EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000012503 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 1010 bases
Position: chrX:75744433-75745442
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000057440	RRM_1	PF00076.22	6.3e-25	1	2
ENSSSCP00000057440	RRM_1	PF00076.22	6.3e-25	2	2
ENSSSCP00000057440	HnRNPA1	PF11627.8	4.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000032872	-	969	-	ENSSSCP00000057440	322 (aa)	-	A0A287BLE9

Gene Model

Click here to download ENSSSCG00000012503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012503's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000012503	-	57	67.677	ENSSSCG00000033635	-	54	67.358
ENSSSCG00000012503	-	59	43.814	ENSSSCG00000033138	-	54	43.889
ENSSSCG00000012503	-	58	32.663	ENSSSCG00000012473	-	61	32.402
ENSSSCG00000012503	-	57	31.606	ENSSSCG00000001932	-	64	34.146
ENSSSCG00000012503	-	57	67.172	ENSSSCG00000040926	-	54	66.839
ENSSSCG00000012503	-	71	43.723	ENSSSCG00000001098	-	92	39.489
ENSSSCG00000012503	-	51	34.615	ENSSSCG00000022528	DAZAP1	51	33.854
ENSSSCG00000012503	-	73	38.000	ENSSSCG00000036878	-	78	35.922
ENSSSCG00000012503	-	54	40.580	ENSSSCG00000029365	MSI1	53	40.659
ENSSSCG00000012503	-	53	36.095	ENSSSCG00000014031	-	61	36.066
ENSSSCG00000012503	-	52	62.500	ENSSSCG00000015988	HNRNPA3	66	71.429
ENSSSCG00000012503	-	53	36.757	ENSSSCG00000038505	MSI2	59	37.569
ENSSSCG00000012503	-	54	70.681	ENSSSCG00000013607	-	55	70.681
ENSSSCG00000012503	-	91	79.897	ENSSSCG00000036350	HNRNPA2B1	94	73.668

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012503	-	51	80.899	ENSG00000122566	HNRNPA2B1	94	73.668	Homo_sapiens
ENSSSCG00000012503	-	56	79.487	ENSANAG00000033016	HNRNPA2B1	94	73.668	Aotus_nancymaae
ENSSSCG00000012503	-	57	80.500	ENSANAG00000020524	-	93	73.418	Aotus_nancymaae
ENSSSCG00000012503	-	55	68.000	ENSBTAG00000054873	-	79	68.000	Bos_taurus
ENSSSCG00000012503	-	93	54.180	ENSBTAG00000038680	-	51	64.398	Bos_taurus
ENSSSCG00000012503	-	93	50.464	ENSBTAG00000011195	-	51	64.211	Bos_taurus
ENSSSCG00000012503	-	55	79.897	ENSBTAG00000005726	HNRNPA2B1	94	73.668	Bos_taurus
ENSSSCG00000012503	-	53	76.471	ENSBTAG00000051697	-	56	76.471	Bos_taurus
ENSSSCG00000012503	-	92	79.487	ENSCJAG00000007908	HNRNPA2B1	94	73.668	Callithrix_jacchus
ENSSSCG00000012503	-	53	70.060	ENSCJAG00000047538	-	59	70.060	Callithrix_jacchus
ENSSSCG00000012503	-	93	50.311	ENSCHIG00000015804	-	54	64.550	Capra_hircus
ENSSSCG00000012503	-	57	65.152	ENSCHIG00000015823	-	57	66.321	Capra_hircus
ENSSSCG00000012503	-	61	67.773	ENSCHIG00000008431	-	75	68.586	Capra_hircus
