EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000012839 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerases I%2C II%2C and III subunit RPABC5-like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 205 bases
Position: chr1:109823182-109823386
Accession: 102164011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000013649	RNA_pol_N	PF01194.17	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014034	-	186	XM_013992908	ENSSSCP00000013649	61 (aa)	XP_013848362	F2Z551

Gene Model

Click here to download ENSSSCG00000012839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000012839	-	100	54.098	ENSSSCG00000039389	-	100	54.098
ENSSSCG00000012839	-	100	65.672	ENSSSCG00000000461	-	100	65.672
ENSSSCG00000012839	-	100	71.642	ENSSSCG00000033068	-	100	71.642

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012839	-	100	71.642	ENSG00000177700	POLR2L	100	71.642	Homo_sapiens
ENSSSCG00000012839	-	100	71.642	ENSAPOG00000011116	polr2l	100	71.642	Acanthochromis_polyacanthus
ENSSSCG00000012839	-	100	71.642	ENSACIG00000005514	polr2l	100	71.642	Amphilophus_citrinellus
ENSSSCG00000012839	-	100	71.642	ENSAOCG00000012342	polr2l	100	71.642	Amphiprion_ocellaris
ENSSSCG00000012839	-	100	71.642	ENSAPEG00000015365	polr2l	100	71.642	Amphiprion_percula
ENSSSCG00000012839	-	100	71.642	ENSATEG00000007953	polr2l	100	71.642	Anabas_testudineus
ENSSSCG00000012839	-	100	71.642	ENSACAG00000015509	POLR2L	100	71.642	Anolis_carolinensis
ENSSSCG00000012839	-	100	71.642	ENSANAG00000022996	POLR2L	100	71.642	Aotus_nancymaae
ENSSSCG00000012839	-	100	71.642	ENSACLG00000026685	polr2l	100	71.642	Astatotilapia_calliptera
ENSSSCG00000012839	-	100	71.642	ENSAMXG00000037735	polr2l	100	71.642	Astyanax_mexicanus
ENSSSCG00000012839	-	100	71.642	ENSBTAG00000031061	POLR2L	100	71.642	Bos_taurus
ENSSSCG00000012839	-	100	61.194	WBGene00021347	rpb-10	100	61.194	Caenorhabditis_elegans
ENSSSCG00000012839	-	100	71.642	ENSCJAG00000041101	POLR2L	100	71.642	Callithrix_jacchus
ENSSSCG00000012839	-	100	71.642	ENSCAFG00020017621	POLR2L	100	71.642	Canis_lupus_dingo
ENSSSCG00000012839	-	100	71.642	ENSCHIG00000023006	POLR2L	100	71.642	Capra_hircus
ENSSSCG00000012839	-	100	59.016	ENSTSYG00000027353	-	100	59.016	Carlito_syrichta
ENSSSCG00000012839	-	100	71.642	ENSCPOG00000033252	POLR2L	100	71.642	Cavia_porcellus
ENSSSCG00000012839	-	100	71.642	ENSCCAG00000035630	POLR2L	100	71.642	Cebus_capucinus
ENSSSCG00000012839	-	100	52.941	ENSCATG00000034571	-	100	52.941	Cercocebus_atys
ENSSSCG00000012839	-	100	71.642	ENSCATG00000041490	POLR2L	100	71.642	Cercocebus_atys
ENSSSCG00000012839	-	100	71.642	ENSCLAG00000002071	POLR2L	100	71.642	Chinchilla_lanigera
ENSSSCG00000012839	-	100	71.642	ENSCSAG00000010528	POLR2L	100	71.642	Chlorocebus_sabaeus
ENSSSCG00000012839	-	100	71.642	ENSCPBG00000007106	POLR2L	100	71.642	Chrysemys_picta_bellii
ENSSSCG00000012839	-	100	65.672	ENSCSAVG00000006078	-	100	65.672	Ciona_savignyi
ENSSSCG00000012839	-	100	71.642	ENSCANG00000043116	POLR2L	100	71.642	Colobus_angolensis_palliatus
ENSSSCG00000012839	-	100	71.642	ENSCGRG00001023078	-	100	71.642	Cricetulus_griseus_chok1gshd
