EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000013233 (Gene tree)
Gene ID: 100514512
Gene Symbol: CELF1
Alias: BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50
Full Name: CUGBP Elav-like family member 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 87871 bases
Position: chr2:15066520-15154390
Accession: 100514512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000041277	RRM_1	PF00076.22	3.3e-52	1	3
ENSSSCP00000041277	RRM_1	PF00076.22	3.3e-52	2	3
ENSSSCP00000041277	RRM_1	PF00076.22	3.3e-52	3	3
ENSSSCP00000051386	RRM_1	PF00076.22	3.3e-52	1	3
ENSSSCP00000051386	RRM_1	PF00076.22	3.3e-52	2	3
ENSSSCP00000051386	RRM_1	PF00076.22	3.3e-52	3	3
ENSSSCP00000054390	RRM_1	PF00076.22	3.3e-52	1	3
ENSSSCP00000054390	RRM_1	PF00076.22	3.3e-52	2	3
ENSSSCP00000054390	RRM_1	PF00076.22	3.3e-52	3	3
ENSSSCP00000035849	RRM_1	PF00076.22	4.2e-52	1	3
ENSSSCP00000035849	RRM_1	PF00076.22	4.2e-52	2	3
ENSSSCP00000035849	RRM_1	PF00076.22	4.2e-52	3	3
ENSSSCP00000035897	RRM_1	PF00076.22	4.2e-52	1	3
ENSSSCP00000035897	RRM_1	PF00076.22	4.2e-52	2	3
ENSSSCP00000035897	RRM_1	PF00076.22	4.2e-52	3	3
ENSSSCP00000038729	RRM_1	PF00076.22	4.2e-52	1	3
ENSSSCP00000038729	RRM_1	PF00076.22	4.2e-52	2	3
ENSSSCP00000038729	RRM_1	PF00076.22	4.2e-52	3	3
ENSSSCP00000039934	RRM_1	PF00076.22	4.2e-52	1	3
ENSSSCP00000039934	RRM_1	PF00076.22	4.2e-52	2	3
ENSSSCP00000039934	RRM_1	PF00076.22	4.2e-52	3	3
ENSSSCP00000055625	RRM_1	PF00076.22	4.2e-52	1	3
ENSSSCP00000055625	RRM_1	PF00076.22	4.2e-52	2	3
ENSSSCP00000055625	RRM_1	PF00076.22	4.2e-52	3	3
ENSSSCP00000014061	RRM_1	PF00076.22	4.3e-52	1	3
ENSSSCP00000014061	RRM_1	PF00076.22	4.3e-52	2	3
ENSSSCP00000014061	RRM_1	PF00076.22	4.3e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000036890	CELF1-207	4687	XM_021083089	ENSSSCP00000035849	513 (aa)	XP_020938748	A0A286ZW77
ENSSSCT00000053550	CELF1-209	6592	XM_021083077	ENSSSCP00000055625	513 (aa)	XP_020938736	A0A286ZW77
ENSSSCT00000014453	CELF1-208	1593	-	ENSSSCP00000014061	517 (aa)	-	F1SID9
ENSSSCT00000049636	CELF1-205	3782	XM_021083078	ENSSSCP00000035897	513 (aa)	XP_020938737	A0A286ZW77
ENSSSCT00000053247	CELF1-203	3700	XM_021083080	ENSSSCP00000038729	513 (aa)	XP_020938739	A0A286ZW77
ENSSSCT00000047694	CELF1-204	4832	XM_021083076	ENSSSCP00000039934	513 (aa)	XP_020938735	A0A286ZW77
ENSSSCT00000039348	CELF1-201	4657	XM_021083100	ENSSSCP00000041277	486 (aa)	XP_020938759	A0A287ABC7
ENSSSCT00000038870	CELF1-206	3569	XM_021083104	ENSSSCP00000051386	486 (aa)	XP_020938763	A0A287ABC7
ENSSSCT00000044038	CELF1-202	4034	XM_021083101	ENSSSCP00000054390	486 (aa)	XP_020938760	A0A287ABC7