ENSSSCG00000012503	-	54	64.211	ENSCHIG00000026095	-	57	64.211	Capra_hircus
ENSSSCG00000012503	-	55	54.082	ENSCHIG00000011148	-	56	54.082	Capra_hircus
ENSSSCG00000012503	-	55	79.897	ENSCHIG00000022444	HNRNPA2B1	94	73.668	Capra_hircus
ENSSSCG00000012503	-	61	88.462	ENSTSYG00000008124	HNRNPA2B1	94	73.668	Carlito_syrichta
ENSSSCG00000012503	-	58	78.218	ENSCCAG00000029074	HNRNPA2B1	94	73.668	Cebus_capucinus
ENSSSCG00000012503	-	56	79.487	ENSCATG00000033325	HNRNPA2B1	94	73.668	Cercocebus_atys
ENSSSCG00000012503	-	56	80.513	ENSCLAG00000014058	HNRNPA2B1	94	73.668	Chinchilla_lanigera
ENSSSCG00000012503	-	56	78.974	ENSCSAG00000005140	-	66	78.974	Chlorocebus_sabaeus
ENSSSCG00000012503	-	55	80.311	ENSCPBG00000022485	HNRNPA2B1	91	73.502	Chrysemys_picta_bellii
ENSSSCG00000012503	-	63	88.462	ENSCANG00000028734	HNRNPA2B1	94	73.668	Colobus_angolensis_palliatus
ENSSSCG00000012503	-	56	80.513	ENSCGRG00001022416	-	94	73.668	Cricetulus_griseus_chok1gshd
ENSSSCG00000012503	-	55	80.311	ENSCGRG00000015964	-	90	73.270	Cricetulus_griseus_crigri
ENSSSCG00000012503	-	55	79.897	ENSDNOG00000012928	-	90	72.727	Dasypus_novemcinctus
ENSSSCG00000012503	-	56	80.513	ENSDORG00000005482	Hnrnpa2b1	94	73.668	Dipodomys_ordii
ENSSSCG00000012503	-	55	79.897	ENSETEG00000018577	HNRNPA2B1	79	71.326	Echinops_telfairi
ENSSSCG00000012503	-	55	79.897	ENSEASG00005022108	HNRNPA2B1	50	71.160	Equus_asinus_asinus
ENSSSCG00000012503	-	55	79.897	ENSECAG00000000782	HNRNPA2B1	50	71.160	Equus_caballus
ENSSSCG00000012503	-	63	88.462	ENSEEUG00000014880	HNRNPA2B1	91	61.006	Erinaceus_europaeus
ENSSSCG00000012503	-	51	80.899	ENSFCAG00000027765	HNRNPA2B1	94	73.668	Felis_catus
ENSSSCG00000012503	-	77	40.299	ENSFCAG00000036293	-	69	51.872	Felis_catus
ENSSSCG00000012503	-	56	80.513	ENSFDAG00000000793	HNRNPA2B1	94	73.668	Fukomys_damarensis
ENSSSCG00000012503	-	55	79.275	ENSGALG00000011036	HNRNPA2B1	92	72.555	Gallus_gallus
ENSSSCG00000012503	-	55	80.311	ENSGAGG00000006799	HNRNPA2B1	91	73.502	Gopherus_agassizii
ENSSSCG00000012503	-	92	65.595	ENSGGOG00000017072	HNRNPA2B1	94	73.668	Gorilla_gorilla
ENSSSCG00000012503	-	56	80.513	ENSHGLG00000015396	HNRNPA2B1	94	73.668	Heterocephalus_glaber_female
ENSSSCG00000012503	-	54	60.209	ENSHGLG00000010704	-	91	57.994	Heterocephalus_glaber_female
ENSSSCG00000012503	-	54	60.209	ENSHGLG00100009903	-	91	57.994	Heterocephalus_glaber_male
ENSSSCG00000012503	-	50	72.881	ENSSTOG00000029449	-	70	72.881	Ictidomys_tridecemlineatus
ENSSSCG00000012503	-	55	64.249	ENSSTOG00000025552	-	75	73.171	Ictidomys_tridecemlineatus