ENSSSCG00000012839	-	100	70.149	ENSCGRG00001003398	-	87	70.149	Cricetulus_griseus_chok1gshd
ENSSSCG00000012839	-	100	71.642	ENSCGRG00000018042	-	100	71.642	Cricetulus_griseus_crigri
ENSSSCG00000012839	-	100	70.149	ENSCGRG00000019284	-	87	70.149	Cricetulus_griseus_crigri
ENSSSCG00000012839	-	100	71.642	ENSCSEG00000001959	polr2l	100	71.642	Cynoglossus_semilaevis
ENSSSCG00000012839	-	100	71.642	ENSCVAG00000007386	polr2l	100	71.642	Cyprinodon_variegatus
ENSSSCG00000012839	-	100	71.642	ENSDARG00000058349	polr2l	100	71.642	Danio_rerio
ENSSSCG00000012839	-	95	58.065	ENSDNOG00000049434	-	100	58.065	Dasypus_novemcinctus
ENSSSCG00000012839	-	100	65.672	FBgn0039218	Rpb10	100	65.672	Drosophila_melanogaster
ENSSSCG00000012839	-	100	71.642	ENSETEG00000012556	POLR2L	100	71.642	Echinops_telfairi
ENSSSCG00000012839	-	100	70.149	ENSEBUG00000010353	-	100	70.149	Eptatretus_burgeri
ENSSSCG00000012839	-	100	70.149	ENSEBUG00000000392	-	100	70.149	Eptatretus_burgeri
ENSSSCG00000012839	-	100	59.701	ENSEASG00005017228	-	85	59.701	Equus_asinus_asinus
ENSSSCG00000012839	-	100	71.642	ENSEASG00005007478	POLR2L	100	71.642	Equus_asinus_asinus
ENSSSCG00000012839	-	100	58.209	ENSECAG00000001180	POLR2L	85	58.209	Equus_caballus
ENSSSCG00000012839	-	100	71.642	ENSECAG00000031030	POLR2L	100	71.642	Equus_caballus
ENSSSCG00000012839	-	100	59.701	ENSEEUG00000015795	-	100	59.701	Erinaceus_europaeus
ENSSSCG00000012839	-	100	71.642	ENSELUG00000009612	RPAB5	100	71.642	Esox_lucius
ENSSSCG00000012839	-	100	71.642	ENSFCAG00000043112	POLR2L	100	71.642	Felis_catus
ENSSSCG00000012839	-	100	71.642	ENSFALG00000012058	POLR2L	100	71.642	Ficedula_albicollis
ENSSSCG00000012839	-	100	71.642	ENSFDAG00000021533	POLR2L	100	71.642	Fukomys_damarensis
ENSSSCG00000012839	-	100	71.642	ENSFHEG00000019804	polr2l	100	71.642	Fundulus_heteroclitus
ENSSSCG00000012839	-	100	71.642	ENSGMOG00000001279	polr2l	100	71.642	Gadus_morhua
ENSSSCG00000012839	-	100	71.642	ENSGALG00000006841	POLR2L	100	71.642	Gallus_gallus
ENSSSCG00000012839	-	100	71.642	ENSGAFG00000013789	polr2l	100	71.642	Gambusia_affinis
ENSSSCG00000012839	-	100	71.642	ENSGAGG00000017751	-	51	71.642	Gopherus_agassizii
ENSSSCG00000012839	-	100	70.149	ENSGAGG00000006577	POLR2L	100	70.149	Gopherus_agassizii
ENSSSCG00000012839	-	98	50.794	ENSGGOG00000040273	-	100	50.794	Gorilla_gorilla
ENSSSCG00000012839	-	100	71.642	ENSGGOG00000010821	POLR2L	100	71.642	Gorilla_gorilla
ENSSSCG00000012839	-	100	71.642	ENSHBUG00000013767	polr2l	100	71.642	Haplochromis_burtoni
ENSSSCG00000012839	-	100	71.642	ENSHGLG00000007095	POLR2L	100	71.642	Heterocephalus_glaber_female
ENSSSCG00000012839	-	100	71.642	ENSHGLG00100010399	POLR2L	100	71.642	Heterocephalus_glaber_male
ENSSSCG00000012839	-	100	70.149	ENSHCOG00000008730	polr2l	100	70.149	Hippocampus_comes
ENSSSCG00000012839	-	100	70.149	ENSIPUG00000017431	polr2l	100	70.149	Ictalurus_punctatus
ENSSSCG00000012839	-	98	61.194	ENSSTOG00000022797	-	81	61.194	Ictidomys_tridecemlineatus
ENSSSCG00000012839	-	100	71.642	ENSJJAG00000011194	-	100	71.642	Jaculus_jaculus
ENSSSCG00000012839	-	100	65.672	ENSJJAG00000011334	-	100	65.672	Jaculus_jaculus
