EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000012556 (Gene tree)
Gene ID: 100516772
Gene Symbol: RBM41
Alias: FLJ11016
Full Name: RNA binding motif protein 41
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 62537 bases
Position: chrX:87512550-87575086
Accession: 100516772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000039216	RRM_1	PF00076.22	2.5e-10	1	1
ENSSSCP00000013350	RRM_1	PF00076.22	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000013728	RBM41-202	6244	XM_003135295	ENSSSCP00000013350	412 (aa)	XP_003135343	F1RXK8
ENSSSCT00000036760	RBM41-201	6645	XM_013983724	ENSSSCP00000039216	436 (aa)	XP_013839178	A0A287A5S5
ENSSSCT00000046582	RBM41-203	3421	-	ENSSSCP00000050678	205 (aa)	-	A0A287B3I0

Gene Model

Click here to download ENSSSCG00000012556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012556	RBM41	100	96.126	ENSG00000089682	RBM41	100	96.126	Homo_sapiens
ENSSSCG00000012556	RBM41	99	96.837	ENSAMEG00000010490	RBM41	99	96.837	Ailuropoda_melanoleuca
ENSSSCG00000012556	RBM41	90	42.243	ENSACIG00000014038	rbm41	93	42.243	Amphilophus_citrinellus
ENSSSCG00000012556	RBM41	91	44.591	ENSAOCG00000020927	rbm41	96	43.622	Amphiprion_ocellaris
ENSSSCG00000012556	RBM41	91	44.063	ENSAPEG00000001223	rbm41	96	43.112	Amphiprion_percula
ENSSSCG00000012556	RBM41	94	41.709	ENSATEG00000022968	rbm41	99	40.639	Anabas_testudineus
ENSSSCG00000012556	RBM41	87	43.152	ENSACAG00000014146	RBM41	80	44.211	Anolis_carolinensis
ENSSSCG00000012556	RBM41	100	95.881	ENSANAG00000037624	RBM41	100	95.881	Aotus_nancymaae
ENSSSCG00000012556	RBM41	94	40.741	ENSACLG00000024125	rbm41	97	40.503	Astatotilapia_calliptera
ENSSSCG00000012556	RBM41	94	41.299	ENSAMXG00000007109	rbm41	95	39.953	Astyanax_mexicanus
ENSSSCG00000012556	RBM41	100	97.941	ENSBTAG00000000955	RBM41	100	97.941	Bos_taurus
ENSSSCG00000012556	RBM41	100	94.279	ENSCJAG00000007957	RBM41	100	94.279	Callithrix_jacchus
ENSSSCG00000012556	RBM41	99	96.594	ENSCAFG00000017959	RBM41	99	96.594	Canis_familiaris
ENSSSCG00000012556	RBM41	99	96.560	ENSCAFG00020006764	RBM41	98	96.560	Canis_lupus_dingo
ENSSSCG00000012556	RBM41	100	97.094	ENSCHIG00000015945	RBM41	100	97.094	Capra_hircus
ENSSSCG00000012556	RBM41	100	94.915	ENSTSYG00000006980	RBM41	100	94.915	Carlito_syrichta
ENSSSCG00000012556	RBM41	100	89.931	ENSCPOG00000025052	RBM41	100	89.931	Cavia_porcellus
ENSSSCG00000012556	RBM41	100	95.884	ENSCCAG00000028014	RBM41	100	95.884	Cebus_capucinus
ENSSSCG00000012556	RBM41	100	95.400	ENSCATG00000020042	RBM41	100	95.400	Cercocebus_atys
ENSSSCG00000012556	RBM41	99	92.343	ENSCLAG00000002330	RBM41	99	92.343	Chinchilla_lanigera
ENSSSCG00000012556	RBM41	98	96.019	ENSCSAG00000009146	RBM41	93	96.019	Chlorocebus_sabaeus
ENSSSCG00000012556	RBM41	95	63.104	ENSCPBG00000001728	RBM41	99	61.314	Chrysemys_picta_bellii
ENSSSCG00000012556	RBM41	98	95.533	ENSCANG00000028836	RBM41	99	95.533	Colobus_angolensis_palliatus
ENSSSCG00000012556	RBM41	100	89.931	ENSCGRG00001012295	Rbm41	100	89.931	Cricetulus_griseus_chok1gshd
