EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000012979 (Gene tree)
Gene ID: 100517142
Gene Symbol: RNASEH2C
Alias: AGS3|AYP1
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 1184 bases
Position: chr2:6563091-6564274
Accession: 100517142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000013801	RNase_H2_suC	PF08615.11	5.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014187	RNASEH2C-201	674	XM_005660692	ENSSSCP00000013801	167 (aa)	XP_005660749	F1RRK5

Gene Model

Click here to download ENSSSCG00000012979's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000012979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000012979	RNASEH2C	100	74.405	ENSG00000172922	RNASEH2C	100	74.405	Homo_sapiens
ENSSSCG00000012979	RNASEH2C	100	76.744	ENSAMEG00000017348	RNASEH2C	100	76.744	Ailuropoda_melanoleuca
ENSSSCG00000012979	RNASEH2C	100	73.810	ENSANAG00000032535	RNASEH2C	100	73.810	Aotus_nancymaae
ENSSSCG00000012979	RNASEH2C	100	76.048	ENSBTAG00000005577	RNASEH2C	100	76.048	Bos_taurus
ENSSSCG00000012979	RNASEH2C	100	72.619	ENSCJAG00000001965	RNASEH2C	100	72.619	Callithrix_jacchus
ENSSSCG00000012979	RNASEH2C	100	78.698	ENSCAFG00000013292	RNASEH2C	100	78.698	Canis_familiaris
ENSSSCG00000012979	RNASEH2C	100	78.698	ENSCAFG00020015077	RNASEH2C	100	78.698	Canis_lupus_dingo
ENSSSCG00000012979	RNASEH2C	100	76.647	ENSCHIG00000013681	RNASEH2C	100	77.246	Capra_hircus
ENSSSCG00000012979	RNASEH2C	65	74.545	ENSTSYG00000028658	-	65	74.545	Carlito_syrichta
ENSSSCG00000012979	RNASEH2C	100	64.671	ENSCPOG00000013696	RNASEH2C	100	64.671	Cavia_porcellus
ENSSSCG00000012979	RNASEH2C	100	73.214	ENSCCAG00000025461	RNASEH2C	100	73.214	Cebus_capucinus
ENSSSCG00000012979	RNASEH2C	99	65.060	ENSCLAG00000016534	RNASEH2C	99	65.663	Chinchilla_lanigera
ENSSSCG00000012979	RNASEH2C	100	77.381	ENSCSAG00000007985	RNASEH2C	100	77.381	Chlorocebus_sabaeus
ENSSSCG00000012979	RNASEH2C	100	77.246	ENSCANG00000039373	RNASEH2C	100	77.246	Colobus_angolensis_palliatus
ENSSSCG00000012979	RNASEH2C	100	70.833	ENSCGRG00001015383	Rnaseh2c	100	70.833	Cricetulus_griseus_chok1gshd
ENSSSCG00000012979	RNASEH2C	100	70.833	ENSCGRG00000012179	Rnaseh2c	100	70.833	Cricetulus_griseus_crigri
ENSSSCG00000012979	RNASEH2C	100	71.429	ENSDNOG00000035155	RNASEH2C	99	74.269	Dasypus_novemcinctus
ENSSSCG00000012979	RNASEH2C	100	72.455	ENSDORG00000023624	Rnaseh2c	100	72.455	Dipodomys_ordii
ENSSSCG00000012979	RNASEH2C	75	68.750	ENSETEG00000020048	-	100	68.750	Echinops_telfairi
ENSSSCG00000012979	RNASEH2C	55	63.441	ENSETEG00000015293	-	88	63.441	Echinops_telfairi
ENSSSCG00000012979	RNASEH2C	100	76.163	ENSEASG00005004302	RNASEH2C	100	76.744	Equus_asinus_asinus
ENSSSCG00000012979	RNASEH2C	100	76.163	ENSECAG00000017289	RNASEH2C	100	76.744	Equus_caballus
ENSSSCG00000012979	RNASEH2C	100	80.240	ENSFCAG00000044095	RNASEH2C	100	80.240	Felis_catus
ENSSSCG00000012979	RNASEH2C	100	56.497	ENSFDAG00000011974	RNASEH2C	100	56.497	Fukomys_damarensis
ENSSSCG00000012979	RNASEH2C	100	69.461	ENSHGLG00000013478	RNASEH2C	100	69.461	Heterocephalus_glaber_female
ENSSSCG00000012979	RNASEH2C	100	69.461	ENSHGLG00100019352	RNASEH2C	100	69.461	Heterocephalus_glaber_male
ENSSSCG00000012979	RNASEH2C	100	71.098	ENSSTOG00000019410	RNASEH2C	100	71.098	Ictidomys_tridecemlineatus
ENSSSCG00000012979	RNASEH2C	100	72.455	ENSJJAG00000019320	Rnaseh2c	100	72.455	Jaculus_jaculus
ENSSSCG00000012979	RNASEH2C	100	68.639	ENSLAFG00000015641	RNASEH2C	100	68.639	Loxodonta_africana
ENSSSCG00000012979	RNASEH2C	100	75.595	ENSMFAG00000042754	-	100	75.595	Macaca_fascicularis
ENSSSCG00000012979	RNASEH2C	100	76.786	ENSMFAG00000038096	-	100	76.786	Macaca_fascicularis
