EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000012878 (Gene tree)
Gene ID: 100520173
Gene Symbol: IGHMBP2
Alias: CATF1|CMT2S|HCSA|HMN6|SMARD1|SMUBP2|ZFAND7
Full Name: immunoglobulin mu DNA binding protein 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 22673 bases
Position: chr2:4171793-4194465
Accession: 100520173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000013690	R3H	PF01424.22	5.2e-11	1	1
ENSSSCP00000013690	ResIII	PF04851.15	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014076	IGHMBP2-201	2826	XM_021082692	ENSSSCP00000013690	941 (aa)	XP_020938351	F1RY71

Gene Model

Click here to download ENSSSCG00000012878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012878	IGHMBP2	99	76.660	ENSG00000132740	IGHMBP2	100	93.103	Homo_sapiens
ENSSSCG00000012878	IGHMBP2	99	55.176	ENSAPOG00000009399	ighmbp2	99	55.377	Acanthochromis_polyacanthus
ENSSSCG00000012878	IGHMBP2	99	77.416	ENSAMEG00000008568	IGHMBP2	100	77.722	Ailuropoda_melanoleuca
ENSSSCG00000012878	IGHMBP2	99	54.372	ENSACIG00000004670	ighmbp2	99	54.372	Amphilophus_citrinellus
ENSSSCG00000012878	IGHMBP2	99	54.839	ENSAOCG00000019390	ighmbp2	99	55.040	Amphiprion_ocellaris
ENSSSCG00000012878	IGHMBP2	99	54.793	ENSAPEG00000021713	ighmbp2	99	54.995	Amphiprion_percula
ENSSSCG00000012878	IGHMBP2	99	55.190	ENSATEG00000010246	ighmbp2	96	55.489	Anabas_testudineus
ENSSSCG00000012878	IGHMBP2	96	63.987	ENSAPLG00000003251	IGHMBP2	99	63.938	Anas_platyrhynchos
ENSSSCG00000012878	IGHMBP2	99	57.654	ENSACAG00000013702	IGHMBP2	99	57.921	Anolis_carolinensis
ENSSSCG00000012878	IGHMBP2	99	75.956	ENSANAG00000027309	IGHMBP2	99	76.008	Aotus_nancymaae
ENSSSCG00000012878	IGHMBP2	99	55.544	ENSACLG00000014140	ighmbp2	99	55.835	Astatotilapia_calliptera
ENSSSCG00000012878	IGHMBP2	99	55.138	ENSAMXG00000000503	ighmbp2	99	55.281	Astyanax_mexicanus
ENSSSCG00000012878	IGHMBP2	100	79.091	ENSBTAG00000022185	IGHMBP2	100	79.091	Bos_taurus
ENSSSCG00000012878	IGHMBP2	99	74.653	ENSCJAG00000015887	IGHMBP2	93	74.727	Callithrix_jacchus
ENSSSCG00000012878	IGHMBP2	99	77.744	ENSCAFG00000010745	IGHMBP2	99	77.621	Canis_familiaris
ENSSSCG00000012878	IGHMBP2	68	71.388	ENSCAFG00020015362	IGHMBP2	89	71.849	Canis_lupus_dingo
ENSSSCG00000012878	IGHMBP2	100	79.675	ENSCHIG00000011703	IGHMBP2	100	79.675	Capra_hircus
ENSSSCG00000012878	IGHMBP2	98	73.231	ENSCAPG00000001471	IGHMBP2	99	73.333	Cavia_aperea
ENSSSCG00000012878	IGHMBP2	99	74.112	ENSCPOG00000007063	IGHMBP2	94	74.343	Cavia_porcellus
ENSSSCG00000012878	IGHMBP2	99	76.056	ENSCCAG00000027106	IGHMBP2	99	76.056	Cebus_capucinus
