EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000013063 (Gene tree)
Gene ID: 100516127
Gene Symbol: -
Alias: -
Full Name: terminal uridylyl transferase 1%2C U6 snRNA-specific
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 13768 bases
Position: chr2:9148509-9162276
Accession: 100516127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000013893	PAP_assoc	PF03828.19	4.6e-05	1	1
ENSSSCP00000037892	PAP_assoc	PF03828.19	5.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000045112	-	2966	XM_005660796	ENSSSCP00000037892	808 (aa)	XP_005660853	A0A287A1T8
ENSSSCT00000014279	-	3157	-	ENSSSCP00000013893	710 (aa)	-	F1RPX0

Gene Model

Click here to download ENSSSCG00000013063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000013063	-	99	88.889	ENSG00000149016	TUT1	90	89.023	Homo_sapiens
ENSSSCG00000013063	-	88	53.846	ENSAPOG00000016423	tut1	54	58.333	Acanthochromis_polyacanthus
ENSSSCG00000013063	-	100	88.202	ENSAMEG00000006723	-	90	88.369	Ailuropoda_melanoleuca
ENSSSCG00000013063	-	84	53.846	ENSAOCG00000021912	tut1	52	58.333	Amphiprion_ocellaris
ENSSSCG00000013063	-	84	53.846	ENSAPEG00000005144	tut1	72	58.333	Amphiprion_percula
ENSSSCG00000013063	-	99	88.186	ENSANAG00000029063	-	90	88.220	Aotus_nancymaae
ENSSSCG00000013063	-	87	59.016	ENSACLG00000013406	tut1	52	55.357	Astatotilapia_calliptera
ENSSSCG00000013063	-	100	89.747	ENSBTAG00000011846	TUT1	86	89.572	Bos_taurus
ENSSSCG00000013063	-	99	88.186	ENSCJAG00000033294	-	90	88.220	Callithrix_jacchus
ENSSSCG00000013063	-	100	86.555	ENSCAFG00000015822	TUT1	90	87.200	Canis_familiaris
ENSSSCG00000013063	-	100	86.555	ENSCAFG00020013039	-	90	87.200	Canis_lupus_dingo
ENSSSCG00000013063	-	100	89.747	ENSCHIG00000006765	-	86	89.572	Capra_hircus
ENSSSCG00000013063	-	100	83.146	ENSTSYG00000000147	-	82	83.155	Carlito_syrichta
ENSSSCG00000013063	-	78	80.180	ENSCAPG00000013001	-	85	79.561	Cavia_aperea
ENSSSCG00000013063	-	100	74.895	ENSCPOG00000014281	-	90	74.667	Cavia_porcellus
ENSSSCG00000013063	-	99	89.170	ENSCCAG00000018819	-	86	89.157	Cebus_capucinus
ENSSSCG00000013063	-	99	89.030	ENSCATG00000036770	-	86	88.889	Cercocebus_atys
ENSSSCG00000013063	-	100	73.380	ENSCLAG00000000215	-	90	72.423	Chinchilla_lanigera
ENSSSCG00000013063	-	99	89.311	ENSCSAG00000006566	-	95	89.290	Chlorocebus_sabaeus
ENSSSCG00000013063	-	68	94.521	ENSCHOG00000007746	-	73	82.169	Choloepus_hoffmanni
ENSSSCG00000013063	-	99	89.091	ENSCANG00000043244	-	86	88.948	Colobus_angolensis_palliatus
ENSSSCG00000013063	-	100	76.751	ENSCGRG00001017583	Tut1	85	76.800	Cricetulus_griseus_chok1gshd