Gene Model

Click here to download ENSSSCG00000013233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000013233	CELF1	56	43.590	ENSSSCG00000013617	ELAVL3	71	42.391
ENSSSCG00000013233	CELF1	100	42.424	ENSSSCG00000003748	CELF4	64	78.571
ENSSSCG00000013233	CELF1	69	41.975	ENSSSCG00000005130	ELAVL2	79	41.975
ENSSSCG00000013233	CELF1	71	38.158	ENSSSCG00000000402	RBMS2	53	38.158
ENSSSCG00000013233	CELF1	55	45.679	ENSSSCG00000013592	ELAVL1	81	45.679
ENSSSCG00000013233	CELF1	100	78.208	ENSSSCG00000011121	-	100	79.022
ENSSSCG00000013233	CELF1	84	31.731	ENSSSCG00000037291	ELAVL4	76	40.741
ENSSSCG00000013233	CELF1	98	43.967	ENSSSCG00000013476	CELF5	66	60.563
ENSSSCG00000013233	CELF1	97	43.838	ENSSSCG00000006618	CELF3	99	44.043
ENSSSCG00000013233	CELF1	66	37.209	ENSSSCG00000007382	PABPC1L	54	32.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000013233	CELF1	100	99.588	ENSG00000149187	CELF1	100	100.000	Homo_sapiens
ENSSSCG00000013233	CELF1	100	84.178	ENSAPOG00000024000	celf1	100	85.193	Acanthochromis_polyacanthus
ENSSSCG00000013233	CELF1	100	99.805	ENSAMEG00000007596	CELF1	100	99.805	Ailuropoda_melanoleuca
ENSSSCG00000013233	CELF1	100	82.172	ENSACIG00000023843	celf1	100	80.943	Amphilophus_citrinellus
ENSSSCG00000013233	CELF1	100	84.178	ENSAOCG00000001252	celf1	100	85.193	Amphiprion_ocellaris
ENSSSCG00000013233	CELF1	100	84.381	ENSAPEG00000002340	celf1	100	85.462	Amphiprion_percula
ENSSSCG00000013233	CELF1	100	83.162	ENSATEG00000010871	celf1	100	82.136	Anabas_testudineus
ENSSSCG00000013233	CELF1	100	95.697	ENSACAG00000002114	CELF1	100	94.347	Anolis_carolinensis
ENSSSCG00000013233	CELF1	100	99.610	ENSANAG00000031770	CELF1	100	99.610	Aotus_nancymaae
ENSSSCG00000013233	CELF1	100	85.409	ENSACLG00000010181	-	100	86.345	Astatotilapia_calliptera
ENSSSCG00000013233	CELF1	100	82.143	ENSAMXG00000020576	celf1	96	81.453	Astyanax_mexicanus
ENSSSCG00000013233	CELF1	100	99.220	ENSBTAG00000002520	CELF1	100	99.220	Bos_taurus
ENSSSCG00000013233	CELF1	100	99.416	ENSCJAG00000020133	CELF1	100	99.802	Callithrix_jacchus
ENSSSCG00000013233	CELF1	100	100.000	ENSCAFG00000008452	CELF1	100	100.000	Canis_familiaris
ENSSSCG00000013233	CELF1	100	100.000	ENSCAFG00020025487	CELF1	100	100.000	Canis_lupus_dingo
ENSSSCG00000013233	CELF1	100	99.415	ENSCHIG00000024582	CELF1	100	99.415	Capra_hircus
ENSSSCG00000013233	CELF1	100	99.588	ENSTSYG00000003866	CELF1	100	99.588	Carlito_syrichta
ENSSSCG00000013233	CELF1	99	73.125	ENSCAPG00000006787	CELF1	100	71.595	Cavia_aperea
ENSSSCG00000013233	CELF1	100	99.589	ENSCPOG00000036381	CELF1	100	99.589	Cavia_porcellus