ENSSSCG00000012878	IGHMBP2	99	68.952	ENSCATG00000031229	IGHMBP2	99	69.355	Cercocebus_atys
ENSSSCG00000012878	IGHMBP2	99	74.470	ENSCLAG00000015500	IGHMBP2	99	74.571	Chinchilla_lanigera
ENSSSCG00000012878	IGHMBP2	99	74.800	ENSCSAG00000009185	IGHMBP2	99	75.300	Chlorocebus_sabaeus
ENSSSCG00000012878	IGHMBP2	93	63.050	ENSCPBG00000008799	IGHMBP2	99	63.050	Chrysemys_picta_bellii
ENSSSCG00000012878	IGHMBP2	91	49.558	ENSCING00000005102	zf(an1/a20like)-2	99	42.413	Ciona_intestinalis
ENSSSCG00000012878	IGHMBP2	99	44.036	ENSCSAVG00000006222	-	99	44.290	Ciona_savignyi
ENSSSCG00000012878	IGHMBP2	99	74.649	ENSCANG00000043714	IGHMBP2	99	75.150	Colobus_angolensis_palliatus
ENSSSCG00000012878	IGHMBP2	99	71.530	ENSCGRG00001019126	Ighmbp2	99	72.194	Cricetulus_griseus_chok1gshd
ENSSSCG00000012878	IGHMBP2	99	71.530	ENSCGRG00000009642	Ighmbp2	99	72.194	Cricetulus_griseus_crigri
ENSSSCG00000012878	IGHMBP2	99	53.986	ENSCSEG00000007513	ighmbp2	99	54.435	Cynoglossus_semilaevis
ENSSSCG00000012878	IGHMBP2	96	56.230	ENSCVAG00000007876	ighmbp2	98	56.296	Cyprinodon_variegatus
ENSSSCG00000012878	IGHMBP2	99	54.016	ENSDARG00000069274	ighmbp2	99	54.246	Danio_rerio
ENSSSCG00000012878	IGHMBP2	99	73.293	ENSDNOG00000002334	IGHMBP2	99	73.509	Dasypus_novemcinctus
ENSSSCG00000012878	IGHMBP2	97	66.632	ENSDORG00000026350	Ighmbp2	99	66.946	Dipodomys_ordii
ENSSSCG00000012878	IGHMBP2	93	70.317	ENSETEG00000003178	IGHMBP2	92	70.317	Echinops_telfairi
ENSSSCG00000012878	IGHMBP2	99	49.203	ENSEBUG00000010471	ighmbp2	99	49.203	Eptatretus_burgeri
ENSSSCG00000012878	IGHMBP2	99	81.033	ENSEASG00005007735	IGHMBP2	99	81.454	Equus_asinus_asinus
ENSSSCG00000012878	IGHMBP2	96	77.952	ENSECAG00000019360	IGHMBP2	98	78.474	Equus_caballus
ENSSSCG00000012878	IGHMBP2	99	54.271	ENSELUG00000023450	ighmbp2	99	54.419	Esox_lucius
ENSSSCG00000012878	IGHMBP2	99	75.980	ENSFCAG00000010879	IGHMBP2	99	76.281	Felis_catus
ENSSSCG00000012878	IGHMBP2	99	60.563	ENSFALG00000011604	IGHMBP2	99	62.173	Ficedula_albicollis
ENSSSCG00000012878	IGHMBP2	97	75.214	ENSFDAG00000005011	IGHMBP2	92	75.214	Fukomys_damarensis
ENSSSCG00000012878	IGHMBP2	99	55.488	ENSFHEG00000021211	ighmbp2	99	55.690	Fundulus_heteroclitus
ENSSSCG00000012878	IGHMBP2	99	54.352	ENSGMOG00000017553	ighmbp2	99	54.591	Gadus_morhua
ENSSSCG00000012878	IGHMBP2	96	62.890	ENSGALG00000004328	IGHMBP2	99	62.814	Gallus_gallus
ENSSSCG00000012878	IGHMBP2	99	55.713	ENSGAFG00000020770	ighmbp2	99	55.758	Gambusia_affinis
ENSSSCG00000012878	IGHMBP2	99	54.126	ENSGACG00000005293	ighmbp2	99	54.652	Gasterosteus_aculeatus
ENSSSCG00000012878	IGHMBP2	99	63.353	ENSGAGG00000020312	IGHMBP2	92	63.400	Gopherus_agassizii