ENSSSCG00000013063	-	100	76.751	ENSCGRG00000015008	Tut1	85	76.800	Cricetulus_griseus_crigri
ENSSSCG00000013063	-	92	45.833	ENSCSEG00000012807	tut1	52	47.987	Cynoglossus_semilaevis
ENSSSCG00000013063	-	81	52.055	ENSCVAG00000005396	tut1	59	54.545	Cyprinodon_variegatus
ENSSSCG00000013063	-	100	86.676	ENSDNOG00000038908	-	90	85.314	Dasypus_novemcinctus
ENSSSCG00000013063	-	100	83.544	ENSDORG00000004018	Tut1	88	83.534	Dipodomys_ordii
ENSSSCG00000013063	-	86	64.151	ENSEBUG00000014170	tut1	55	40.111	Eptatretus_burgeri
ENSSSCG00000013063	-	100	90.028	ENSEASG00005007531	-	90	90.241	Equus_asinus_asinus
ENSSSCG00000013063	-	100	90.309	ENSECAG00000009471	-	88	90.508	Equus_caballus
ENSSSCG00000013063	-	99	81.392	ENSEEUG00000001238	-	90	80.511	Erinaceus_europaeus
ENSSSCG00000013063	-	91	52.326	ENSELUG00000011532	tut1	76	56.604	Esox_lucius
ENSSSCG00000013063	-	100	88.499	ENSFCAG00000008859	-	87	88.652	Felis_catus
ENSSSCG00000013063	-	93	72.466	ENSFDAG00000021131	-	89	72.496	Fukomys_damarensis
ENSSSCG00000013063	-	92	50.685	ENSFHEG00000006279	tut1	79	53.571	Fundulus_heteroclitus
ENSSSCG00000013063	-	83	37.876	ENSGMOG00000013378	tut1	50	39.651	Gadus_morhua
ENSSSCG00000013063	-	82	59.574	ENSGACG00000009956	tut1	99	34.722	Gasterosteus_aculeatus
ENSSSCG00000013063	-	82	47.412	ENSGAGG00000007912	-	61	45.905	Gopherus_agassizii
ENSSSCG00000013063	-	99	88.467	ENSGGOG00000013564	-	86	88.621	Gorilla_gorilla
ENSSSCG00000013063	-	87	59.016	ENSHBUG00000022855	tut1	52	55.357	Haplochromis_burtoni
ENSSSCG00000013063	-	100	72.753	ENSHGLG00000002742	-	90	72.630	Heterocephalus_glaber_female
ENSSSCG00000013063	-	100	72.168	ENSHGLG00100017588	-	90	73.138	Heterocephalus_glaber_male
ENSSSCG00000013063	-	99	85.694	ENSSTOG00000002859	-	90	85.981	Ictidomys_tridecemlineatus
ENSSSCG00000013063	-	100	83.544	ENSJJAG00000022329	Tut1	90	83.802	Jaculus_jaculus
ENSSSCG00000013063	-	89	52.055	ENSKMAG00000010023	tut1	75	55.357	Kryptolebias_marmoratus
ENSSSCG00000013063	-	86	49.315	ENSLBEG00000014969	tut1	52	41.758	Labrus_bergylta
ENSSSCG00000013063	-	86	61.644	ENSLACG00000011278	tut1	56	64.151	Latimeria_chalumnae
ENSSSCG00000013063	-	89	58.333	ENSLOCG00000013105	tut1	57	60.377	Lepisosteus_oculatus
ENSSSCG00000013063	-	100	87.360	ENSLAFG00000003340	-	90	87.433	Loxodonta_africana
ENSSSCG00000013063	-	99	89.030	ENSMFAG00000000912	-	86	88.621	Macaca_fascicularis
ENSSSCG00000013063	-	99	88.748	ENSMMUG00000006595	-	86	88.353	Macaca_mulatta
ENSSSCG00000013063	-	99	88.748	ENSMNEG00000029841	-	86	88.487	Macaca_nemestrina
ENSSSCG00000013063	-	99	88.889	ENSMLEG00000040498	-	86	88.755	Mandrillus_leucophaeus
