EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000013094 (Gene tree)
Gene ID: 100522239
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 29223 bases
Position: chr2:10171698-10200920
Accession: 100522239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000013928	CPSF_A	PF03178.15	1.5e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014314	DDB1-201	3393	XM_003122651	ENSSSCP00000013928	1130 (aa)	XP_003122699	F1RIE2

Gene Model

Click here to download ENSSSCG00000013094's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03420	Nucleotide excision repair	KEGG
ssc04120	Ubiquitin mediated proteolysis	KEGG
ssc05161	Hepatitis B	KEGG
ssc05170	Human immunodeficiency virus 1 infection	KEGG
ssc05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000013094	DDB1	100	98.860	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSSSCG00000013094	DDB1	98	90.476	ENSAPOG00000005036	ddb1	99	90.918	Acanthochromis_polyacanthus
ENSSSCG00000013094	DDB1	100	98.947	ENSAMEG00000016518	DDB1	100	98.947	Ailuropoda_melanoleuca
ENSSSCG00000013094	DDB1	86	91.224	ENSACIG00000020624	ddb1	99	91.224	Amphilophus_citrinellus
ENSSSCG00000013094	DDB1	100	90.175	ENSAOCG00000003066	ddb1	100	90.175	Amphiprion_ocellaris
ENSSSCG00000013094	DDB1	100	90.263	ENSAPEG00000000092	ddb1	100	90.263	Amphiprion_percula
ENSSSCG00000013094	DDB1	94	91.394	ENSATEG00000020571	ddb1	97	91.394	Anabas_testudineus
ENSSSCG00000013094	DDB1	98	95.733	ENSAPLG00000007174	DDB1	99	95.733	Anas_platyrhynchos
ENSSSCG00000013094	DDB1	100	96.053	ENSACAG00000017758	DDB1	100	96.053	Anolis_carolinensis
ENSSSCG00000013094	DDB1	100	98.860	ENSANAG00000021878	DDB1	100	98.860	Aotus_nancymaae
ENSSSCG00000013094	DDB1	100	90.526	ENSACLG00000012401	ddb1	100	90.526	Astatotilapia_calliptera
ENSSSCG00000013094	DDB1	100	98.860	ENSBTAG00000021569	DDB1	93	98.860	Bos_taurus
ENSSSCG00000013094	DDB1	100	36.698	WBGene00010890	ddb-1	100	36.612	Caenorhabditis_elegans
ENSSSCG00000013094	DDB1	100	98.860	ENSCJAG00000019319	DDB1	100	98.860	Callithrix_jacchus
ENSSSCG00000013094	DDB1	100	98.947	ENSCAFG00000016264	DDB1	100	98.947	Canis_familiaris
ENSSSCG00000013094	DDB1	95	98.520	ENSCAFG00020012722	DDB1	99	98.520	Canis_lupus_dingo
ENSSSCG00000013094	DDB1	100	98.860	ENSCHIG00000014969	DDB1	100	98.860	Capra_hircus
ENSSSCG00000013094	DDB1	100	98.158	ENSTSYG00000008027	DDB1	100	98.158	Carlito_syrichta
ENSSSCG00000013094	DDB1	98	98.123	ENSCAPG00000010786	DDB1	100	98.123	Cavia_aperea
ENSSSCG00000013094	DDB1	100	98.158	ENSCPOG00000009956	DDB1	100	98.158	Cavia_porcellus
ENSSSCG00000013094	DDB1	100	98.860	ENSCCAG00000035883	DDB1	100	98.860	Cebus_capucinus
ENSSSCG00000013094	DDB1	100	97.210	ENSCATG00000044495	DDB1	100	97.210	Cercocebus_atys
