EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000012570 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 1642 bases
Position: chr4:89910607-89912248
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000041041	GTP_EFTU	PF00009.27	5.5e-30	1	1
ENSSSCP00000013367	GTP_EFTU_D3	PF03143.17	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000049263	-	297	-	ENSSSCP00000034759	98 (aa)	-	A0A286ZTH1
ENSSSCT00000051600	-	621	-	ENSSSCP00000041041	206 (aa)	-	A0A287AB82
ENSSSCT00000013745	-	180	-	ENSSSCP00000013367	59 (aa)	-	F1RXI4

Gene Model

Click here to download ENSSSCG00000012570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000012570	-	97	68.421	ENSSSCG00000034113	-	53	59.671
ENSSSCG00000012570	-	97	78.947	ENSSSCG00000040401	EEF1A2	52	62.500
ENSSSCG00000012570	-	80	74.468	ENSSSCG00000038035	-	53	58.333
ENSSSCG00000012570	-	100	72.881	ENSSSCG00000031239	-	50	47.881
ENSSSCG00000012570	-	100	86.441	ENSSSCG00000004489	-	56	67.083

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012570	-	94	68.750	ENSAMEG00000010492	-	52	68.750	Ailuropoda_melanoleuca
ENSSSCG00000012570	-	93	70.909	ENSAMEG00000004149	-	50	53.419	Ailuropoda_melanoleuca
ENSSSCG00000012570	-	98	75.862	ENSAMEG00000008678	-	52	58.650	Ailuropoda_melanoleuca
ENSSSCG00000012570	-	100	71.186	ENSAMEG00000006578	-	52	58.051	Ailuropoda_melanoleuca
ENSSSCG00000012570	-	100	84.746	ENSANAG00000037868	-	52	64.957	Aotus_nancymaae
ENSSSCG00000012570	-	95	66.812	ENSCJAG00000003968	-	54	66.812	Callithrix_jacchus
ENSSSCG00000012570	-	100	79.661	ENSCAFG00000018228	-	50	55.000	Canis_familiaris
ENSSSCG00000012570	-	95	83.929	ENSCAFG00000011673	-	52	67.500	Canis_familiaris
ENSSSCG00000012570	-	97	71.930	ENSCAFG00000007877	-	50	54.622	Canis_familiaris
ENSSSCG00000012570	-	85	86.000	ENSCAFG00000009915	-	51	64.317	Canis_familiaris
ENSSSCG00000012570	-	95	53.782	ENSCAFG00000003424	-	69	53.782	Canis_familiaris
ENSSSCG00000012570	-	100	86.441	ENSCAFG00000017848	-	50	64.069	Canis_familiaris
ENSSSCG00000012570	-	93	80.000	ENSCAFG00000006937	-	50	59.149	Canis_familiaris
ENSSSCG00000012570	-	100	77.966	ENSCAFG00000008814	-	51	58.824	Canis_familiaris
ENSSSCG00000012570	-	97	61.404	ENSCAFG00000032203	-	53	51.092	Canis_familiaris
ENSSSCG00000012570	-	100	83.051	ENSCAFG00000003316	-	52	64.167	Canis_familiaris
ENSSSCG00000012570	-	100	84.746	ENSCAFG00000023540	-	50	57.917	Canis_familiaris
ENSSSCG00000012570	-	100	83.051	ENSCAFG00000031488	-	52	66.250	Canis_familiaris
ENSSSCG00000012570	-	93	62.232	ENSCAFG00020017073	-	68	62.232	Canis_lupus_dingo
ENSSSCG00000012570	-	100	83.051	ENSCAFG00020024277	-	52	66.250	Canis_lupus_dingo
ENSSSCG00000012570	-	100	83.051	ENSCAFG00020021583	-	52	63.866	Canis_lupus_dingo
ENSSSCG00000012570	-	95	60.084	ENSCHIG00000007885	-	54	60.084	Capra_hircus
ENSSSCG00000012570	-	100	77.966	ENSTSYG00000037358	-	75	52.941	Carlito_syrichta
ENSSSCG00000012570	-	100	72.881	ENSCLAG00000001592	-	52	51.261	Chinchilla_lanigera
ENSSSCG00000012570	-	100	55.932	ENSCLAG00000007765	-	54	54.202	Chinchilla_lanigera