ENSSSCG00000013063	-	95	51.429	ENSMAMG00000008173	tut1	78	54.717	Mastacembelus_armatus
ENSSSCG00000013063	-	87	59.016	ENSMZEG00005009777	tut1	52	55.357	Maylandia_zebra
ENSSSCG00000013063	-	99	73.840	ENSMAUG00000012453	Tut1	100	67.853	Mesocricetus_auratus
ENSSSCG00000013063	-	99	86.901	ENSMICG00000009841	-	86	86.997	Microcebus_murinus
ENSSSCG00000013063	-	100	76.050	ENSMOCG00000015834	Tut1	85	76.000	Microtus_ochrogaster
ENSSSCG00000013063	-	89	52.055	ENSMMOG00000002589	tut1	54	55.357	Mola_mola
ENSSSCG00000013063	-	96	78.571	ENSMODG00000007710	-	85	66.800	Monodelphis_domestica
ENSSSCG00000013063	-	100	76.536	MGP_CAROLIEiJ_G0022670	Tut1	85	76.596	Mus_caroli
ENSSSCG00000013063	-	100	77.374	ENSMUSG00000071645	Tut1	86	77.394	Mus_musculus
ENSSSCG00000013063	-	100	78.852	MGP_PahariEiJ_G0014164	Tut1	85	78.667	Mus_pahari
ENSSSCG00000013063	-	100	77.235	MGP_SPRETEiJ_G0023583	Tut1	86	77.261	Mus_spretus
ENSSSCG00000013063	-	100	87.395	ENSMPUG00000013938	-	90	87.600	Mustela_putorius_furo
ENSSSCG00000013063	-	99	77.887	ENSMLUG00000000349	-	88	77.191	Myotis_lucifugus
ENSSSCG00000013063	-	100	82.517	ENSNGAG00000002988	Tut1	90	82.423	Nannospalax_galili
ENSSSCG00000013063	-	87	59.016	ENSNBRG00000022055	tut1	52	55.357	Neolamprologus_brichardi
ENSSSCG00000013063	-	99	88.889	ENSNLEG00000003780	-	86	88.889	Nomascus_leucogenys
ENSSSCG00000013063	-	90	78.927	ENSMEUG00000012756	-	76	77.104	Notamacropus_eugenii
ENSSSCG00000013063	-	72	89.691	ENSOPRG00000011835	-	70	89.655	Ochotona_princeps
ENSSSCG00000013063	-	99	72.702	ENSODEG00000002204	-	85	71.102	Octodon_degus
ENSSSCG00000013063	-	89	52.055	ENSONIG00000019913	tut1	52	55.357	Oreochromis_niloticus
ENSSSCG00000013063	-	99	86.620	ENSOCUG00000017215	-	85	86.729	Oryctolagus_cuniculus
ENSSSCG00000013063	-	65	49.315	ENSORLG00000004342	tut1	64	51.786	Oryzias_latipes
ENSSSCG00000013063	-	62	49.315	ENSORLG00015018834	tut1	55	51.786	Oryzias_latipes_hsok
ENSSSCG00000013063	-	95	49.315	ENSOMEG00000005129	tut1	64	51.786	Oryzias_melastigma
ENSSSCG00000013063	-	100	85.211	ENSOGAG00000000828	-	90	85.389	Otolemur_garnettii
ENSSSCG00000013063	-	100	84.903	ENSOARG00000015269	-	86	84.960	Ovis_aries
ENSSSCG00000013063	-	99	89.170	ENSPPAG00000037200	-	86	89.157	Pan_paniscus
ENSSSCG00000013063	-	100	88.499	ENSPPRG00000000257	-	90	88.652	Panthera_pardus
ENSSSCG00000013063	-	100	88.640	ENSPTIG00000017573	-	87	88.785	Panthera_tigris_altaica
ENSSSCG00000013063	-	99	89.030	ENSPTRG00000003770	TUT1	86	89.157	Pan_troglodytes
ENSSSCG00000013063	-	86	85.737	ENSPANG00000010908	-	82	85.824	Papio_anubis
ENSSSCG00000013063	-	82	49.004	ENSPSIG00000004972	-	53	51.351	Pelodiscus_sinensis