ENSSSCG00000013094	DDB1	100	98.246	ENSCLAG00000004126	DDB1	100	98.246	Chinchilla_lanigera
ENSSSCG00000013094	DDB1	100	98.860	ENSCSAG00000006392	DDB1	100	98.860	Chlorocebus_sabaeus
ENSSSCG00000013094	DDB1	87	90.909	ENSCHOG00000011377	DDB1	90	90.909	Choloepus_hoffmanni
ENSSSCG00000013094	DDB1	100	96.754	ENSCPBG00000017728	DDB1	100	96.754	Chrysemys_picta_bellii
ENSSSCG00000013094	DDB1	100	61.111	ENSCING00000007437	-	100	61.024	Ciona_intestinalis
ENSSSCG00000013094	DDB1	94	59.797	ENSCSAVG00000004783	-	100	59.810	Ciona_savignyi
ENSSSCG00000013094	DDB1	100	98.860	ENSCANG00000019948	DDB1	100	98.860	Colobus_angolensis_palliatus
ENSSSCG00000013094	DDB1	100	98.860	ENSCGRG00001016599	Ddb1	100	98.860	Cricetulus_griseus_chok1gshd
ENSSSCG00000013094	DDB1	100	98.860	ENSCGRG00000013427	Ddb1	100	98.860	Cricetulus_griseus_crigri
ENSSSCG00000013094	DDB1	93	90.669	ENSCSEG00000012499	ddb1	99	89.069	Cynoglossus_semilaevis
ENSSSCG00000013094	DDB1	94	91.020	ENSCVAG00000019531	ddb1	99	91.020	Cyprinodon_variegatus
ENSSSCG00000013094	DDB1	100	87.478	ENSDARG00000074431	ddb1	100	87.598	Danio_rerio
ENSSSCG00000013094	DDB1	94	98.971	ENSDNOG00000014884	DDB1	97	98.971	Dasypus_novemcinctus
ENSSSCG00000013094	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSSSCG00000013094	DDB1	100	60.437	FBgn0260962	pic	100	60.227	Drosophila_melanogaster
ENSSSCG00000013094	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSSSCG00000013094	DDB1	79	84.927	ENSEBUG00000014593	ddb1	97	84.927	Eptatretus_burgeri
ENSSSCG00000013094	DDB1	100	98.772	ENSEASG00005008184	DDB1	100	98.772	Equus_asinus_asinus
ENSSSCG00000013094	DDB1	100	98.684	ENSECAG00000012136	DDB1	100	98.684	Equus_caballus
ENSSSCG00000013094	DDB1	85	96.465	ENSEEUG00000003194	DDB1	85	96.465	Erinaceus_europaeus
ENSSSCG00000013094	DDB1	100	90.175	ENSELUG00000023868	ddb1	100	90.175	Esox_lucius
ENSSSCG00000013094	DDB1	100	98.947	ENSFCAG00000029716	DDB1	100	98.947	Felis_catus
ENSSSCG00000013094	DDB1	100	96.150	ENSFALG00000011981	DDB1	100	96.150	Ficedula_albicollis
ENSSSCG00000013094	DDB1	100	98.158	ENSFDAG00000005128	DDB1	100	98.158	Fukomys_damarensis
ENSSSCG00000013094	DDB1	90	90.400	ENSFHEG00000022133	ddb1	98	90.539	Fundulus_heteroclitus
ENSSSCG00000013094	DDB1	79	94.649	ENSGMOG00000019386	ddb1	93	94.649	Gadus_morhua
ENSSSCG00000013094	DDB1	100	96.228	ENSGALG00000042333	DDB1	100	96.228	Gallus_gallus
ENSSSCG00000013094	DDB1	94	90.833	ENSGAFG00000013142	ddb1	99	90.833	Gambusia_affinis
ENSSSCG00000013094	DDB1	96	89.826	ENSGACG00000017182	ddb1	100	89.826	Gasterosteus_aculeatus
ENSSSCG00000013094	DDB1	95	96.771	ENSGAGG00000014124	DDB1	100	96.771	Gopherus_agassizii
