EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000013107 (Gene tree)
Gene ID: 100144769
Gene Symbol: PRPF19
Alias: nmp-200
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 12078 bases
Position: chr2:10851066-10863143
Accession: 100144769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000013941	Prp19	PF08606.11	8.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014327	-	5116	-	ENSSSCP00000013941	504 (aa)	-	B2CCY7

Gene Model

Click here to download ENSSSCG00000013107's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG
ssc04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013107's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000013107	PRPF19	100	99.603	ENSG00000110107	PRPF19	100	100.000	Homo_sapiens
ENSSSCG00000013107	PRPF19	100	85.743	ENSAPOG00000017823	prpf19	100	85.743	Acanthochromis_polyacanthus
ENSSSCG00000013107	PRPF19	100	99.396	ENSAMEG00000007375	PRPF19	99	99.396	Ailuropoda_melanoleuca
ENSSSCG00000013107	PRPF19	99	84.493	ENSACIG00000015876	prpf19	99	84.493	Amphilophus_citrinellus
ENSSSCG00000013107	PRPF19	100	85.743	ENSAOCG00000020444	prpf19	100	85.743	Amphiprion_ocellaris
ENSSSCG00000013107	PRPF19	100	85.743	ENSAPEG00000016076	prpf19	100	85.743	Amphiprion_percula
ENSSSCG00000013107	PRPF19	100	85.743	ENSATEG00000008840	prpf19	100	85.743	Anabas_testudineus
ENSSSCG00000013107	PRPF19	100	97.421	ENSACAG00000017797	PRPF19	100	97.421	Anolis_carolinensis
ENSSSCG00000013107	PRPF19	100	99.206	ENSANAG00000021762	PRPF19	100	99.206	Aotus_nancymaae
ENSSSCG00000013107	PRPF19	100	84.752	ENSACLG00000009416	prpf19	100	84.752	Astatotilapia_calliptera
ENSSSCG00000013107	PRPF19	100	85.545	ENSAMXG00000011547	prpf19	100	85.545	Astyanax_mexicanus
ENSSSCG00000013107	PRPF19	100	99.802	ENSBTAG00000014366	PRPF19	100	99.802	Bos_taurus
ENSSSCG00000013107	PRPF19	100	51.581	WBGene00020423	prp-19	100	51.581	Caenorhabditis_elegans
ENSSSCG00000013107	PRPF19	100	99.405	ENSCJAG00000016509	PRPF19	100	99.405	Callithrix_jacchus
ENSSSCG00000013107	PRPF19	100	99.405	ENSCAFG00000016438	PRPF19	98	99.405	Canis_familiaris
ENSSSCG00000013107	PRPF19	100	99.405	ENSCAFG00020012565	PRPF19	100	99.405	Canis_lupus_dingo
ENSSSCG00000013107	PRPF19	100	99.802	ENSCHIG00000018281	PRPF19	100	99.802	Capra_hircus
ENSSSCG00000013107	PRPF19	99	98.795	ENSTSYG00000006860	PRPF19	99	98.795	Carlito_syrichta
ENSSSCG00000013107	PRPF19	99	98.998	ENSCAPG00000016225	PRPF19	100	98.998	Cavia_aperea
ENSSSCG00000013107	PRPF19	100	99.405	ENSCPOG00000020688	PRPF19	100	99.405	Cavia_porcellus
ENSSSCG00000013107	PRPF19	100	99.405	ENSCCAG00000025839	PRPF19	100	99.405	Cebus_capucinus
ENSSSCG00000013107	PRPF19	100	99.603	ENSCATG00000041921	PRPF19	100	99.603	Cercocebus_atys
ENSSSCG00000013107	PRPF19	99	99.396	ENSCLAG00000003338	PRPF19	100	99.396	Chinchilla_lanigera