ENSSSCG00000012878	IGHMBP2	99	76.476	ENSGGOG00000012131	IGHMBP2	99	76.854	Gorilla_gorilla
ENSSSCG00000012878	IGHMBP2	99	55.746	ENSHBUG00000018318	ighmbp2	99	55.746	Haplochromis_burtoni
ENSSSCG00000012878	IGHMBP2	99	75.076	ENSHGLG00000006468	IGHMBP2	99	75.178	Heterocephalus_glaber_female
ENSSSCG00000012878	IGHMBP2	99	75.076	ENSHGLG00100009290	IGHMBP2	99	75.178	Heterocephalus_glaber_male
ENSSSCG00000012878	IGHMBP2	99	54.573	ENSHCOG00000018786	ighmbp2	99	55.055	Hippocampus_comes
ENSSSCG00000012878	IGHMBP2	99	54.545	ENSIPUG00000023036	ighmbp2	99	54.736	Ictalurus_punctatus
ENSSSCG00000012878	IGHMBP2	99	67.977	ENSSTOG00000003792	IGHMBP2	99	68.169	Ictidomys_tridecemlineatus
ENSSSCG00000012878	IGHMBP2	99	74.343	ENSJJAG00000022964	Ighmbp2	99	74.672	Jaculus_jaculus
ENSSSCG00000012878	IGHMBP2	99	55.870	ENSKMAG00000020284	ighmbp2	99	55.960	Kryptolebias_marmoratus
ENSSSCG00000012878	IGHMBP2	99	54.648	ENSLBEG00000014501	ighmbp2	99	55.015	Labrus_bergylta
ENSSSCG00000012878	IGHMBP2	99	56.800	ENSLACG00000018792	IGHMBP2	99	56.789	Latimeria_chalumnae
ENSSSCG00000012878	IGHMBP2	99	54.418	ENSLOCG00000001512	ighmbp2	99	54.418	Lepisosteus_oculatus
ENSSSCG00000012878	IGHMBP2	75	70.380	ENSLAFG00000022445	IGHMBP2	99	70.550	Loxodonta_africana
ENSSSCG00000012878	IGHMBP2	99	75.752	ENSMFAG00000043909	IGHMBP2	99	76.152	Macaca_fascicularis
ENSSSCG00000012878	IGHMBP2	99	72.345	ENSMNEG00000043511	IGHMBP2	99	72.946	Macaca_nemestrina
ENSSSCG00000012878	IGHMBP2	99	75.551	ENSMLEG00000043529	IGHMBP2	99	76.052	Mandrillus_leucophaeus
ENSSSCG00000012878	IGHMBP2	99	53.614	ENSMAMG00000005532	ighmbp2	99	54.300	Mastacembelus_armatus
ENSSSCG00000012878	IGHMBP2	99	55.544	ENSMZEG00005000665	ighmbp2	99	55.835	Maylandia_zebra
ENSSSCG00000012878	IGHMBP2	96	62.565	ENSMGAG00000002792	IGHMBP2	99	62.325	Meleagris_gallopavo
ENSSSCG00000012878	IGHMBP2	99	71.414	ENSMAUG00000019893	Ighmbp2	99	71.645	Mesocricetus_auratus
ENSSSCG00000012878	IGHMBP2	94	87.764	ENSMICG00000043944	IGHMBP2	99	87.764	Microcebus_murinus
ENSSSCG00000012878	IGHMBP2	99	71.371	ENSMOCG00000018939	Ighmbp2	99	71.803	Microtus_ochrogaster
ENSSSCG00000012878	IGHMBP2	99	54.057	ENSMMOG00000001234	ighmbp2	99	54.757	Mola_mola
ENSSSCG00000012878	IGHMBP2	99	62.162	ENSMODG00000004040	IGHMBP2	88	62.687	Monodelphis_domestica
ENSSSCG00000012878	IGHMBP2	99	54.352	ENSMALG00000006457	ighmbp2	99	54.555	Monopterus_albus
ENSSSCG00000012878	IGHMBP2	99	71.039	MGP_CAROLIEiJ_G0022463	Ighmbp2	99	72.032	Mus_caroli
ENSSSCG00000012878	IGHMBP2	99	70.842	ENSMUSG00000024831	Ighmbp2	99	71.903	Mus_musculus