ENSSSCG00000013094	DDB1	100	98.860	ENSGGOG00000004052	DDB1	100	98.860	Gorilla_gorilla
ENSSSCG00000013094	DDB1	100	90.526	ENSHBUG00000008873	ddb1	100	90.526	Haplochromis_burtoni
ENSSSCG00000013094	DDB1	100	98.070	ENSHGLG00000018430	DDB1	100	98.070	Heterocephalus_glaber_female
ENSSSCG00000013094	DDB1	100	97.018	ENSHGLG00100014475	DDB1	100	97.018	Heterocephalus_glaber_male
ENSSSCG00000013094	DDB1	94	90.739	ENSHCOG00000018670	ddb1	98	90.739	Hippocampus_comes
ENSSSCG00000013094	DDB1	100	89.561	ENSIPUG00000005612	DDB1	100	89.561	Ictalurus_punctatus
ENSSSCG00000013094	DDB1	100	98.860	ENSSTOG00000007552	DDB1	100	98.860	Ictidomys_tridecemlineatus
ENSSSCG00000013094	DDB1	100	98.684	ENSJJAG00000017769	Ddb1	100	98.684	Jaculus_jaculus
ENSSSCG00000013094	DDB1	94	90.926	ENSKMAG00000002315	ddb1	99	90.926	Kryptolebias_marmoratus
ENSSSCG00000013094	DDB1	85	90.881	ENSLBEG00000017065	ddb1	99	90.881	Labrus_bergylta
ENSSSCG00000013094	DDB1	100	92.644	ENSLACG00000017611	DDB1	100	92.644	Latimeria_chalumnae
ENSSSCG00000013094	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSSSCG00000013094	DDB1	100	98.684	ENSLAFG00000011513	DDB1	100	98.684	Loxodonta_africana
ENSSSCG00000013094	DDB1	100	98.860	ENSMFAG00000042035	DDB1	100	98.860	Macaca_fascicularis
ENSSSCG00000013094	DDB1	99	98.851	ENSMMUG00000002691	DDB1	99	98.851	Macaca_mulatta
ENSSSCG00000013094	DDB1	100	98.860	ENSMNEG00000031559	DDB1	100	98.860	Macaca_nemestrina
ENSSSCG00000013094	DDB1	100	98.860	ENSMLEG00000044136	DDB1	100	98.860	Mandrillus_leucophaeus
ENSSSCG00000013094	DDB1	100	90.526	ENSMAMG00000014372	ddb1	100	90.526	Mastacembelus_armatus
ENSSSCG00000013094	DDB1	100	90.526	ENSMZEG00005013835	ddb1	100	90.526	Maylandia_zebra
ENSSSCG00000013094	DDB1	94	95.624	ENSMGAG00000004990	DDB1	100	95.624	Meleagris_gallopavo
ENSSSCG00000013094	DDB1	100	98.860	ENSMAUG00000012926	Ddb1	100	98.860	Mesocricetus_auratus
ENSSSCG00000013094	DDB1	100	98.860	ENSMICG00000013703	DDB1	100	98.860	Microcebus_murinus
ENSSSCG00000013094	DDB1	100	98.596	ENSMOCG00000020499	Ddb1	100	98.596	Microtus_ochrogaster
ENSSSCG00000013094	DDB1	86	91.224	ENSMMOG00000001758	ddb1	99	91.224	Mola_mola
ENSSSCG00000013094	DDB1	100	88.322	ENSMODG00000020353	DDB1	100	88.322	Monodelphis_domestica
ENSSSCG00000013094	DDB1	100	90.526	ENSMALG00000014071	ddb1	100	90.526	Monopterus_albus
ENSSSCG00000013094	DDB1	100	98.772	MGP_CAROLIEiJ_G0022695	Ddb1	100	98.772	Mus_caroli
ENSSSCG00000013094	DDB1	100	98.684	ENSMUSG00000024740	Ddb1	100	98.684	Mus_musculus
ENSSSCG00000013094	DDB1	100	98.772	MGP_PahariEiJ_G0014189	Ddb1	100	98.772	Mus_pahari
ENSSSCG00000013094	DDB1	100	98.772	MGP_SPRETEiJ_G0023609	Ddb1	100	98.772	Mus_spretus