ENSSSCG00000012503	-	50	73.248	ENSSTOG00000034171	-	74	73.248	Ictidomys_tridecemlineatus
ENSSSCG00000012503	-	57	67.021	ENSSTOG00000024155	-	69	74.839	Ictidomys_tridecemlineatus
ENSSSCG00000012503	-	56	80.513	ENSSTOG00000006202	-	94	73.354	Ictidomys_tridecemlineatus
ENSSSCG00000012503	-	50	67.416	ENSJJAG00000013880	-	71	67.416	Jaculus_jaculus
ENSSSCG00000012503	-	56	73.333	ENSJJAG00000012306	-	63	73.333	Jaculus_jaculus
ENSSSCG00000012503	-	55	70.466	ENSJJAG00000023126	-	63	70.466	Jaculus_jaculus
ENSSSCG00000012503	-	89	66.330	ENSJJAG00000022256	-	64	78.075	Jaculus_jaculus
ENSSSCG00000012503	-	55	80.311	ENSJJAG00000000423	-	86	73.270	Jaculus_jaculus
ENSSSCG00000012503	-	61	86.667	ENSLAFG00000006902	HNRNPA2B1	86	81.818	Loxodonta_africana
ENSSSCG00000012503	-	63	88.462	ENSMFAG00000002536	HNRNPA2B1	94	73.668	Macaca_fascicularis
ENSSSCG00000012503	-	61	88.462	ENSMMUG00000003619	HNRNPA2B1	94	73.668	Macaca_mulatta
ENSSSCG00000012503	-	64	88.462	ENSMNEG00000029148	HNRNPA2B1	94	73.668	Macaca_nemestrina
ENSSSCG00000012503	-	61	88.462	ENSMLEG00000040848	HNRNPA2B1	94	73.668	Mandrillus_leucophaeus
ENSSSCG00000012503	-	56	80.513	ENSMAUG00000005706	-	94	73.668	Mesocricetus_auratus
ENSSSCG00000012503	-	56	76.650	ENSMAUG00000015003	-	62	76.562	Mesocricetus_auratus
ENSSSCG00000012503	-	50	71.271	ENSMICG00000002750	-	90	62.733	Microcebus_murinus
ENSSSCG00000012503	-	63	88.462	ENSMICG00000030570	HNRNPA2B1	94	73.668	Microcebus_murinus
ENSSSCG00000012503	-	56	80.513	ENSMOCG00000009258	-	94	73.668	Microtus_ochrogaster
ENSSSCG00000012503	-	64	84.694	MGP_CAROLIEiJ_G0028377	Hnrnpa2b1	92	84.694	Mus_caroli
ENSSSCG00000012503	-	64	84.694	ENSMUSG00000004980	Hnrnpa2b1	92	84.694	Mus_musculus
ENSSSCG00000012503	-	64	84.694	MGP_PahariEiJ_G0022127	Hnrnpa2b1	92	84.694	Mus_pahari
ENSSSCG00000012503	-	64	84.694	MGP_SPRETEiJ_G0029379	Hnrnpa2b1	92	84.694	Mus_spretus
ENSSSCG00000012503	-	56	80.513	ENSMPUG00000017012	-	65	80.513	Mustela_putorius_furo
ENSSSCG00000012503	-	53	80.749	ENSMLUG00000028687	-	53	79.487	Myotis_lucifugus
ENSSSCG00000012503	-	57	55.376	ENSNGAG00000000224	-	69	56.667	Nannospalax_galili
ENSSSCG00000012503	-	52	57.778	ENSNGAG00000017267	-	70	57.778	Nannospalax_galili
ENSSSCG00000012503	-	56	80.513	ENSNGAG00000015156	-	94	73.668	Nannospalax_galili
ENSSSCG00000012503	-	58	77.833	ENSNLEG00000014918	HNRNPA2B1	94	73.668	Nomascus_leucogenys
ENSSSCG00000012503	-	56	79.487	ENSMEUG00000014479	-	67	79.487	Notamacropus_eugenii
ENSSSCG00000012503	-	55	53.125	ENSODEG00000009329	-	92	53.797	Octodon_degus
ENSSSCG00000012503	-	61	79.621	ENSODEG00000018537	-	57	79.487	Octodon_degus