ENSSSCG00000012878	IGHMBP2	99	71.285	MGP_PahariEiJ_G0013960	Ighmbp2	99	72.205	Mus_pahari
ENSSSCG00000012878	IGHMBP2	99	70.700	MGP_SPRETEiJ_G0014700	Ighmbp2	99	80.110	Mus_spretus
ENSSSCG00000012878	IGHMBP2	97	75.103	ENSMPUG00000004439	IGHMBP2	99	75.207	Mustela_putorius_furo
ENSSSCG00000012878	IGHMBP2	99	71.992	ENSNGAG00000006566	Ighmbp2	99	72.166	Nannospalax_galili
ENSSSCG00000012878	IGHMBP2	93	54.721	ENSNBRG00000014911	ighmbp2	99	55.032	Neolamprologus_brichardi
ENSSSCG00000012878	IGHMBP2	99	71.198	ENSNLEG00000006609	IGHMBP2	99	71.601	Nomascus_leucogenys
ENSSSCG00000012878	IGHMBP2	63	55.255	ENSOPRG00000011904	-	99	55.255	Ochotona_princeps
ENSSSCG00000012878	IGHMBP2	99	74.168	ENSODEG00000017354	IGHMBP2	99	74.168	Octodon_degus
ENSSSCG00000012878	IGHMBP2	99	55.364	ENSONIG00000015506	ighmbp2	99	55.657	Oreochromis_niloticus
ENSSSCG00000012878	IGHMBP2	99	55.354	ENSORLG00000006561	ighmbp2	99	55.354	Oryzias_latipes
ENSSSCG00000012878	IGHMBP2	99	55.364	ENSORLG00020008462	ighmbp2	99	55.466	Oryzias_latipes_hni
ENSSSCG00000012878	IGHMBP2	99	54.398	ENSORLG00015001563	ighmbp2	99	54.803	Oryzias_latipes_hsok
ENSSSCG00000012878	IGHMBP2	99	55.197	ENSOMEG00000019296	ighmbp2	99	55.882	Oryzias_melastigma
ENSSSCG00000012878	IGHMBP2	99	72.718	ENSOGAG00000011671	IGHMBP2	99	73.019	Otolemur_garnettii
ENSSSCG00000012878	IGHMBP2	97	73.403	ENSOARG00000016959	IGHMBP2	100	73.613	Ovis_aries
ENSSSCG00000012878	IGHMBP2	99	76.453	ENSPPAG00000027355	IGHMBP2	99	76.553	Pan_paniscus
ENSSSCG00000012878	IGHMBP2	99	76.837	ENSPPRG00000024194	IGHMBP2	99	76.822	Panthera_pardus
ENSSSCG00000012878	IGHMBP2	99	76.353	ENSPTRG00000003989	IGHMBP2	99	76.453	Pan_troglodytes
ENSSSCG00000012878	IGHMBP2	99	71.743	ENSPANG00000023650	IGHMBP2	99	72.445	Papio_anubis
ENSSSCG00000012878	IGHMBP2	99	55.758	ENSPKIG00000019306	ighmbp2	99	55.847	Paramormyrops_kingsleyae
ENSSSCG00000012878	IGHMBP2	90	61.883	ENSPSIG00000015808	IGHMBP2	100	61.883	Pelodiscus_sinensis
ENSSSCG00000012878	IGHMBP2	99	70.997	ENSPEMG00000017775	Ighmbp2	99	71.976	Peromyscus_maniculatus_bairdii
ENSSSCG00000012878	IGHMBP2	98	66.538	ENSPCIG00000011064	IGHMBP2	99	61.591	Phascolarctos_cinereus
ENSSSCG00000012878	IGHMBP2	99	54.473	ENSPFOG00000010607	ighmbp2	99	55.321	Poecilia_formosa
ENSSSCG00000012878	IGHMBP2	99	54.645	ENSPLAG00000003917	ighmbp2	99	55.690	Poecilia_latipinna
ENSSSCG00000012878	IGHMBP2	99	54.059	ENSPMEG00000021063	ighmbp2	99	55.145	Poecilia_mexicana
ENSSSCG00000012878	IGHMBP2	99	54.990	ENSPREG00000011223	ighmbp2	99	55.544	Poecilia_reticulata
ENSSSCG00000012878	IGHMBP2	64	70.499	ENSPPYG00000002965	-	99	71.256	Pongo_abelii
