EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000012693 (Gene tree)
Gene ID: 100521652
Gene Symbol: -
Alias: -
Full Name: cancer/testis antigen 55
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 119567 bases
Position: chrX:110843956-110963522
Accession: 100521652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000041183	S1-like	PF14444.6	1.6e-18	1	1
ENSSSCP00000050239	S1-like	PF14444.6	1.8e-18	1	1
ENSSSCP00000013493	S1-like	PF14444.6	1e-11	1	1
ENSSSCP00000046048	S1-like	PF14444.6	1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000057498	-	5370	-	ENSSSCP00000041183	254 (aa)	-	A0A287ABI9
ENSSSCT00000013876	-	1343	-	ENSSSCP00000013493	238 (aa)	-	F1RTC6
ENSSSCT00000063567	-	1150	-	ENSSSCP00000046048	238 (aa)	-	F1RTC6
ENSSSCT00000062875	-	5236	XM_021080816	ENSSSCP00000050239	249 (aa)	XP_020936475	A0A287B1X4

Gene Model

Click here to download ENSSSCG00000012693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012693's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012693	-	88	70.404	ENSAMEG00000011275	-	92	70.404	Ailuropoda_melanoleuca
ENSSSCG00000012693	-	89	73.451	ENSBTAG00000019546	-	92	73.451	Bos_taurus
ENSSSCG00000012693	-	84	77.033	ENSECAG00000023653	-	75	73.543	Equus_caballus
ENSSSCG00000012693	-	92	67.382	ENSFCAG00000040592	-	86	67.382	Felis_catus
ENSSSCG00000012693	-	83	55.072	ENSFDAG00000014581	-	87	55.072	Fukomys_damarensis
ENSSSCG00000012693	-	85	67.606	ENSLAFG00000031787	-	89	67.606	Loxodonta_africana
ENSSSCG00000012693	-	86	73.364	ENSMPUG00000012664	-	88	73.364	Mustela_putorius_furo
ENSSSCG00000012693	-	84	77.251	ENSOARG00000011848	-	88	77.251	Ovis_aries
ENSSSCG00000012693	-	90	66.376	ENSPTIG00000013416	-	94	66.376	Panthera_tigris_altaica