ENSSSCG00000013094	DDB1	100	95.614	ENSMPUG00000014200	DDB1	100	95.614	Mustela_putorius_furo
ENSSSCG00000013094	DDB1	100	98.333	ENSMLUG00000013232	DDB1	100	98.333	Myotis_lucifugus
ENSSSCG00000013094	DDB1	100	98.421	ENSNGAG00000009384	Ddb1	100	98.421	Nannospalax_galili
ENSSSCG00000013094	DDB1	100	90.614	ENSNBRG00000019581	ddb1	100	90.614	Neolamprologus_brichardi
ENSSSCG00000013094	DDB1	100	96.600	ENSNLEG00000002022	DDB1	100	96.600	Nomascus_leucogenys
ENSSSCG00000013094	DDB1	91	96.127	ENSMEUG00000001099	DDB1	93	96.127	Notamacropus_eugenii
ENSSSCG00000013094	DDB1	90	90.107	ENSOPRG00000008254	DDB1	90	90.107	Ochotona_princeps
ENSSSCG00000013094	DDB1	100	98.070	ENSODEG00000002419	DDB1	100	98.070	Octodon_degus
ENSSSCG00000013094	DDB1	100	90.526	ENSONIG00000005804	ddb1	100	90.526	Oreochromis_niloticus
ENSSSCG00000013094	DDB1	90	96.996	ENSOANG00000004897	DDB1	100	96.996	Ornithorhynchus_anatinus
ENSSSCG00000013094	DDB1	100	98.947	ENSOCUG00000001667	DDB1	100	98.947	Oryctolagus_cuniculus
ENSSSCG00000013094	DDB1	94	90.645	ENSORLG00000001399	ddb1	98	90.586	Oryzias_latipes
ENSSSCG00000013094	DDB1	94	90.552	ENSORLG00020001277	ddb1	95	90.552	Oryzias_latipes_hni
ENSSSCG00000013094	DDB1	94	90.645	ENSORLG00015002080	ddb1	98	90.645	Oryzias_latipes_hsok
ENSSSCG00000013094	DDB1	94	91.113	ENSOMEG00000006181	ddb1	97	91.113	Oryzias_melastigma
ENSSSCG00000013094	DDB1	100	98.684	ENSOGAG00000016103	DDB1	100	98.684	Otolemur_garnettii
ENSSSCG00000013094	DDB1	98	98.842	ENSOARG00000011716	DDB1	98	98.842	Ovis_aries
ENSSSCG00000013094	DDB1	100	98.860	ENSPPAG00000035343	DDB1	100	98.860	Pan_paniscus
ENSSSCG00000013094	DDB1	100	98.947	ENSPPRG00000013300	DDB1	100	98.947	Panthera_pardus
ENSSSCG00000013094	DDB1	98	98.928	ENSPTIG00000006909	DDB1	98	98.928	Panthera_tigris_altaica
ENSSSCG00000013094	DDB1	100	98.860	ENSPTRG00000003737	DDB1	100	98.860	Pan_troglodytes
ENSSSCG00000013094	DDB1	100	98.860	ENSPANG00000000242	DDB1	100	98.860	Papio_anubis
ENSSSCG00000013094	DDB1	94	90.926	ENSPKIG00000019213	ddb1	94	90.926	Paramormyrops_kingsleyae
ENSSSCG00000013094	DDB1	98	96.085	ENSPSIG00000013275	DDB1	100	96.085	Pelodiscus_sinensis
ENSSSCG00000013094	DDB1	86	90.918	ENSPMGG00000021179	ddb1	99	90.918	Periophthalmus_magnuspinnatus
ENSSSCG00000013094	DDB1	100	98.860	ENSPEMG00000012241	Ddb1	100	98.860	Peromyscus_maniculatus_bairdii
ENSSSCG00000013094	DDB1	90	86.248	ENSPMAG00000008479	ddb1	100	86.248	Petromyzon_marinus
ENSSSCG00000013094	DDB1	100	97.982	ENSPCIG00000002643	DDB1	100	97.982	Phascolarctos_cinereus
ENSSSCG00000013094	DDB1	100	90.009	ENSPFOG00000002768	ddb1	100	90.009	Poecilia_formosa
ENSSSCG00000013094	DDB1	100	90.079	ENSPLAG00000017227	ddb1	100	90.079	Poecilia_latipinna