ENSSSCG00000012839	-	100	71.642	ENSKMAG00000003267	polr2l	100	71.642	Kryptolebias_marmoratus
ENSSSCG00000012839	-	100	70.149	ENSLBEG00000000928	polr2l	100	70.149	Labrus_bergylta
ENSSSCG00000012839	-	100	70.149	ENSLACG00000017570	POLR2L	100	70.149	Latimeria_chalumnae
ENSSSCG00000012839	-	100	71.642	ENSMFAG00000001554	POLR2L	100	71.642	Macaca_fascicularis
ENSSSCG00000012839	-	100	71.642	ENSMNEG00000026729	POLR2L	100	71.642	Macaca_nemestrina
ENSSSCG00000012839	-	100	54.412	ENSMLEG00000042017	-	100	54.412	Mandrillus_leucophaeus
ENSSSCG00000012839	-	100	70.149	ENSMAMG00000021937	polr2l	100	70.149	Mastacembelus_armatus
ENSSSCG00000012839	-	100	71.642	ENSMZEG00005000960	polr2l	100	71.642	Maylandia_zebra
ENSSSCG00000012839	-	100	71.642	ENSMGAG00000011610	POLR2L	100	71.642	Meleagris_gallopavo
ENSSSCG00000012839	-	100	71.642	ENSMAUG00000019023	Polr2l	100	71.642	Mesocricetus_auratus
ENSSSCG00000012839	-	100	71.642	ENSMICG00000047069	POLR2L	100	71.642	Microcebus_murinus
ENSSSCG00000012839	-	100	71.642	ENSMOCG00000021062	Polr2l	100	71.642	Microtus_ochrogaster
ENSSSCG00000012839	-	100	71.642	ENSMMOG00000017276	polr2l	100	71.642	Mola_mola
ENSSSCG00000012839	-	100	70.149	ENSMALG00000018890	polr2l	100	70.149	Monopterus_albus
ENSSSCG00000012839	-	100	71.642	MGP_CAROLIEiJ_G0030702	Polr2l	100	71.642	Mus_caroli
ENSSSCG00000012839	-	100	71.642	ENSMUSG00000038489	Polr2l	100	71.642	Mus_musculus
ENSSSCG00000012839	-	100	71.642	MGP_PahariEiJ_G0013901	Polr2l	100	71.642	Mus_pahari
ENSSSCG00000012839	-	100	71.642	ENSMLUG00000005362	POLR2L	100	71.642	Myotis_lucifugus
ENSSSCG00000012839	-	100	71.212	ENSNGAG00000014203	-	100	71.212	Nannospalax_galili
ENSSSCG00000012839	-	100	71.642	ENSNGAG00000015204	-	100	71.642	Nannospalax_galili
ENSSSCG00000012839	-	100	71.642	ENSNBRG00000013837	polr2l	100	71.642	Neolamprologus_brichardi
ENSSSCG00000012839	-	100	71.642	ENSNLEG00000008683	POLR2L	100	71.642	Nomascus_leucogenys
ENSSSCG00000012839	-	100	71.642	ENSMEUG00000003938	POLR2L	100	71.642	Notamacropus_eugenii
ENSSSCG00000012839	-	100	71.642	ENSOPRG00000009675	-	100	71.642	Ochotona_princeps
ENSSSCG00000012839	-	100	70.149	ENSOPRG00000001702	-	100	70.149	Ochotona_princeps
ENSSSCG00000012839	-	100	71.642	ENSODEG00000016905	-	100	71.642	Octodon_degus
ENSSSCG00000012839	-	100	68.657	ENSODEG00000014372	-	100	68.657	Octodon_degus
ENSSSCG00000012839	-	100	71.642	ENSORLG00000027182	polr2l	99	71.642	Oryzias_latipes
ENSSSCG00000012839	-	100	71.642	ENSORLG00020012637	polr2l	99	71.642	Oryzias_latipes_hni
ENSSSCG00000012839	-	100	71.642	ENSORLG00015011064	polr2l	99	71.642	Oryzias_latipes_hsok
ENSSSCG00000012839	-	100	71.642	ENSOMEG00000020485	polr2l	99	71.642	Oryzias_melastigma
ENSSSCG00000012839	-	100	71.642	ENSOGAG00000024166	POLR2L	100	71.642	Otolemur_garnettii
ENSSSCG00000012839	-	57	71.429	ENSPTIG00000012764	POLR2L	52	71.429	Panthera_tigris_altaica
ENSSSCG00000012839	-	100	71.642	ENSPTRG00000052712	POLR2L	100	71.642	Pan_troglodytes
ENSSSCG00000012839	-	100	71.642	ENSPANG00000032375	POLR2L	100	71.642	Papio_anubis
ENSSSCG00000012839	-	100	71.642	ENSPKIG00000017973	polr2l	84	71.642	Paramormyrops_kingsleyae
ENSSSCG00000012839	-	100	71.642	ENSPSIG00000013867	POLR2L	100	71.642	Pelodiscus_sinensis