ENSSSCG00000012979	RNASEH2C	98	73.939	ENSMMUG00000019837	RNASEH2C	74	73.939	Macaca_mulatta
ENSSSCG00000012979	RNASEH2C	100	77.246	ENSMMUG00000016234	-	100	77.246	Macaca_mulatta
ENSSSCG00000012979	RNASEH2C	100	76.786	ENSMNEG00000040939	RNASEH2C	100	76.786	Macaca_nemestrina
ENSSSCG00000012979	RNASEH2C	100	70.833	ENSMAUG00000016346	Rnaseh2c	100	70.833	Mesocricetus_auratus
ENSSSCG00000012979	RNASEH2C	100	77.246	ENSMICG00000008882	RNASEH2C	100	77.246	Microcebus_murinus
ENSSSCG00000012979	RNASEH2C	100	65.476	ENSMOCG00000013231	Rnaseh2c	100	65.476	Microtus_ochrogaster
ENSSSCG00000012979	RNASEH2C	92	50.000	ENSMODG00000009547	-	91	50.000	Monodelphis_domestica
ENSSSCG00000012979	RNASEH2C	100	63.095	MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	63.095	Mus_caroli
ENSSSCG00000012979	RNASEH2C	100	66.071	ENSMUSG00000024925	Rnaseh2c	100	66.071	Mus_musculus
ENSSSCG00000012979	RNASEH2C	100	66.071	MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.071	Mus_pahari
ENSSSCG00000012979	RNASEH2C	100	75.723	ENSMPUG00000011629	RNASEH2C	100	76.301	Mustela_putorius_furo
ENSSSCG00000012979	RNASEH2C	100	75.000	ENSMLUG00000008777	RNASEH2C	100	75.000	Myotis_lucifugus
ENSSSCG00000012979	RNASEH2C	100	55.689	ENSNGAG00000020391	Rnaseh2c	100	55.689	Nannospalax_galili
ENSSSCG00000012979	RNASEH2C	100	73.653	ENSNLEG00000005833	-	100	73.653	Nomascus_leucogenys
ENSSSCG00000012979	RNASEH2C	92	45.806	ENSMEUG00000006205	-	93	45.806	Notamacropus_eugenii
ENSSSCG00000012979	RNASEH2C	100	67.857	ENSODEG00000017806	RNASEH2C	100	67.857	Octodon_degus
ENSSSCG00000012979	RNASEH2C	100	75.581	ENSOGAG00000014128	RNASEH2C	100	75.581	Otolemur_garnettii
ENSSSCG00000012979	RNASEH2C	100	76.048	ENSOARG00000017675	RNASEH2C	100	76.647	Ovis_aries
ENSSSCG00000012979	RNASEH2C	100	71.598	ENSPPAG00000042592	-	84	71.598	Pan_paniscus
ENSSSCG00000012979	RNASEH2C	100	79.641	ENSPPRG00000000774	RNASEH2C	100	79.641	Panthera_pardus
ENSSSCG00000012979	RNASEH2C	100	78.443	ENSPTIG00000011677	RNASEH2C	100	78.443	Panthera_tigris_altaica
ENSSSCG00000012979	RNASEH2C	100	75.000	ENSPTRG00000038742	RNASEH2C	100	75.000	Pan_troglodytes
ENSSSCG00000012979	RNASEH2C	99	74.096	ENSPANG00000015965	RNASEH2C	66	74.096	Papio_anubis
ENSSSCG00000012979	RNASEH2C	100	68.452	ENSPEMG00000018577	Rnaseh2c	100	68.452	Peromyscus_maniculatus_bairdii
ENSSSCG00000012979	RNASEH2C	100	74.850	ENSPPYG00000003051	RNASEH2C	100	74.850	Pongo_abelii
ENSSSCG00000012979	RNASEH2C	100	68.023	ENSPCAG00000007887	RNASEH2C	100	68.023	Procavia_capensis
ENSSSCG00000012979	RNASEH2C	100	76.048	ENSPCOG00000021092	RNASEH2C	100	76.048	Propithecus_coquereli
ENSSSCG00000012979	RNASEH2C	100	76.786	ENSPVAG00000016950	RNASEH2C	100	76.786	Pteropus_vampyrus
ENSSSCG00000012979	RNASEH2C	100	66.071	ENSRNOG00000020700	Rnaseh2c	100	66.071	Rattus_norvegicus
ENSSSCG00000012979	RNASEH2C	96	77.500	ENSRBIG00000040124	RNASEH2C	64	77.500	Rhinopithecus_bieti
ENSSSCG00000012979	RNASEH2C	96	77.500	ENSRROG00000044910	RNASEH2C	99	77.987	Rhinopithecus_roxellana
ENSSSCG00000012979	RNASEH2C	100	72.619	ENSSBOG00000034781	RNASEH2C	100	72.619	Saimiri_boliviensis_boliviensis
ENSSSCG00000012979	RNASEH2C	100	59.880	ENSTTRG00000016928	RNASEH2C	100	59.880	Tursiops_truncatus
ENSSSCG00000012979	RNASEH2C	100	76.163	ENSUAMG00000020793	RNASEH2C	100	76.163	Ursus_americanus
ENSSSCG00000012979	RNASEH2C	100	75.581	ENSUMAG00000010791	RNASEH2C	100	75.581	Ursus_maritimus
ENSSSCG00000012979	RNASEH2C	95	75.000	ENSVPAG00000006579	RNASEH2C	100	75.000	Vicugna_pacos
ENSSSCG00000012979	RNASEH2C	96	75.309	ENSVVUG00000027076	RNASEH2C	77	75.309	Vulpes_vulpes