ENSSSCG00000013107	PRPF19	100	99.603	ENSCSAG00000006254	PRPF19	100	99.603	Chlorocebus_sabaeus
ENSSSCG00000013107	PRPF19	62	87.781	ENSCHOG00000005840	PRPF19	100	87.781	Choloepus_hoffmanni
ENSSSCG00000013107	PRPF19	100	97.669	ENSCPBG00000027061	PRPF19	100	97.619	Chrysemys_picta_bellii
ENSSSCG00000013107	PRPF19	87	68.119	ENSCING00000016625	-	99	68.119	Ciona_intestinalis
ENSSSCG00000013107	PRPF19	100	68.452	ENSCSAVG00000002027	-	99	68.452	Ciona_savignyi
ENSSSCG00000013107	PRPF19	99	98.693	ENSCANG00000027155	PRPF19	99	46.065	Colobus_angolensis_palliatus
ENSSSCG00000013107	PRPF19	100	99.405	ENSCGRG00001002699	Prpf19	100	99.405	Cricetulus_griseus_chok1gshd
ENSSSCG00000013107	PRPF19	100	98.413	ENSCGRG00000008964	Prpf19	100	98.413	Cricetulus_griseus_crigri
ENSSSCG00000013107	PRPF19	100	84.752	ENSCSEG00000010411	prpf19	100	84.752	Cynoglossus_semilaevis
ENSSSCG00000013107	PRPF19	100	84.554	ENSCVAG00000012011	prpf19	100	84.554	Cyprinodon_variegatus
ENSSSCG00000013107	PRPF19	100	85.149	ENSDARG00000015239	prpf19	100	85.149	Danio_rerio
ENSSSCG00000013107	PRPF19	100	99.576	ENSDNOG00000005797	PRPF19	100	99.405	Dasypus_novemcinctus
ENSSSCG00000013107	PRPF19	100	99.405	ENSDORG00000006906	Prpf19	100	99.405	Dipodomys_ordii
ENSSSCG00000013107	PRPF19	100	65.490	FBgn0261119	Prp19	99	65.490	Drosophila_melanogaster
ENSSSCG00000013107	PRPF19	100	86.508	ENSETEG00000012295	PRPF19	100	86.508	Echinops_telfairi
ENSSSCG00000013107	PRPF19	83	76.667	ENSEBUG00000013075	prpf19	100	76.667	Eptatretus_burgeri
ENSSSCG00000013107	PRPF19	100	99.370	ENSEASG00005008056	PRPF19	98	99.370	Equus_asinus_asinus
ENSSSCG00000013107	PRPF19	100	99.603	ENSECAG00000007322	PRPF19	100	99.603	Equus_caballus
ENSSSCG00000013107	PRPF19	100	84.752	ENSELUG00000020276	-	100	84.752	Esox_lucius
ENSSSCG00000013107	PRPF19	100	78.373	ENSELUG00000004578	prpf19	100	78.373	Esox_lucius
ENSSSCG00000013107	PRPF19	100	99.405	ENSFCAG00000013668	PRPF19	100	99.405	Felis_catus
ENSSSCG00000013107	PRPF19	100	97.222	ENSFALG00000012084	PRPF19	100	97.222	Ficedula_albicollis
ENSSSCG00000013107	PRPF19	84	99.052	ENSFDAG00000009420	PRPF19	96	99.052	Fukomys_damarensis
ENSSSCG00000013107	PRPF19	100	84.554	ENSFHEG00000022135	prpf19	100	84.554	Fundulus_heteroclitus
ENSSSCG00000013107	PRPF19	100	85.941	ENSGMOG00000014756	prpf19	100	85.941	Gadus_morhua
ENSSSCG00000013107	PRPF19	100	97.222	ENSGALG00000036530	PRPF19	100	97.222	Gallus_gallus
ENSSSCG00000013107	PRPF19	100	83.960	ENSGAFG00000008931	prpf19	100	83.960	Gambusia_affinis
ENSSSCG00000013107	PRPF19	100	84.752	ENSGACG00000017976	prpf19	100	84.752	Gasterosteus_aculeatus
ENSSSCG00000013107	PRPF19	100	97.817	ENSGAGG00000013328	PRPF19	100	97.817	Gopherus_agassizii
