys_picta_bellii
ENSSSCG00000012473	-	66	70.552	ENSCANG00000020228	-	100	54.579	Colobus_angolensis_palliatus
ENSSSCG00000012473	-	66	69.697	ENSCGRG00001010960	Hnrnpdl	96	50.476	Cricetulus_griseus_chok1gshd
ENSSSCG00000012473	-	66	69.231	ENSCGRG00000011361	-	99	53.546	Cricetulus_griseus_crigri
ENSSSCG00000012473	-	66	62.105	ENSDARG00000003429	hnrnpdl	96	51.399	Danio_rerio
ENSSSCG00000012473	-	63	68.132	ENSDNOG00000003887	-	74	52.188	Dasypus_novemcinctus
ENSSSCG00000012473	-	91	49.530	ENSDNOG00000018280	-	100	51.274	Dasypus_novemcinctus
ENSSSCG00000012473	-	63	68.132	ENSDNOG00000033765	-	98	57.983	Dasypus_novemcinctus
ENSSSCG00000012473	-	76	51.311	ENSDNOG00000033760	-	93	50.508	Dasypus_novemcinctus
ENSSSCG00000012473	-	71	50.739	ENSDNOG00000034016	-	84	49.099	Dasypus_novemcinctus
ENSSSCG00000012473	-	64	53.476	ENSDNOG00000046422	-	98	53.476	Dasypus_novemcinctus
ENSSSCG00000012473	-	77	54.717	ENSDORG00000000968	-	77	51.976	Dipodomys_ordii
ENSSSCG00000012473	-	67	61.458	ENSDORG00000024157	-	99	52.542	Dipodomys_ordii
ENSSSCG00000012473	-	63	68.132	ENSEASG00005016276	-	77	51.976	Equus_asinus_asinus
ENSSSCG00000012473	-	100	60.286	ENSEASG00005012961	-	100	60.286	Equus_asinus_asinus
ENSSSCG00000012473	-	100	60.405	ENSECAG00000040564	-	100	60.405	Equus_caballus
ENSSSCG00000012473	-	63	68.132	ENSECAG00000022692	HNRNPDL	74	53.974	Equus_caballus
ENSSSCG00000012473	-	77	53.333	ENSEEUG00000004301	-	75	52.188	Erinaceus_europaeus
ENSSSCG00000012473	-	100	46.753	ENSELUG00000003241	hnrnpdl	100	50.000	Esox_lucius
ENSSSCG00000012473	-	76	55.725	ENSFCAG00000000455	HNRNPDL	74	52.500	Felis_catus
ENSSSCG00000012473	-	84	52.218	ENSFALG00000005709	HNRNPDL	96	53.767	Ficedula_albicollis
ENSSSCG00000012473	-	86	61.395	ENSFDAG00000002891	-	77	61.395	Fukomys_damarensis
ENSSSCG00000012473	-	66	70.552	ENSFDAG00000000851	-	100	54.182	Fukomys_damarensis
ENSSSCG00000012473	-	84	52.013	ENSGALG00000023199	HNRNPDL	96	53.767	Gallus_gallus
ENSSSCG00000012473	-	84	52.218	ENSGAGG00000003646	HNRNPDL	96	53.584	Gopherus_agassizii
ENSSSCG00000012473	-	76	55.725	ENSGGOG00000003714	HNRNPDL	74	52.500	Gorilla_gorilla
ENSSSCG00000012473	-	63	68.132	ENSHGLG00000015791	HNRNPDL	77	51.534	Heterocephalus_glaber_female
ENSSSCG00000012473	-	66	68.023	ENSHGLG00000013420	-	88	54.887	Heterocephalus_glaber_female
ENSSSCG00000012473	-	67	64.286	ENSHGLG00000014427	-	91	63.054	Heterocephalus_glaber_female
ENSSSCG00000012473	-	86	42.612	ENSHGLG00100016282	-	99	44.330	Heterocephalus_glaber_male
ENSSSCG00000012473	-	67	65.104	ENSHGLG00100005262	HNRNPDL	96	51.534	Heterocephalus_glaber_male