ENSSSCG00000013233	CELF1	100	99.588	ENSCCAG00000033487	CELF1	100	99.588	Cebus_capucinus
ENSSSCG00000013233	CELF1	100	99.588	ENSCATG00000040143	CELF1	100	99.588	Cercocebus_atys
ENSSSCG00000013233	CELF1	100	99.588	ENSCLAG00000011791	CELF1	100	99.415	Chinchilla_lanigera
ENSSSCG00000013233	CELF1	100	99.415	ENSCSAG00000005786	CELF1	100	99.415	Chlorocebus_sabaeus
ENSSSCG00000013233	CELF1	62	100.000	ENSCHOG00000004196	-	68	100.000	Choloepus_hoffmanni
ENSSSCG00000013233	CELF1	100	97.131	ENSCPBG00000022914	CELF1	100	96.933	Chrysemys_picta_bellii
ENSSSCG00000013233	CELF1	100	99.415	ENSCANG00000032689	CELF1	100	99.415	Colobus_angolensis_palliatus
ENSSSCG00000013233	CELF1	100	99.025	ENSCGRG00001011274	Celf1	100	99.025	Cricetulus_griseus_chok1gshd
ENSSSCG00000013233	CELF1	100	99.025	ENSCGRG00000015357	Celf1	100	99.025	Cricetulus_griseus_crigri
ENSSSCG00000013233	CELF1	100	74.538	ENSCSEG00000008675	celf1	100	79.778	Cynoglossus_semilaevis
ENSSSCG00000013233	CELF1	100	83.004	ENSDARG00000005315	celf1	100	88.757	Danio_rerio
ENSSSCG00000013233	CELF1	100	99.610	ENSDNOG00000009523	CELF1	100	99.588	Dasypus_novemcinctus
ENSSSCG00000013233	CELF1	100	88.499	ENSDORG00000013721	Celf1	100	88.499	Dipodomys_ordii
ENSSSCG00000013233	CELF1	73	100.000	ENSETEG00000004507	CELF1	83	100.000	Echinops_telfairi
ENSSSCG00000013233	CELF1	100	92.218	ENSEASG00005010831	CELF1	100	91.829	Equus_asinus_asinus
ENSSSCG00000013233	CELF1	100	100.000	ENSECAG00000007741	CELF1	100	99.220	Equus_caballus
ENSSSCG00000013233	CELF1	100	81.276	ENSEEUG00000009782	CELF1	100	81.276	Erinaceus_europaeus
ENSSSCG00000013233	CELF1	100	83.573	ENSELUG00000023173	celf1	100	83.333	Esox_lucius
ENSSSCG00000013233	CELF1	100	100.000	ENSFCAG00000002535	CELF1	100	100.000	Felis_catus
ENSSSCG00000013233	CELF1	100	95.736	ENSFALG00000006402	CELF1	100	95.736	Ficedula_albicollis
ENSSSCG00000013233	CELF1	100	99.177	ENSFDAG00000008517	CELF1	100	98.973	Fukomys_damarensis
ENSSSCG00000013233	CELF1	100	83.673	ENSGMOG00000012783	celf1	99	83.130	Gadus_morhua
ENSSSCG00000013233	CELF1	100	96.124	ENSGALG00000008097	CELF1	100	96.124	Gallus_gallus
ENSSSCG00000013233	CELF1	100	78.373	ENSGACG00000014226	celf1	100	73.878	Gasterosteus_aculeatus
ENSSSCG00000013233	CELF1	100	97.131	ENSGAGG00000011562	CELF1	100	96.311	Gopherus_agassizii
ENSSSCG00000013233	CELF1	100	99.416	ENSGGOG00000004106	CELF1	100	99.416	Gorilla_gorilla
ENSSSCG00000013233	CELF1	100	85.409	ENSHBUG00000017881	celf1	100	85.409	Haplochromis_burtoni
ENSSSCG00000013233	CELF1	100	90.965	ENSHGLG00000019214	-	100	90.554	Heterocephalus_glaber_female
ENSSSCG00000013233	CELF1	100	99.179	ENSHGLG00000006909	-	100	99.179	Heterocephalus_glaber_female