ENSSSCG00000012556	RBM41	100	89.016	ENSCGRG00000010545	Rbm41	100	89.016	Cricetulus_griseus_crigri
ENSSSCG00000012556	RBM41	94	40.811	ENSCSEG00000010491	rbm41	97	40.811	Cynoglossus_semilaevis
ENSSSCG00000012556	RBM41	96	42.453	ENSDARG00000054096	rbm41	99	42.453	Danio_rerio
ENSSSCG00000012556	RBM41	99	93.917	ENSDNOG00000013865	RBM41	99	93.917	Dasypus_novemcinctus
ENSSSCG00000012556	RBM41	99	88.167	ENSDORG00000008077	Rbm41	99	88.167	Dipodomys_ordii
ENSSSCG00000012556	RBM41	67	97.561	ENSETEG00000019681	-	68	97.561	Echinops_telfairi
ENSSSCG00000012556	RBM41	100	96.610	ENSECAG00000021846	RBM41	100	96.610	Equus_caballus
ENSSSCG00000012556	RBM41	99	89.756	ENSEEUG00000006722	RBM41	100	89.756	Erinaceus_europaeus
ENSSSCG00000012556	RBM41	96	39.013	ENSELUG00000007426	rbm41	93	39.013	Esox_lucius
ENSSSCG00000012556	RBM41	99	96.098	ENSFCAG00000001982	RBM41	85	96.098	Felis_catus
ENSSSCG00000012556	RBM41	94	60.256	ENSFALG00000011221	RBM41	91	60.256	Ficedula_albicollis
ENSSSCG00000012556	RBM41	100	93.578	ENSFDAG00000020264	RBM41	100	93.578	Fukomys_damarensis
ENSSSCG00000012556	RBM41	84	41.737	ENSFHEG00000006026	rbm41	91	41.737	Fundulus_heteroclitus
ENSSSCG00000012556	RBM41	95	40.250	ENSGMOG00000005876	rbm41	99	40.250	Gadus_morhua
ENSSSCG00000012556	RBM41	94	57.326	ENSGALG00000004832	RBM41	97	56.140	Gallus_gallus
ENSSSCG00000012556	RBM41	95	39.379	ENSGAFG00000011066	rbm41	92	41.063	Gambusia_affinis
ENSSSCG00000012556	RBM41	94	41.476	ENSGACG00000020842	rbm41	95	41.476	Gasterosteus_aculeatus
ENSSSCG00000012556	RBM41	95	60.560	ENSGAGG00000015064	RBM41	96	59.850	Gopherus_agassizii
ENSSSCG00000012556	RBM41	100	96.126	ENSGGOG00000006587	RBM41	100	96.126	Gorilla_gorilla
ENSSSCG00000012556	RBM41	94	40.553	ENSHBUG00000014307	rbm41	97	40.961	Haplochromis_burtoni
ENSSSCG00000012556	RBM41	99	93.088	ENSHGLG00000003803	RBM41	95	93.088	Heterocephalus_glaber_female
ENSSSCG00000012556	RBM41	99	93.088	ENSHGLG00100007396	RBM41	98	93.766	Heterocephalus_glaber_male
ENSSSCG00000012556	RBM41	94	34.577	ENSHCOG00000009614	rbm41	96	34.577	Hippocampus_comes
ENSSSCG00000012556	RBM41	99	38.724	ENSIPUG00000007379	rbm41	91	38.851	Ictalurus_punctatus
ENSSSCG00000012556	RBM41	97	95.487	ENSSTOG00000001604	RBM41	100	94.508	Ictidomys_tridecemlineatus
ENSSSCG00000012556	RBM41	100	91.743	ENSJJAG00000010415	Rbm41	100	91.743	Jaculus_jaculus
ENSSSCG00000012556	RBM41	93	41.487	ENSKMAG00000013436	rbm41	99	40.995	Kryptolebias_marmoratus
ENSSSCG00000012556	RBM41	94	51.408	ENSLACG00000012336	RBM41	99	51.300	Latimeria_chalumnae
ENSSSCG00000012556	RBM41	91	36.800	ENSLOCG00000014958	rbm41	94	36.010	Lepisosteus_oculatus
ENSSSCG00000012556	RBM41	99	94.943	ENSLAFG00000028266	RBM41	99	94.943	Loxodonta_africana
ENSSSCG00000012556	RBM41	98	95.782	ENSMFAG00000041338	RBM41	99	95.782	Macaca_fascicularis
ENSSSCG00000012556	RBM41	98	96.019	ENSMMUG00000023172	RBM41	98	95.297	Macaca_mulatta
ENSSSCG00000012556	RBM41	100	95.157	ENSMNEG00000009942	RBM41	100	95.157	Macaca_nemestrina