ENSSSCG00000013063	-	100	77.731	ENSPEMG00000018332	Tut1	85	77.067	Peromyscus_maniculatus_bairdii
ENSSSCG00000013063	-	88	57.353	ENSPMAG00000005825	tut1	50	50.667	Petromyzon_marinus
ENSSSCG00000013063	-	100	63.788	ENSPCIG00000017805	-	84	63.926	Phascolarctos_cinereus
ENSSSCG00000013063	-	92	52.055	ENSPFOG00000016195	tut1	53	44.937	Poecilia_formosa
ENSSSCG00000013063	-	92	52.055	ENSPLAG00000022064	tut1	53	44.937	Poecilia_latipinna
ENSSSCG00000013063	-	92	52.055	ENSPMEG00000019175	tut1	53	45.253	Poecilia_mexicana
ENSSSCG00000013063	-	95	52.055	ENSPREG00000020464	tut1	53	44.681	Poecilia_reticulata
ENSSSCG00000013063	-	99	89.155	ENSPPYG00000003162	-	90	89.410	Pongo_abelii
ENSSSCG00000013063	-	100	82.328	ENSPCAG00000002956	-	88	83.578	Procavia_capensis
ENSSSCG00000013063	-	99	85.814	ENSPCOG00000017464	-	86	85.960	Propithecus_coquereli
ENSSSCG00000013063	-	82	93.617	ENSPVAG00000003444	-	76	92.877	Pteropus_vampyrus
ENSSSCG00000013063	-	84	59.016	ENSPNYG00000018764	tut1	51	53.030	Pundamilia_nyererei
ENSSSCG00000013063	-	100	77.871	ENSRNOG00000020047	Tut1	85	78.000	Rattus_norvegicus
ENSSSCG00000013063	-	99	88.951	ENSRBIG00000021240	-	86	88.815	Rhinopithecus_bieti
ENSSSCG00000013063	-	99	88.951	ENSRROG00000043315	-	90	88.815	Rhinopithecus_roxellana
ENSSSCG00000013063	-	99	88.467	ENSSBOG00000003827	-	90	88.220	Saimiri_boliviensis_boliviensis
ENSSSCG00000013063	-	99	65.315	ENSSHAG00000003368	-	88	65.779	Sarcophilus_harrisii
ENSSSCG00000013063	-	84	63.492	ENSSFOG00015005639	tut1	73	60.377	Scleropages_formosus
ENSSSCG00000013063	-	56	51.389	ENSSMAG00000011449	tut1	52	54.717	Scophthalmus_maximus
ENSSSCG00000013063	-	86	53.571	ENSSDUG00000003613	tut1	57	53.030	Seriola_dumerili
ENSSSCG00000013063	-	86	53.571	ENSSLDG00000022487	tut1	75	53.571	Seriola_lalandi_dorsalis
ENSSSCG00000013063	-	84	73.770	ENSSPUG00000008143	-	71	69.811	Sphenodon_punctatus
ENSSSCG00000013063	-	93	41.441	ENSTRUG00000016451	tut1	54	51.786	Takifugu_rubripes
ENSSSCG00000013063	-	67	42.259	ENSTNIG00000012852	tut1	73	42.324	Tetraodon_nigroviridis
ENSSSCG00000013063	-	100	85.393	ENSTTRG00000002460	-	86	84.893	Tursiops_truncatus
ENSSSCG00000013063	-	100	88.202	ENSUAMG00000027237	-	90	88.369	Ursus_americanus
ENSSSCG00000013063	-	100	88.202	ENSUMAG00000012710	-	90	88.369	Ursus_maritimus
ENSSSCG00000013063	-	73	87.934	ENSVPAG00000005413	-	87	87.934	Vicugna_pacos
ENSSSCG00000013063	-	100	86.415	ENSVVUG00000029882	-	90	87.067	Vulpes_vulpes
ENSSSCG00000013063	-	84	58.824	ENSXETG00000005640	tut1	84	35.006	Xenopus_tropicalis
ENSSSCG00000013063	-	92	52.055	ENSXMAG00000027272	tut1	78	55.357	Xiphophorus_maculatus