ENSSSCG00000013233	CELF1	100	94.045	ENSHGLG00100017423	-	100	93.634	Heterocephalus_glaber_male
ENSSSCG00000013233	CELF1	100	99.179	ENSHGLG00100013863	-	100	99.179	Heterocephalus_glaber_male
ENSSSCG00000013233	CELF1	100	85.451	ENSHCOG00000000258	celf1	100	84.836	Hippocampus_comes
ENSSSCG00000013233	CELF1	100	81.980	ENSIPUG00000023708	celf1	100	82.376	Ictalurus_punctatus
ENSSSCG00000013233	CELF1	100	99.588	ENSSTOG00000000613	CELF1	100	99.415	Ictidomys_tridecemlineatus
ENSSSCG00000013233	CELF1	100	99.610	ENSJJAG00000020280	Celf1	100	99.610	Jaculus_jaculus
ENSSSCG00000013233	CELF1	100	86.653	ENSLBEG00000018296	celf1	93	85.484	Labrus_bergylta
ENSSSCG00000013233	CELF1	70	85.546	ENSLBEG00000002047	-	98	83.776	Labrus_bergylta
ENSSSCG00000013233	CELF1	71	81.250	ENSLACG00000018990	CELF1	92	81.522	Latimeria_chalumnae
ENSSSCG00000013233	CELF1	100	86.653	ENSLOCG00000005966	celf1	95	86.139	Lepisosteus_oculatus
ENSSSCG00000013233	CELF1	100	99.588	ENSLAFG00000003484	CELF1	100	99.220	Loxodonta_africana
ENSSSCG00000013233	CELF1	100	99.384	ENSMFAG00000003505	CELF1	100	99.384	Macaca_fascicularis
ENSSSCG00000013233	CELF1	100	99.415	ENSMMUG00000011657	CELF1	100	99.415	Macaca_mulatta
ENSSSCG00000013233	CELF1	100	99.588	ENSMNEG00000022558	CELF1	100	99.588	Macaca_nemestrina
ENSSSCG00000013233	CELF1	100	99.610	ENSMLEG00000040834	CELF1	100	99.610	Mandrillus_leucophaeus
ENSSSCG00000013233	CELF1	100	82.992	ENSMAMG00000010052	celf1	100	81.557	Mastacembelus_armatus
ENSSSCG00000013233	CELF1	100	85.409	ENSMZEG00005018307	celf1	100	85.409	Maylandia_zebra
ENSSSCG00000013233	CELF1	100	95.918	ENSMGAG00000010629	CELF1	98	94.059	Meleagris_gallopavo
ENSSSCG00000013233	CELF1	100	99.025	ENSMAUG00000009468	Celf1	100	99.025	Mesocricetus_auratus
ENSSSCG00000013233	CELF1	100	99.416	ENSMICG00000045113	CELF1	100	99.416	Microcebus_murinus
ENSSSCG00000013233	CELF1	100	99.220	ENSMOCG00000012633	Celf1	100	99.220	Microtus_ochrogaster
ENSSSCG00000013233	CELF1	100	82.582	ENSMMOG00000015460	celf1	100	77.869	Mola_mola
ENSSSCG00000013233	CELF1	100	97.942	ENSMODG00000019913	CELF1	100	97.942	Monodelphis_domestica
ENSSSCG00000013233	CELF1	100	99.220	MGP_CAROLIEiJ_G0023949	Celf1	100	99.220	Mus_caroli
ENSSSCG00000013233	CELF1	100	99.220	ENSMUSG00000005506	Celf1	100	99.220	Mus_musculus
ENSSSCG00000013233	CELF1	100	99.220	MGP_PahariEiJ_G0025385	Celf1	100	99.220	Mus_pahari
ENSSSCG00000013233	CELF1	100	99.025	MGP_SPRETEiJ_G0024859	Celf1	100	99.025	Mus_spretus
ENSSSCG00000013233	CELF1	100	100.000	ENSMPUG00000003960	CELF1	93	100.000	Mustela_putorius_furo