ENSSSCG00000013107	PRPF19	100	99.603	ENSGGOG00000008648	PRPF19	100	99.603	Gorilla_gorilla
ENSSSCG00000013107	PRPF19	100	84.752	ENSHBUG00000008394	prpf19	100	84.752	Haplochromis_burtoni
ENSSSCG00000013107	PRPF19	100	99.008	ENSHGLG00000003934	PRPF19	100	99.008	Heterocephalus_glaber_female
ENSSSCG00000013107	PRPF19	99	80.668	ENSHGLG00100010649	PRPF19	100	80.282	Heterocephalus_glaber_male
ENSSSCG00000013107	PRPF19	100	83.564	ENSHCOG00000016720	prpf19	100	83.564	Hippocampus_comes
ENSSSCG00000013107	PRPF19	100	85.545	ENSIPUG00000013084	prpf19	100	85.545	Ictalurus_punctatus
ENSSSCG00000013107	PRPF19	100	99.008	ENSSTOG00000001598	PRPF19	100	99.008	Ictidomys_tridecemlineatus
ENSSSCG00000013107	PRPF19	100	99.405	ENSJJAG00000020609	Prpf19	100	99.405	Jaculus_jaculus
ENSSSCG00000013107	PRPF19	100	84.950	ENSKMAG00000010257	prpf19	100	84.950	Kryptolebias_marmoratus
ENSSSCG00000013107	PRPF19	100	85.149	ENSLBEG00000027436	prpf19	100	85.149	Labrus_bergylta
ENSSSCG00000013107	PRPF19	100	89.683	ENSLACG00000003434	PRPF19	100	89.683	Latimeria_chalumnae
ENSSSCG00000013107	PRPF19	91	73.987	ENSLOCG00000008123	prpf19	100	73.987	Lepisosteus_oculatus
ENSSSCG00000013107	PRPF19	100	95.969	ENSLAFG00000002644	PRPF19	100	95.969	Loxodonta_africana
ENSSSCG00000013107	PRPF19	100	99.603	ENSMFAG00000036743	PRPF19	100	99.603	Macaca_fascicularis
ENSSSCG00000013107	PRPF19	100	99.603	ENSMMUG00000014530	PRPF19	100	99.603	Macaca_mulatta
ENSSSCG00000013107	PRPF19	100	99.603	ENSMNEG00000044485	PRPF19	100	99.603	Macaca_nemestrina
ENSSSCG00000013107	PRPF19	100	99.603	ENSMLEG00000043312	PRPF19	100	99.603	Mandrillus_leucophaeus
ENSSSCG00000013107	PRPF19	100	85.149	ENSMAMG00000006843	prpf19	100	85.149	Mastacembelus_armatus
ENSSSCG00000013107	PRPF19	100	84.752	ENSMZEG00005013356	prpf19	100	84.752	Maylandia_zebra
ENSSSCG00000013107	PRPF19	98	90.581	ENSMGAG00000003180	PRPF19	100	90.581	Meleagris_gallopavo
ENSSSCG00000013107	PRPF19	100	98.611	ENSMAUG00000012585	Prpf19	100	98.611	Mesocricetus_auratus
ENSSSCG00000013107	PRPF19	100	99.603	ENSMICG00000011236	PRPF19	100	99.603	Microcebus_murinus
ENSSSCG00000013107	PRPF19	100	99.405	ENSMOCG00000010383	Prpf19	100	99.405	Microtus_ochrogaster
ENSSSCG00000013107	PRPF19	100	84.722	ENSMMOG00000003138	prpf19	100	84.722	Mola_mola
ENSSSCG00000013107	PRPF19	100	99.206	ENSMODG00000020338	PRPF19	100	99.206	Monodelphis_domestica
ENSSSCG00000013107	PRPF19	99	76.608	ENSMALG00000010981	prpf19	99	76.608	Monopterus_albus
ENSSSCG00000013107	PRPF19	100	99.405	MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	Mus_caroli
ENSSSCG00000013107	PRPF19	100	99.405	ENSMUSG00000024735	Prpf19	100	99.405	Mus_musculus
ENSSSCG00000013107	PRPF19	100	99.405	MGP_PahariEiJ_G0014198	Prpf19	100	99.405	Mus_pahari
ENSSSCG00000013107	PRPF19	100	99.405	MGP_SPRETEiJ_G0023618	Prpf19	100	99.405	Mus_spretus