ENSSSCG00000012570	-	100	84.746	ENSCGRG00001012657	-	52	66.807	Cricetulus_griseus_chok1gshd
ENSSSCG00000012570	-	100	83.051	ENSCGRG00000010989	-	52	66.807	Cricetulus_griseus_crigri
ENSSSCG00000012570	-	83	61.458	ENSDNOG00000038224	-	71	61.458	Dasypus_novemcinctus
ENSSSCG00000012570	-	97	59.649	ENSDNOG00000034450	-	55	51.000	Dasypus_novemcinctus
ENSSSCG00000012570	-	100	77.966	ENSDNOG00000033166	-	52	65.126	Dasypus_novemcinctus
ENSSSCG00000012570	-	93	70.909	ENSDNOG00000037208	-	58	69.925	Dasypus_novemcinctus
ENSSSCG00000012570	-	100	57.627	ENSDNOG00000045466	-	55	60.173	Dasypus_novemcinctus
ENSSSCG00000012570	-	94	42.731	ENSDNOG00000040630	-	51	42.731	Dasypus_novemcinctus
ENSSSCG00000012570	-	100	81.356	ENSDORG00000024109	-	53	62.338	Dipodomys_ordii
ENSSSCG00000012570	-	95	53.275	ENSETEG00000005291	-	56	53.275	Echinops_telfairi
ENSSSCG00000012570	-	92	53.704	ENSETEG00000009747	-	51	48.936	Echinops_telfairi
ENSSSCG00000012570	-	93	72.727	ENSETEG00000001825	-	51	51.709	Echinops_telfairi
ENSSSCG00000012570	-	88	69.231	ENSETEG00000009324	-	52	51.681	Echinops_telfairi
ENSSSCG00000012570	-	96	53.247	ENSETEG00000013026	-	84	53.247	Echinops_telfairi
ENSSSCG00000012570	-	76	77.778	ENSETEG00000017689	-	51	48.000	Echinops_telfairi
ENSSSCG00000012570	-	96	53.680	ENSETEG00000011373	-	66	53.680	Echinops_telfairi
ENSSSCG00000012570	-	92	68.519	ENSETEG00000014550	-	57	49.027	Echinops_telfairi
ENSSSCG00000012570	-	100	81.356	ENSGGOG00000037035	-	50	67.982	Gorilla_gorilla
ENSSSCG00000012570	-	100	77.966	ENSGGOG00000042480	-	88	45.745	Gorilla_gorilla
ENSSSCG00000012570	-	100	81.356	ENSGGOG00000042155	-	54	43.333	Gorilla_gorilla
ENSSSCG00000012570	-	95	82.143	ENSHGLG00000020347	-	52	62.917	Heterocephalus_glaber_female
ENSSSCG00000012570	-	100	86.441	ENSHGLG00000016330	-	50	53.782	Heterocephalus_glaber_female
ENSSSCG00000012570	-	100	81.356	ENSHGLG00000008769	-	55	65.126	Heterocephalus_glaber_female
ENSSSCG00000012570	-	83	87.755	ENSHGLG00100000701	-	52	58.750	Heterocephalus_glaber_male
ENSSSCG00000012570	-	95	63.025	ENSHGLG00100011073	-	57	63.025	Heterocephalus_glaber_male
ENSSSCG00000012570	-	95	64.286	ENSHGLG00100010038	-	57	64.286	Heterocephalus_glaber_male
ENSSSCG00000012570	-	95	58.824	ENSHGLG00100003930	-	55	58.824	Heterocephalus_glaber_male
ENSSSCG00000012570	-	100	64.407	ENSHGLG00100004521	-	52	62.185	Heterocephalus_glaber_male
ENSSSCG00000012570	-	93	81.818	ENSHGLG00100017822	-	50	47.479	Heterocephalus_glaber_male
ENSSSCG00000012570	-	95	82.143	ENSHGLG00100019663	-	51	63.025	Heterocephalus_glaber_male
ENSSSCG00000012570	-	100	84.746	ENSSTOG00000024410	-	53	56.723	Ictidomys_tridecemlineatus
ENSSSCG00000012570	-	91	60.000	ENSSTOG00000030708	-	53	60.000	Ictidomys_tridecemlineatus
ENSSSCG00000012570	-	100	76.271	ENSLAFG00000031363	-	51	60.759	Loxodonta_africana
ENSSSCG00000012570	-	97	75.439	ENSLAFG00000031338	-	52	61.667	Loxodonta_africana
ENSSSCG00000012570	-	100	71.186	ENSLAFG00000006909	-	51	55.882	Loxodonta_africana
ENSSSCG00000012570	-	95	64.126	ENSLAFG00000027371	-	57	64.126	Loxodonta_africana