ENSSSCG00000012473	-	62	63.842	ENSHGLG00100010072	-	95	48.944	Heterocephalus_glaber_male
ENSSSCG00000012473	-	67	56.477	ENSHGLG00100017644	-	99	47.797	Heterocephalus_glaber_male
ENSSSCG00000012473	-	61	61.494	ENSHGLG00100019080	-	89	50.178	Heterocephalus_glaber_male
ENSSSCG00000012473	-	96	51.943	ENSIPUG00000024951	hnrnpdl	96	52.613	Ictalurus_punctatus
ENSSSCG00000012473	-	63	68.132	ENSSTOG00000013979	HNRNPDL	74	52.500	Ictidomys_tridecemlineatus
ENSSSCG00000012473	-	62	67.416	ENSJJAG00000000674	-	78	57.563	Jaculus_jaculus
ENSSSCG00000012473	-	63	68.132	ENSJJAG00000021673	Hnrnpdl	77	52.584	Jaculus_jaculus
ENSSSCG00000012473	-	67	65.854	ENSLACG00000003613	HNRNPDL	98	54.438	Latimeria_chalumnae
ENSSSCG00000012473	-	87	50.167	ENSLOCG00000010736	hnrnpdl	98	51.333	Lepisosteus_oculatus
ENSSSCG00000012473	-	66	70.122	ENSLAFG00000008612	HNRNPDL	92	54.874	Loxodonta_africana
ENSSSCG00000012473	-	74	65.566	ENSLAFG00000031444	-	98	62.069	Loxodonta_africana
ENSSSCG00000012473	-	63	68.132	ENSMFAG00000002275	HNRNPDL	74	52.500	Macaca_fascicularis
ENSSSCG00000012473	-	66	71.963	ENSMMUG00000015777	HNRNPDL	91	64.039	Macaca_mulatta
ENSSSCG00000012473	-	63	68.132	ENSMNEG00000045130	HNRNPDL	74	52.500	Macaca_nemestrina
ENSSSCG00000012473	-	67	65.104	ENSMLEG00000041600	HNRNPDL	99	53.512	Mandrillus_leucophaeus
ENSSSCG00000012473	-	86	48.366	ENSMLEG00000014825	-	99	50.836	Mandrillus_leucophaeus
ENSSSCG00000012473	-	99	51.636	ENSMGAG00000008033	HNRNPDL	100	53.597	Meleagris_gallopavo
ENSSSCG00000012473	-	66	69.697	ENSMAUG00000011132	Hnrnpdl	96	50.794	Mesocricetus_auratus
ENSSSCG00000012473	-	69	63.265	ENSMICG00000037040	-	89	63.265	Microcebus_murinus
ENSSSCG00000012473	-	63	68.132	ENSMICG00000001445	-	74	52.366	Microcebus_murinus
ENSSSCG00000012473	-	63	68.132	ENSMOCG00000015928	Hnrnpdl	78	50.599	Microtus_ochrogaster
ENSSSCG00000012473	-	63	68.132	ENSMODG00000011916	-	75	52.500	Monodelphis_domestica
ENSSSCG00000012473	-	63	67.033	ENSMODG00000006825	-	98	56.118	Monodelphis_domestica
ENSSSCG00000012473	-	77	55.094	ENSMUSG00000029328	Hnrnpdl	97	52.366	Mus_musculus
ENSSSCG00000012473	-	97	52.703	MGP_PahariEiJ_G0031916	-	59	60.699	Mus_pahari
ENSSSCG00000012473	-	67	65.104	MGP_PahariEiJ_G0017226	Hnrnpdl	97	52.366	Mus_pahari
ENSSSCG00000012473	-	67	65.104	MGP_SPRETEiJ_G0028445	Hnrnpdl	97	52.366	Mus_spretus
ENSSSCG00000012473	-	86	57.143	MGP_SPRETEiJ_G0034541	-	55	53.691	Mus_spretus
ENSSSCG00000012473	-	66	70.130	ENSMPUG00000014753	-	99	53.788	Mustela_putorius_furo