ENSSSCG00000012556	RBM41	98	95.037	ENSMLEG00000030890	RBM41	99	95.037	Mandrillus_leucophaeus
ENSSSCG00000012556	RBM41	95	41.324	ENSMAMG00000000581	rbm41	97	41.324	Mastacembelus_armatus
ENSSSCG00000012556	RBM41	92	40.995	ENSMZEG00005011676	rbm41	95	40.749	Maylandia_zebra
ENSSSCG00000012556	RBM41	68	55.872	ENSMGAG00000009663	RBM41	99	53.135	Meleagris_gallopavo
ENSSSCG00000012556	RBM41	100	91.076	ENSMAUG00000016409	Rbm41	100	91.076	Mesocricetus_auratus
ENSSSCG00000012556	RBM41	100	94.508	ENSMICG00000009750	RBM41	100	94.508	Microcebus_murinus
ENSSSCG00000012556	RBM41	100	91.076	ENSMOCG00000008323	Rbm41	100	91.076	Microtus_ochrogaster
ENSSSCG00000012556	RBM41	94	44.304	ENSMMOG00000014574	rbm41	99	44.304	Mola_mola
ENSSSCG00000012556	RBM41	100	67.229	ENSMODG00000002312	RBM41	100	67.229	Monodelphis_domestica
ENSSSCG00000012556	RBM41	93	43.091	ENSMALG00000010729	rbm41	97	42.191	Monopterus_albus
ENSSSCG00000012556	RBM41	99	91.877	MGP_CAROLIEiJ_G0033447	Rbm41	99	91.877	Mus_caroli
ENSSSCG00000012556	RBM41	100	87.872	ENSMUSG00000031433	Rbm41	100	87.872	Mus_musculus
ENSSSCG00000012556	RBM41	100	89.474	MGP_PahariEiJ_G0031986	Rbm41	100	89.474	Mus_pahari
ENSSSCG00000012556	RBM41	100	88.101	MGP_SPRETEiJ_G0034617	Rbm41	100	88.101	Mus_spretus
ENSSSCG00000012556	RBM41	99	96.837	ENSMPUG00000003751	RBM41	85	96.837	Mustela_putorius_furo
ENSSSCG00000012556	RBM41	99	93.431	ENSMLUG00000005943	RBM41	99	93.431	Myotis_lucifugus
ENSSSCG00000012556	RBM41	100	91.304	ENSNGAG00000014004	Rbm41	100	91.304	Nannospalax_galili
ENSSSCG00000012556	RBM41	91	43.257	ENSNBRG00000014480	rbm41	94	42.714	Neolamprologus_brichardi
ENSSSCG00000012556	RBM41	100	95.642	ENSNLEG00000013861	RBM41	100	95.642	Nomascus_leucogenys
ENSSSCG00000012556	RBM41	99	67.718	ENSMEUG00000002663	RBM41	100	67.718	Notamacropus_eugenii
ENSSSCG00000012556	RBM41	100	91.762	ENSODEG00000010074	RBM41	100	91.762	Octodon_degus
ENSSSCG00000012556	RBM41	95	44.554	ENSONIG00000013260	rbm41	100	44.554	Oreochromis_niloticus
ENSSSCG00000012556	RBM41	99	91.264	ENSOCUG00000015937	RBM41	99	91.264	Oryctolagus_cuniculus
ENSSSCG00000012556	RBM41	95	41.232	ENSORLG00000015367	rbm41	98	41.232	Oryzias_latipes
ENSSSCG00000012556	RBM41	95	39.348	ENSORLG00020008056	rbm41	98	39.348	Oryzias_latipes_hni
ENSSSCG00000012556	RBM41	95	40.909	ENSORLG00015014350	rbm41	98	40.909	Oryzias_latipes_hsok
ENSSSCG00000012556	RBM41	94	39.813	ENSOMEG00000023816	rbm41	98	40.288	Oryzias_melastigma
ENSSSCG00000012556	RBM41	99	91.727	ENSOGAG00000009280	RBM41	99	91.727	Otolemur_garnettii
ENSSSCG00000012556	RBM41	99	97.567	ENSOARG00000018817	RBM41	94	97.567	Ovis_aries
ENSSSCG00000012556	RBM41	100	96.126	ENSPPAG00000000213	RBM41	100	96.126	Pan_paniscus
ENSSSCG00000012556	RBM41	100	96.368	ENSPPRG00000021500	RBM41	100	96.368	Panthera_pardus
ENSSSCG00000012556	RBM41	98	96.526	ENSPTRG00000022158	RBM41	99	96.526	Pan_troglodytes
ENSSSCG00000012556	RBM41	100	95.157	ENSPANG00000012935	RBM41	100	95.157	Papio_anubis
ENSSSCG00000012556	RBM41	95	42.986	ENSPKIG00000008793	rbm41	99	42.986	Paramormyrops_kingsleyae