ENSSSCG00000012503	-	56	80.513	ENSODEG00000008757	-	93	71.473	Octodon_degus
ENSSSCG00000012503	-	90	53.135	ENSODEG00000005464	-	56	59.686	Octodon_degus
ENSSSCG00000012503	-	53	66.667	ENSOARG00000004416	-	88	52.698	Ovis_aries
ENSSSCG00000012503	-	51	67.978	ENSOARG00000001157	-	90	55.031	Ovis_aries
ENSSSCG00000012503	-	60	66.986	ENSOARG00000008025	-	70	68.063	Ovis_aries
ENSSSCG00000012503	-	54	63.874	ENSOARG00000016439	-	58	63.874	Ovis_aries
ENSSSCG00000012503	-	54	63.351	ENSOARG00000003965	-	56	63.351	Ovis_aries
ENSSSCG00000012503	-	61	51.152	ENSOARG00000013811	-	81	51.295	Ovis_aries
ENSSSCG00000012503	-	56	79.487	ENSPPAG00000037520	HNRNPA2B1	94	73.668	Pan_paniscus
ENSSSCG00000012503	-	51	80.899	ENSPPRG00000019212	HNRNPA2B1	94	73.668	Panthera_pardus
ENSSSCG00000012503	-	58	60.099	ENSPTIG00000006805	-	66	58.289	Panthera_tigris_altaica
ENSSSCG00000012503	-	51	80.899	ENSPTIG00000019833	HNRNPA2B1	94	73.668	Panthera_tigris_altaica
ENSSSCG00000012503	-	56	79.487	ENSPTRG00000019002	HNRNPA2B1	94	73.668	Pan_troglodytes
ENSSSCG00000012503	-	63	88.462	ENSPANG00000021598	HNRNPA2B1	94	73.668	Papio_anubis
ENSSSCG00000012503	-	55	80.311	ENSPSIG00000002659	HNRNPA2B1	57	80.311	Pelodiscus_sinensis
ENSSSCG00000012503	-	56	80.513	ENSPEMG00000014384	Hnrnpa2b1	94	73.668	Peromyscus_maniculatus_bairdii
ENSSSCG00000012503	-	52	59.239	ENSPMAG00000008270	HNRNPA2B1	77	58.639	Petromyzon_marinus
ENSSSCG00000012503	-	60	88.462	ENSPCIG00000013729	HNRNPA2B1	77	86.364	Phascolarctos_cinereus
ENSSSCG00000012503	-	64	69.369	ENSPCOG00000026324	HNRNPA2B1	89	69.369	Propithecus_coquereli
ENSSSCG00000012503	-	56	79.487	ENSRNOG00000011175	Hnrnpa2b1	90	73.270	Rattus_norvegicus
ENSSSCG00000012503	-	56	65.128	ENSRBIG00000039719	-	92	56.825	Rhinopithecus_bieti
ENSSSCG00000012503	-	63	89.286	ENSRBIG00000015923	-	81	87.500	Rhinopithecus_bieti
ENSSSCG00000012503	-	52	80.328	ENSRROG00000020443	-	94	73.668	Rhinopithecus_roxellana
ENSSSCG00000012503	-	92	63.666	ENSSBOG00000005245	HNRNPA2B1	94	73.668	Saimiri_boliviensis_boliviensis
ENSSSCG00000012503	-	55	79.275	ENSSPUG00000015955	HNRNPA2B1	91	72.871	Sphenodon_punctatus
ENSSSCG00000012503	-	91	60.185	ENSTGUG00000002869	HNRNPA2B1	56	78.756	Taeniopygia_guttata
ENSSSCG00000012503	-	50	72.989	ENSTBEG00000003219	-	79	57.613	Tupaia_belangeri
ENSSSCG00000012503	-	56	80.513	ENSUAMG00000025628	HNRNPA2B1	94	73.668	Ursus_americanus
ENSSSCG00000012503	-	55	79.897	ENSUMAG00000001699	HNRNPA2B1	90	73.270	Ursus_maritimus
ENSSSCG00000012503	-	57	77.000	ENSXETG00000012170	hnrnpa2b1	59	76.410	Xenopus_tropicalis