ENSSSCG00000012839	-	100	67.164	ENSPMGG00000004854	polr2l	100	67.164	Periophthalmus_magnuspinnatus
ENSSSCG00000012839	-	100	70.149	ENSPEMG00000014839	-	100	70.149	Peromyscus_maniculatus_bairdii
ENSSSCG00000012839	-	100	71.642	ENSPCIG00000008250	-	100	71.642	Phascolarctos_cinereus
ENSSSCG00000012839	-	100	62.687	ENSPCIG00000011752	-	100	62.687	Phascolarctos_cinereus
ENSSSCG00000012839	-	100	71.642	ENSPFOG00000004650	polr2l	100	71.642	Poecilia_formosa
ENSSSCG00000012839	-	100	71.642	ENSPLAG00000010698	polr2l	100	71.642	Poecilia_latipinna
ENSSSCG00000012839	-	100	71.642	ENSPMEG00000015438	polr2l	100	71.642	Poecilia_mexicana
ENSSSCG00000012839	-	100	71.642	ENSPREG00000022948	polr2l	100	71.642	Poecilia_reticulata
ENSSSCG00000012839	-	100	71.642	ENSPPYG00000029850	POLR2L	100	71.642	Pongo_abelii
ENSSSCG00000012839	-	100	71.642	ENSPCAG00000011644	POLR2L	100	71.642	Procavia_capensis
ENSSSCG00000012839	-	100	71.642	ENSPVAG00000014859	POLR2L	100	71.642	Pteropus_vampyrus
ENSSSCG00000012839	-	100	71.642	ENSPNYG00000007348	polr2l	100	71.642	Pundamilia_nyererei
ENSSSCG00000012839	-	100	71.642	ENSPNAG00000015066	polr2l	100	71.642	Pygocentrus_nattereri
ENSSSCG00000012839	-	100	73.134	ENSRNOG00000023805	AABR07042789.1	100	73.134	Rattus_norvegicus
ENSSSCG00000012839	-	100	71.642	ENSRBIG00000033751	POLR2L	100	71.642	Rhinopithecus_bieti
ENSSSCG00000012839	-	100	71.642	ENSRROG00000001154	-	100	71.642	Rhinopithecus_roxellana
ENSSSCG00000012839	-	100	71.642	ENSRROG00000045437	-	100	71.642	Rhinopithecus_roxellana
ENSSSCG00000012839	-	100	57.353	YOR210W	RPB10	97	57.353	Saccharomyces_cerevisiae
ENSSSCG00000012839	-	100	62.295	ENSSBOG00000026975	-	100	62.295	Saimiri_boliviensis_boliviensis
ENSSSCG00000012839	-	100	68.657	ENSSFOG00015010252	polr2l	100	68.657	Scleropages_formosus
ENSSSCG00000012839	-	100	71.642	ENSSMAG00000021392	polr2l	100	71.642	Scophthalmus_maximus
ENSSSCG00000012839	-	100	70.149	ENSSDUG00000008725	polr2l	100	70.149	Seriola_dumerili
ENSSSCG00000012839	-	100	70.149	ENSSLDG00000024029	polr2l	100	70.149	Seriola_lalandi_dorsalis
ENSSSCG00000012839	-	100	71.642	ENSSARG00000007627	POLR2L	100	71.642	Sorex_araneus
ENSSSCG00000012839	-	100	65.625	ENSSPUG00000005252	POLR2L	69	65.625	Sphenodon_punctatus
ENSSSCG00000012839	-	100	71.642	ENSSPAG00000019322	polr2l	100	71.642	Stegastes_partitus
ENSSSCG00000012839	-	100	67.164	ENSTGUG00000009757	POLR2L	100	67.164	Taeniopygia_guttata
ENSSSCG00000012839	-	100	70.149	ENSTRUG00000017292	polr2l	100	70.149	Takifugu_rubripes
ENSSSCG00000012839	-	100	68.657	ENSTTRG00000012496	POLR2L	100	68.657	Tursiops_truncatus
ENSSSCG00000012839	-	100	71.642	ENSUAMG00000024755	-	100	71.642	Ursus_americanus
ENSSSCG00000012839	-	100	51.515	ENSUAMG00000016335	-	63	51.515	Ursus_americanus
ENSSSCG00000012839	-	100	71.642	ENSVVUG00000000205	POLR2L	100	71.642	Vulpes_vulpes
ENSSSCG00000012839	-	100	71.642	ENSXETG00000025768	polr2l.1	100	71.642	Xenopus_tropicalis
ENSSSCG00000012839	-	100	70.149	ENSXETG00000002878	polr2l.2	100	70.149	Xenopus_tropicalis
ENSSSCG00000012839	-	100	71.642	ENSXMAG00000007260	polr2l	100	71.642	Xiphophorus_maculatus