ENSSSCG00000013107	PRPF19	100	99.405	ENSMPUG00000014432	PRPF19	100	99.405	Mustela_putorius_furo
ENSSSCG00000013107	PRPF19	100	94.990	ENSMLUG00000017597	PRPF19	100	94.990	Myotis_lucifugus
ENSSSCG00000013107	PRPF19	100	98.810	ENSNGAG00000012671	Prpf19	100	98.810	Nannospalax_galili
ENSSSCG00000013107	PRPF19	100	84.752	ENSNBRG00000000055	prpf19	100	84.752	Neolamprologus_brichardi
ENSSSCG00000013107	PRPF19	100	99.603	ENSNLEG00000013618	PRPF19	100	99.603	Nomascus_leucogenys
ENSSSCG00000013107	PRPF19	99	95.573	ENSOPRG00000008630	PRPF19	100	95.573	Ochotona_princeps
ENSSSCG00000013107	PRPF19	100	98.810	ENSODEG00000004043	PRPF19	100	98.810	Octodon_degus
ENSSSCG00000013107	PRPF19	100	84.752	ENSONIG00000004880	prpf19	100	84.752	Oreochromis_niloticus
ENSSSCG00000013107	PRPF19	100	95.619	ENSOCUG00000015689	PRPF19	100	95.619	Oryctolagus_cuniculus
ENSSSCG00000013107	PRPF19	100	84.752	ENSORLG00000004666	prpf19	100	84.752	Oryzias_latipes
ENSSSCG00000013107	PRPF19	100	84.752	ENSORLG00020013561	prpf19	100	84.752	Oryzias_latipes_hni
ENSSSCG00000013107	PRPF19	100	84.752	ENSORLG00015022196	prpf19	100	84.752	Oryzias_latipes_hsok
ENSSSCG00000013107	PRPF19	100	83.960	ENSOMEG00000004424	prpf19	100	83.960	Oryzias_melastigma
ENSSSCG00000013107	PRPF19	100	99.405	ENSOGAG00000016756	PRPF19	100	99.405	Otolemur_garnettii
ENSSSCG00000013107	PRPF19	100	99.802	ENSOARG00000015596	PRPF19	100	99.802	Ovis_aries
ENSSSCG00000013107	PRPF19	99	97.053	ENSPPAG00000030246	PRPF19	100	97.053	Pan_paniscus
ENSSSCG00000013107	PRPF19	100	99.405	ENSPPRG00000002470	PRPF19	100	99.405	Panthera_pardus
ENSSSCG00000013107	PRPF19	99	99.396	ENSPTIG00000006541	PRPF19	99	99.396	Panthera_tigris_altaica
ENSSSCG00000013107	PRPF19	100	99.603	ENSPTRG00000003724	PRPF19	100	99.603	Pan_troglodytes
ENSSSCG00000013107	PRPF19	100	99.603	ENSPANG00000002762	PRPF19	100	99.603	Papio_anubis
ENSSSCG00000013107	PRPF19	100	84.752	ENSPKIG00000019715	prpf19	100	84.752	Paramormyrops_kingsleyae
ENSSSCG00000013107	PRPF19	83	97.375	ENSPSIG00000007497	PRPF19	100	97.375	Pelodiscus_sinensis
ENSSSCG00000013107	PRPF19	100	84.722	ENSPMGG00000017527	prpf19	100	84.722	Periophthalmus_magnuspinnatus
ENSSSCG00000013107	PRPF19	54	31.111	ENSPMGG00000006948	wdr36	54	31.111	Periophthalmus_magnuspinnatus
ENSSSCG00000013107	PRPF19	100	98.214	ENSPEMG00000019270	Prpf19	100	98.214	Peromyscus_maniculatus_bairdii
ENSSSCG00000013107	PRPF19	99	98.929	ENSPCIG00000003485	PRPF19	79	98.929	Phascolarctos_cinereus
ENSSSCG00000013107	PRPF19	100	83.960	ENSPFOG00000002558	prpf19	100	83.960	Poecilia_formosa
ENSSSCG00000013107	PRPF19	100	83.960	ENSPLAG00000017942	prpf19	100	83.960	Poecilia_latipinna
ENSSSCG00000013107	PRPF19	100	83.960	ENSPMEG00000008638	prpf19	100	83.960	Poecilia_mexicana