ENSSSCG00000012556	RBM41	58	57.261	ENSPSIG00000003931	RBM41	94	56.225	Pelodiscus_sinensis
ENSSSCG00000012556	RBM41	99	90.596	ENSPEMG00000015991	Rbm41	99	90.596	Peromyscus_maniculatus_bairdii
ENSSSCG00000012556	RBM41	96	69.949	ENSPCIG00000007079	RBM41	100	69.949	Phascolarctos_cinereus
ENSSSCG00000012556	RBM41	95	39.709	ENSPFOG00000000848	rbm41	93	39.857	Poecilia_formosa
ENSSSCG00000012556	RBM41	84	38.544	ENSPLAG00000022761	rbm41	87	38.992	Poecilia_latipinna
ENSSSCG00000012556	RBM41	94	40.000	ENSPMEG00000002394	rbm41	93	39.618	Poecilia_mexicana
ENSSSCG00000012556	RBM41	91	40.750	ENSPREG00000013759	rbm41	90	40.347	Poecilia_reticulata
ENSSSCG00000012556	RBM41	100	95.884	ENSPPYG00000020609	RBM41	100	95.884	Pongo_abelii
ENSSSCG00000012556	RBM41	100	92.736	ENSPCAG00000003991	RBM41	100	92.736	Procavia_capensis
ENSSSCG00000012556	RBM41	100	95.884	ENSPCOG00000014296	RBM41	100	95.884	Propithecus_coquereli
ENSSSCG00000012556	RBM41	68	95.918	ENSPVAG00000001786	-	68	95.918	Pteropus_vampyrus
ENSSSCG00000012556	RBM41	91	43.717	ENSPNYG00000012687	rbm41	95	42.857	Pundamilia_nyererei
ENSSSCG00000012556	RBM41	95	41.705	ENSPNAG00000003395	rbm41	96	41.705	Pygocentrus_nattereri
ENSSSCG00000012556	RBM41	100	88.136	ENSRNOG00000057622	Rbm41	100	88.136	Rattus_norvegicus
ENSSSCG00000012556	RBM41	99	95.388	ENSRBIG00000030599	RBM41	99	95.782	Rhinopithecus_bieti
ENSSSCG00000012556	RBM41	99	95.388	ENSRROG00000009201	RBM41	99	95.782	Rhinopithecus_roxellana
ENSSSCG00000012556	RBM41	100	95.884	ENSSBOG00000030042	RBM41	100	95.884	Saimiri_boliviensis_boliviensis
ENSSSCG00000012556	RBM41	99	69.734	ENSSHAG00000002285	RBM41	100	69.734	Sarcophilus_harrisii
ENSSSCG00000012556	RBM41	95	41.403	ENSSFOG00015009956	rbm41	95	41.629	Scleropages_formosus
ENSSSCG00000012556	RBM41	94	41.745	ENSSMAG00000014485	rbm41	98	41.589	Scophthalmus_maximus
ENSSSCG00000012556	RBM41	95	42.056	ENSSDUG00000008808	rbm41	97	42.056	Seriola_dumerili
ENSSSCG00000012556	RBM41	93	42.317	ENSSLDG00000002232	rbm41	97	41.822	Seriola_lalandi_dorsalis
ENSSSCG00000012556	RBM41	100	91.262	ENSSARG00000004377	RBM41	100	91.262	Sorex_araneus
ENSSSCG00000012556	RBM41	94	58.869	ENSSPUG00000018486	RBM41	96	58.869	Sphenodon_punctatus
ENSSSCG00000012556	RBM41	94	42.654	ENSSPAG00000018885	rbm41	97	42.155	Stegastes_partitus
ENSSSCG00000012556	RBM41	68	58.304	ENSTGUG00000006473	-	97	56.419	Taeniopygia_guttata
ENSSSCG00000012556	RBM41	95	40.952	ENSTRUG00000009805	rbm41	98	40.952	Takifugu_rubripes
ENSSSCG00000012556	RBM41	96	43.317	ENSTNIG00000004692	rbm41	96	43.317	Tetraodon_nigroviridis
ENSSSCG00000012556	RBM41	99	97.680	ENSUAMG00000021897	RBM41	98	97.680	Ursus_americanus
ENSSSCG00000012556	RBM41	100	97.579	ENSVPAG00000003647	RBM41	100	97.579	Vicugna_pacos
ENSSSCG00000012556	RBM41	99	96.837	ENSVVUG00000009707	RBM41	85	96.837	Vulpes_vulpes
ENSSSCG00000012556	RBM41	91	40.247	ENSXCOG00000018744	rbm41	91	39.853	Xiphophorus_couchianus
ENSSSCG00000012556	RBM41	94	39.952	ENSXMAG00000015338	rbm41	94	39.573	Xiphophorus_maculatus