ENSSSCG00000013094	DDB1	100	90.079	ENSPMEG00000011398	ddb1	100	90.079	Poecilia_mexicana
ENSSSCG00000013094	DDB1	94	91.020	ENSPREG00000004440	ddb1	97	91.020	Poecilia_reticulata
ENSSSCG00000013094	DDB1	100	93.979	ENSPPYG00000003193	DDB1	100	93.979	Pongo_abelii
ENSSSCG00000013094	DDB1	85	97.761	ENSPCAG00000011040	DDB1	85	97.761	Procavia_capensis
ENSSSCG00000013094	DDB1	100	97.548	ENSPCOG00000015176	DDB1	100	97.548	Propithecus_coquereli
ENSSSCG00000013094	DDB1	100	98.772	ENSPVAG00000003847	DDB1	100	98.772	Pteropus_vampyrus
ENSSSCG00000013094	DDB1	94	90.926	ENSPNAG00000006635	ddb1	97	90.926	Pygocentrus_nattereri
ENSSSCG00000013094	DDB1	100	98.772	ENSRNOG00000020715	Ddb1	100	98.772	Rattus_norvegicus
ENSSSCG00000013094	DDB1	100	98.860	ENSRBIG00000033611	DDB1	100	98.860	Rhinopithecus_bieti
ENSSSCG00000013094	DDB1	100	98.860	ENSRROG00000041407	DDB1	100	98.860	Rhinopithecus_roxellana
ENSSSCG00000013094	DDB1	100	98.772	ENSSBOG00000019775	DDB1	100	98.772	Saimiri_boliviensis_boliviensis
ENSSSCG00000013094	DDB1	94	95.888	ENSSHAG00000011600	DDB1	100	95.888	Sarcophilus_harrisii
ENSSSCG00000013094	DDB1	94	91.207	ENSSFOG00015011151	ddb1	96	91.207	Scleropages_formosus
ENSSSCG00000013094	DDB1	100	90.088	ENSSMAG00000009495	ddb1	100	90.088	Scophthalmus_maximus
ENSSSCG00000013094	DDB1	100	90.439	ENSSDUG00000004642	ddb1	100	90.439	Seriola_dumerili
ENSSSCG00000013094	DDB1	100	90.439	ENSSLDG00000015804	ddb1	100	90.439	Seriola_lalandi_dorsalis
ENSSSCG00000013094	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSSSCG00000013094	DDB1	100	96.930	ENSSPUG00000019338	DDB1	100	96.930	Sphenodon_punctatus
ENSSSCG00000013094	DDB1	94	91.300	ENSSPAG00000009888	ddb1	99	91.300	Stegastes_partitus
ENSSSCG00000013094	DDB1	100	96.491	ENSTGUG00000006414	DDB1	100	96.491	Taeniopygia_guttata
ENSSSCG00000013094	DDB1	94	89.897	ENSTRUG00000016682	ddb1	98	89.897	Takifugu_rubripes
ENSSSCG00000013094	DDB1	88	84.032	ENSTNIG00000009565	ddb1	99	84.032	Tetraodon_nigroviridis
ENSSSCG00000013094	DDB1	92	93.725	ENSTTRG00000011055	DDB1	94	93.725	Tursiops_truncatus
ENSSSCG00000013094	DDB1	95	98.520	ENSUAMG00000017793	DDB1	94	98.520	Ursus_americanus
ENSSSCG00000013094	DDB1	95	98.520	ENSUMAG00000011788	DDB1	98	98.520	Ursus_maritimus
ENSSSCG00000013094	DDB1	90	95.098	ENSVPAG00000007963	DDB1	92	95.098	Vicugna_pacos
ENSSSCG00000013094	DDB1	100	98.860	ENSVVUG00000004987	DDB1	100	98.860	Vulpes_vulpes
ENSSSCG00000013094	DDB1	100	92.308	ENSXETG00000008820	ddb1	100	92.308	Xenopus_tropicalis
ENSSSCG00000013094	DDB1	86	90.714	ENSXCOG00000013956	ddb1	99	90.714	Xiphophorus_couchianus
ENSSSCG00000013094	DDB1	94	90.833	ENSXMAG00000000022	ddb1	99	90.833	Xiphophorus_maculatus