ENSSSCG00000012473	-	83	42.160	ENSMPUG00000006259	-	100	42.361	Mustela_putorius_furo
ENSSSCG00000012473	-	81	51.246	ENSMPUG00000009986	-	99	50.456	Mustela_putorius_furo
ENSSSCG00000012473	-	78	46.457	ENSMPUG00000011188	-	99	47.656	Mustela_putorius_furo
ENSSSCG00000012473	-	96	57.192	ENSMLUG00000030192	-	100	59.044	Myotis_lucifugus
ENSSSCG00000012473	-	82	44.689	ENSMLUG00000025989	-	90	45.126	Myotis_lucifugus
ENSSSCG00000012473	-	67	65.104	ENSMLUG00000014452	-	74	52.188	Myotis_lucifugus
ENSSSCG00000012473	-	77	55.094	ENSNGAG00000015740	Hnrnpdl	75	52.997	Nannospalax_galili
ENSSSCG00000012473	-	66	65.789	ENSNLEG00000008636	HNRNPDL	88	64.467	Nomascus_leucogenys
ENSSSCG00000012473	-	67	65.306	ENSMEUG00000011454	-	90	61.086	Notamacropus_eugenii
ENSSSCG00000012473	-	76	48.276	ENSMEUG00000010033	HNRNPDL	93	47.604	Notamacropus_eugenii
ENSSSCG00000012473	-	66	70.552	ENSOPRG00000007178	-	100	55.678	Ochotona_princeps
ENSSSCG00000012473	-	67	58.333	ENSODEG00000004187	-	99	49.498	Octodon_degus
ENSSSCG00000012473	-	63	68.132	ENSODEG00000002106	-	72	53.898	Octodon_degus
ENSSSCG00000012473	-	91	49.216	ENSODEG00000020231	-	88	51.592	Octodon_degus
ENSSSCG00000012473	-	63	68.132	ENSODEG00000003135	-	100	53.041	Octodon_degus
ENSSSCG00000012473	-	94	47.095	ENSODEG00000000376	-	92	48.758	Octodon_degus
ENSSSCG00000012473	-	66	70.370	ENSOANG00000004651	HNRNPDL	100	54.412	Ornithorhynchus_anatinus
ENSSSCG00000012473	-	63	66.484	ENSOCUG00000013805	-	73	52.980	Oryctolagus_cuniculus
ENSSSCG00000012473	-	72	67.788	ENSOCUG00000025252	-	99	66.355	Oryctolagus_cuniculus
ENSSSCG00000012473	-	99	61.379	ENSOGAG00000024995	-	99	64.726	Otolemur_garnettii
ENSSSCG00000012473	-	67	65.306	ENSOGAG00000002501	-	74	52.366	Otolemur_garnettii
ENSSSCG00000012473	-	66	62.105	ENSOGAG00000031703	-	91	59.709	Otolemur_garnettii
ENSSSCG00000012473	-	66	69.697	ENSOARG00000000824	-	87	53.521	Ovis_aries
ENSSSCG00000012473	-	59	68.047	ENSOARG00000011472	-	76	57.604	Ovis_aries
ENSSSCG00000012473	-	66	59.341	ENSOARG00000002402	-	81	52.066	Ovis_aries
ENSSSCG00000012473	-	63	68.132	ENSPPAG00000043177	HNRNPDL	74	52.025	Pan_paniscus
ENSSSCG00000012473	-	63	68.132	ENSPPRG00000013787	HNRNPDL	74	52.500	Panthera_pardus
ENSSSCG00000012473	-	67	65.104	ENSPTIG00000018505	HNRNPDL	99	53.512	Panthera_tigris_altaica
ENSSSCG00000012473	-	63	68.132	ENSPTRG00000016217	HNRNPDL	74	52.025	Pan_troglodytes
ENSSSCG00000012473	-	63	68.132	ENSPANG00000004761	HNRNPDL	74	52.500	Papio_anubis
ENSSSCG00000012473	-	100	49.508	ENSPKIG00000025514	hnrnpdl	100	49.508	Paramormyrops_kingsleyae