ENSSSCG00000013107	PRPF19	100	86.364	ENSPREG00000002489	prpf19	96	86.364	Poecilia_reticulata
ENSSSCG00000013107	PRPF19	100	98.144	ENSPPYG00000003202	PRPF19	92	98.144	Pongo_abelii
ENSSSCG00000013107	PRPF19	100	99.008	ENSPCAG00000001930	PRPF19	100	99.008	Procavia_capensis
ENSSSCG00000013107	PRPF19	100	99.788	ENSPCOG00000014017	PRPF19	100	99.788	Propithecus_coquereli
ENSSSCG00000013107	PRPF19	100	99.603	ENSPVAG00000014669	PRPF19	100	99.603	Pteropus_vampyrus
ENSSSCG00000013107	PRPF19	100	84.752	ENSPNYG00000000859	prpf19	100	84.752	Pundamilia_nyererei
ENSSSCG00000013107	PRPF19	100	85.941	ENSPNAG00000019245	prpf19	100	85.941	Pygocentrus_nattereri
ENSSSCG00000013107	PRPF19	100	99.405	ENSRNOG00000020897	Prpf19	100	99.405	Rattus_norvegicus
ENSSSCG00000013107	PRPF19	100	99.603	ENSRBIG00000036672	PRPF19	100	99.603	Rhinopithecus_bieti
ENSSSCG00000013107	PRPF19	100	99.603	ENSRROG00000041572	PRPF19	100	99.603	Rhinopithecus_roxellana
ENSSSCG00000013107	PRPF19	100	99.405	ENSSBOG00000022840	PRPF19	100	99.405	Saimiri_boliviensis_boliviensis
ENSSSCG00000013107	PRPF19	100	99.206	ENSSHAG00000009462	PRPF19	100	99.206	Sarcophilus_harrisii
ENSSSCG00000013107	PRPF19	100	82.937	ENSSFOG00015001236	prpf19	100	82.937	Scleropages_formosus
ENSSSCG00000013107	PRPF19	100	85.545	ENSSMAG00000002273	prpf19	100	85.545	Scophthalmus_maximus
ENSSSCG00000013107	PRPF19	100	85.347	ENSSDUG00000003299	prpf19	100	85.347	Seriola_dumerili
ENSSSCG00000013107	PRPF19	100	85.347	ENSSLDG00000003019	prpf19	100	85.347	Seriola_lalandi_dorsalis
ENSSSCG00000013107	PRPF19	100	97.024	ENSSPUG00000019328	PRPF19	100	97.024	Sphenodon_punctatus
ENSSSCG00000013107	PRPF19	100	85.545	ENSSPAG00000008546	prpf19	100	85.545	Stegastes_partitus
ENSSSCG00000013107	PRPF19	100	97.222	ENSTGUG00000006319	PRPF19	100	97.222	Taeniopygia_guttata
ENSSSCG00000013107	PRPF19	100	84.158	ENSTRUG00000008502	prpf19	100	84.158	Takifugu_rubripes
ENSSSCG00000013107	PRPF19	100	67.723	ENSTNIG00000014219	prpf19	100	67.723	Tetraodon_nigroviridis
ENSSSCG00000013107	PRPF19	100	99.405	ENSTTRG00000012476	PRPF19	100	99.405	Tursiops_truncatus
ENSSSCG00000013107	PRPF19	100	99.405	ENSUAMG00000011280	PRPF19	100	99.405	Ursus_americanus
ENSSSCG00000013107	PRPF19	84	99.052	ENSUMAG00000011609	PRPF19	83	99.052	Ursus_maritimus
ENSSSCG00000013107	PRPF19	99	99.339	ENSVPAG00000010516	PRPF19	100	99.339	Vicugna_pacos
ENSSSCG00000013107	PRPF19	100	99.405	ENSVVUG00000005291	PRPF19	100	99.405	Vulpes_vulpes
ENSSSCG00000013107	PRPF19	100	85.649	ENSXETG00000011938	prpf19	100	85.649	Xenopus_tropicalis
ENSSSCG00000013107	PRPF19	100	83.960	ENSXCOG00000003141	prpf19	100	83.960	Xiphophorus_couchianus
ENSSSCG00000013107	PRPF19	100	84.158	ENSXMAG00000008485	prpf19	100	84.158	Xiphophorus_maculatus