ENSSSCG00000012878	IGHMBP2	58	89.286	ENSPCAG00000003490	-	60	89.286	Procavia_capensis
ENSSSCG00000012878	IGHMBP2	99	74.621	ENSPCOG00000018759	IGHMBP2	99	75.025	Propithecus_coquereli
ENSSSCG00000012878	IGHMBP2	84	69.405	ENSPVAG00000012921	IGHMBP2	100	69.762	Pteropus_vampyrus
ENSSSCG00000012878	IGHMBP2	99	55.544	ENSPNYG00000015003	ighmbp2	99	55.835	Pundamilia_nyererei
ENSSSCG00000012878	IGHMBP2	99	53.915	ENSPNAG00000013815	ighmbp2	99	54.509	Pygocentrus_nattereri
ENSSSCG00000012878	IGHMBP2	99	71.098	ENSRNOG00000013456	Ighmbp2	99	71.134	Rattus_norvegicus
ENSSSCG00000012878	IGHMBP2	99	74.850	ENSRBIG00000044249	IGHMBP2	99	75.551	Rhinopithecus_bieti
ENSSSCG00000012878	IGHMBP2	99	75.150	ENSRROG00000045646	IGHMBP2	99	75.651	Rhinopithecus_roxellana
ENSSSCG00000012878	IGHMBP2	60	34.444	YKL017C	HCS1	91	34.340	Saccharomyces_cerevisiae
ENSSSCG00000012878	IGHMBP2	99	72.077	ENSSBOG00000021342	IGHMBP2	99	72.177	Saimiri_boliviensis_boliviensis
ENSSSCG00000012878	IGHMBP2	75	58.665	ENSSHAG00000001585	-	99	59.178	Sarcophilus_harrisii
ENSSSCG00000012878	IGHMBP2	99	57.895	ENSSFOG00015016074	ighmbp2	91	57.895	Scleropages_formosus
ENSSSCG00000012878	IGHMBP2	99	53.930	ENSSMAG00000013687	ighmbp2	99	54.618	Scophthalmus_maximus
ENSSSCG00000012878	IGHMBP2	99	53.445	ENSSDUG00000013150	ighmbp2	99	54.925	Seriola_dumerili
ENSSSCG00000012878	IGHMBP2	99	53.452	ENSSLDG00000023119	ighmbp2	99	54.573	Seriola_lalandi_dorsalis
ENSSSCG00000012878	IGHMBP2	63	58.567	ENSSPUG00000008810	IGHMBP2	99	58.706	Sphenodon_punctatus
ENSSSCG00000012878	IGHMBP2	99	54.728	ENSSPAG00000011541	ighmbp2	99	54.930	Stegastes_partitus
ENSSSCG00000012878	IGHMBP2	96	62.836	ENSTGUG00000006705	-	99	64.116	Taeniopygia_guttata
ENSSSCG00000012878	IGHMBP2	99	53.654	ENSTRUG00000003491	ighmbp2	99	54.208	Takifugu_rubripes
ENSSSCG00000012878	IGHMBP2	99	54.940	ENSTNIG00000016069	ighmbp2	99	55.131	Tetraodon_nigroviridis
ENSSSCG00000012878	IGHMBP2	81	92.473	ENSTBEG00000017260	IGHMBP2	87	92.473	Tupaia_belangeri
ENSSSCG00000012878	IGHMBP2	88	87.607	ENSTTRG00000013636	IGHMBP2	88	87.607	Tursiops_truncatus
ENSSSCG00000012878	IGHMBP2	99	79.979	ENSUAMG00000024817	IGHMBP2	100	80.396	Ursus_americanus
ENSSSCG00000012878	IGHMBP2	99	74.154	ENSUMAG00000018347	IGHMBP2	98	75.235	Ursus_maritimus
ENSSSCG00000012878	IGHMBP2	99	76.985	ENSVVUG00000004811	IGHMBP2	99	77.168	Vulpes_vulpes
ENSSSCG00000012878	IGHMBP2	91	59.719	ENSXETG00000031258	IGHMBP2	100	59.719	Xenopus_tropicalis
ENSSSCG00000012878	IGHMBP2	99	55.065	ENSXCOG00000003758	ighmbp2	99	55.657	Xiphophorus_couchianus
ENSSSCG00000012878	IGHMBP2	99	55.311	ENSXMAG00000003705	ighmbp2	99	55.657	Xiphophorus_maculatus