ENSSSCG00000012473	-	84	52.218	ENSPSIG00000016746	HNRNPDL	87	53.716	Pelodiscus_sinensis
ENSSSCG00000012473	-	66	69.697	ENSPEMG00000016545	-	92	54.909	Peromyscus_maniculatus_bairdii
ENSSSCG00000012473	-	81	52.297	ENSPCIG00000003089	-	78	51.351	Phascolarctos_cinereus
ENSSSCG00000012473	-	66	57.672	ENSPCIG00000009814	-	84	51.786	Phascolarctos_cinereus
ENSSSCG00000012473	-	63	68.132	ENSPPYG00000014886	HNRNPDL	74	52.500	Pongo_abelii
ENSSSCG00000012473	-	66	70.552	ENSPCAG00000011543	HNRNPDL	65	55.072	Procavia_capensis
ENSSSCG00000012473	-	76	56.107	ENSPCOG00000019831	-	74	52.366	Propithecus_coquereli
ENSSSCG00000012473	-	71	48.583	ENSPVAG00000006816	HNRNPDL	74	45.625	Pteropus_vampyrus
ENSSSCG00000012473	-	66	64.211	ENSPNAG00000016380	hnrnpdl	89	53.962	Pygocentrus_nattereri
ENSSSCG00000012473	-	86	61.135	ENSRNOG00000003377	Rbm31y	56	61.135	Rattus_norvegicus
ENSSSCG00000012473	-	66	69.697	ENSRNOG00000002270	Hnrnpdl	99	49.852	Rattus_norvegicus
ENSSSCG00000012473	-	63	68.132	ENSRBIG00000030310	HNRNPDL	74	52.500	Rhinopithecus_bieti
ENSSSCG00000012473	-	63	68.132	ENSRROG00000034174	HNRNPDL	74	52.500	Rhinopithecus_roxellana
ENSSSCG00000012473	-	55	57.962	ENSSBOG00000022627	-	99	43.643	Saimiri_boliviensis_boliviensis
ENSSSCG00000012473	-	67	57.812	ENSSBOG00000020566	-	99	48.829	Saimiri_boliviensis_boliviensis
ENSSSCG00000012473	-	71	42.917	ENSSBOG00000028904	-	99	43.210	Saimiri_boliviensis_boliviensis
ENSSSCG00000012473	-	63	68.132	ENSSHAG00000013616	-	83	52.500	Sarcophilus_harrisii
ENSSSCG00000012473	-	96	51.748	ENSSFOG00015005893	hnrnpdl	96	52.414	Scleropages_formosus
ENSSSCG00000012473	-	66	64.286	ENSSARG00000009961	-	100	49.600	Sorex_araneus
ENSSSCG00000012473	-	84	51.678	ENSSPUG00000013700	HNRNPDL	96	54.082	Sphenodon_punctatus
ENSSSCG00000012473	-	66	71.166	ENSTGUG00000002850	HNRNPDL	100	54.579	Taeniopygia_guttata
ENSSSCG00000012473	-	76	55.725	ENSTBEG00000002817	-	75	53.488	Tupaia_belangeri
ENSSSCG00000012473	-	63	68.132	ENSTTRG00000001793	-	74	52.174	Tursiops_truncatus
ENSSSCG00000012473	-	63	68.132	ENSUAMG00000011358	HNRNPDL	77	51.976	Ursus_americanus
ENSSSCG00000012473	-	67	65.104	ENSUMAG00000008681	HNRNPDL	78	51.976	Ursus_maritimus
ENSSSCG00000012473	-	64	42.478	ENSVPAG00000002422	-	92	43.874	Vicugna_pacos
ENSSSCG00000012473	-	63	67.033	ENSVVUG00000024653	HNRNPDL	77	51.368	Vulpes_vulpes
ENSSSCG00000012473	-	63	65.385	ENSVVUG00000013596	-	99	52.349	Vulpes_vulpes
ENSSSCG00000012473	-	76	53.374	ENSVVUG00000001421	-	94	49.724	Vulpes_vulpes
ENSSSCG00000012473	-	100	47.368	ENSXETG00000023026	hnrnpdl	100	50.000	Xenopus_tropicalis