ENSSSCG00000012570	-	100	84.746	ENSMFAG00000039164	-	51	63.750	Macaca_fascicularis
ENSSSCG00000012570	-	100	84.746	ENSMMUG00000043656	-	54	66.522	Macaca_mulatta
ENSSSCG00000012570	-	100	84.746	ENSMNEG00000040220	-	76	52.326	Macaca_nemestrina
ENSSSCG00000012570	-	100	86.441	ENSMLEG00000024279	-	76	51.163	Mandrillus_leucophaeus
ENSSSCG00000012570	-	92	87.037	ENSMAUG00000017650	-	54	64.706	Mesocricetus_auratus
ENSSSCG00000012570	-	96	61.250	ENSMICG00000049506	-	57	61.250	Microcebus_murinus
ENSSSCG00000012570	-	100	66.102	ENSMOCG00000019804	-	52	60.870	Microtus_ochrogaster
ENSSSCG00000012570	-	95	60.684	ENSMPUG00000002872	-	52	60.684	Mustela_putorius_furo
ENSSSCG00000012570	-	97	73.684	ENSMPUG00000004248	-	51	56.723	Mustela_putorius_furo
ENSSSCG00000012570	-	80	85.106	ENSMPUG00000001550	-	52	63.598	Mustela_putorius_furo
ENSSSCG00000012570	-	95	53.165	ENSMLUG00000029290	-	63	53.165	Myotis_lucifugus
ENSSSCG00000012570	-	100	83.051	ENSNGAG00000012044	-	57	56.485	Nannospalax_galili
ENSSSCG00000012570	-	96	70.642	ENSNLEG00000029516	-	53	70.642	Nomascus_leucogenys
ENSSSCG00000012570	-	100	72.881	ENSOCUG00000024453	-	52	55.230	Oryctolagus_cuniculus
ENSSSCG00000012570	-	98	56.897	ENSOCUG00000022890	-	50	46.288	Oryctolagus_cuniculus
ENSSSCG00000012570	-	100	71.186	ENSOGAG00000034482	-	52	56.846	Otolemur_garnettii
ENSSSCG00000012570	-	100	71.186	ENSOARG00000018734	-	51	51.250	Ovis_aries
ENSSSCG00000012570	-	94	49.333	ENSOARG00000013651	-	58	49.333	Ovis_aries
ENSSSCG00000012570	-	94	41.395	ENSOARG00000018371	-	64	41.395	Ovis_aries
ENSSSCG00000012570	-	100	84.746	ENSOARG00000008927	-	51	59.227	Ovis_aries
ENSSSCG00000012570	-	100	83.051	ENSPPAG00000039681	-	58	65.401	Pan_paniscus
ENSSSCG00000012570	-	100	77.966	ENSPPAG00000036232	-	52	58.929	Pan_paniscus
ENSSSCG00000012570	-	100	77.966	ENSPTRG00000047542	-	51	58.333	Pan_troglodytes
ENSSSCG00000012570	-	100	81.356	ENSPTRG00000048890	-	51	65.401	Pan_troglodytes
ENSSSCG00000012570	-	100	86.441	ENSPANG00000012942	-	54	64.167	Papio_anubis
ENSSSCG00000012570	-	100	86.441	ENSPCOG00000018642	-	77	51.136	Propithecus_coquereli
ENSSSCG00000012570	-	100	79.661	ENSPCOG00000018907	-	50	56.723	Propithecus_coquereli
ENSSSCG00000012570	-	76	88.889	ENSSBOG00000032457	-	53	63.750	Saimiri_boliviensis_boliviensis
ENSSSCG00000012570	-	100	84.746	ENSSBOG00000022443	-	50	73.822	Saimiri_boliviensis_boliviensis
ENSSSCG00000012570	-	100	81.356	ENSSBOG00000034828	-	54	64.167	Saimiri_boliviensis_boliviensis
ENSSSCG00000012570	-	100	81.356	ENSSHAG00000001743	-	54	54.852	Sarcophilus_harrisii
ENSSSCG00000012570	-	83	83.673	ENSUMAG00000025557	-	54	60.417	Ursus_maritimus
ENSSSCG00000012570	-	100	69.492	ENSUMAG00000013062	-	57	58.750	Ursus_maritimus
ENSSSCG00000012570	-	100	83.051	ENSVVUG00000014337	-	54	64.317	Vulpes_vulpes
ENSSSCG00000012570	-	98	67.241	ENSVVUG00000025860	-	52	63.750	Vulpes_vulpes
ENSSSCG00000012570	-	100	79.661	ENSVVUG00000006281	-	52	65.690	Vulpes_vulpes
ENSSSCG00000012570	-	93	78.182	ENSVVUG00000004538	-	52	71.429	Vulpes_vulpes