ENSSSCG00000013233	CELF1	100	98.646	ENSMLUG00000016631	CELF1	100	98.646	Myotis_lucifugus
ENSSSCG00000013233	CELF1	100	97.661	ENSNGAG00000017390	Celf1	100	97.661	Nannospalax_galili
ENSSSCG00000013233	CELF1	99	55.488	ENSNBRG00000023547	-	85	57.974	Neolamprologus_brichardi
ENSSSCG00000013233	CELF1	100	99.415	ENSNLEG00000014638	CELF1	100	99.415	Nomascus_leucogenys
ENSSSCG00000013233	CELF1	100	97.737	ENSMEUG00000007763	CELF1	100	97.737	Notamacropus_eugenii
ENSSSCG00000013233	CELF1	100	98.765	ENSOPRG00000003239	-	100	98.765	Ochotona_princeps
ENSSSCG00000013233	CELF1	100	99.588	ENSODEG00000015204	CELF1	100	99.415	Octodon_degus
ENSSSCG00000013233	CELF1	100	84.660	ENSONIG00000008300	celf1	100	84.660	Oreochromis_niloticus
ENSSSCG00000013233	CELF1	100	97.741	ENSOANG00000007896	CELF1	99	97.276	Ornithorhynchus_anatinus
ENSSSCG00000013233	CELF1	100	99.177	ENSOCUG00000001311	CELF1	100	99.025	Oryctolagus_cuniculus
ENSSSCG00000013233	CELF1	100	79.346	ENSOMEG00000002381	celf1	100	79.141	Oryzias_melastigma
ENSSSCG00000013233	CELF1	100	98.453	ENSOGAG00000011600	CELF1	100	98.453	Otolemur_garnettii
ENSSSCG00000013233	CELF1	100	99.383	ENSOARG00000006924	CELF1	100	99.383	Ovis_aries
ENSSSCG00000013233	CELF1	100	99.588	ENSPPAG00000033870	CELF1	100	99.588	Pan_paniscus
ENSSSCG00000013233	CELF1	100	100.000	ENSPPRG00000002376	CELF1	100	100.000	Panthera_pardus
ENSSSCG00000013233	CELF1	100	100.000	ENSPTIG00000003974	CELF1	100	100.000	Panthera_tigris_altaica
ENSSSCG00000013233	CELF1	100	99.416	ENSPTRG00000052299	CELF1	100	99.416	Pan_troglodytes
ENSSSCG00000013233	CELF1	100	99.416	ENSPANG00000021676	CELF1	100	99.416	Papio_anubis
ENSSSCG00000013233	CELF1	100	86.885	ENSPKIG00000012324	celf1	100	85.861	Paramormyrops_kingsleyae
ENSSSCG00000013233	CELF1	100	94.683	ENSPSIG00000003922	CELF1	100	93.992	Pelodiscus_sinensis
ENSSSCG00000013233	CELF1	100	86.957	ENSPMGG00000013192	celf1	100	77.149	Periophthalmus_magnuspinnatus
ENSSSCG00000013233	CELF1	100	99.220	ENSPEMG00000015644	Celf1	100	99.220	Peromyscus_maniculatus_bairdii
ENSSSCG00000013233	CELF1	100	97.942	ENSPCIG00000022947	CELF1	100	97.809	Phascolarctos_cinereus
ENSSSCG00000013233	CELF1	70	70.118	ENSPFOG00000000961	-	100	67.456	Poecilia_formosa
ENSSSCG00000013233	CELF1	88	70.468	ENSPLAG00000019373	-	88	67.039	Poecilia_latipinna
ENSSSCG00000013233	CELF1	100	74.180	ENSPREG00000022185	-	100	77.521	Poecilia_reticulata
ENSSSCG00000013233	CELF1	100	98.638	ENSPPYG00000003302	CELF1	100	98.638	Pongo_abelii
ENSSSCG00000013233	CELF1	100	97.942	ENSPCAG00000002631	CELF1	100	97.942	Procavia_capensis
ENSSSCG00000013233	CELF1	100	94.747	ENSPCOG00000021865	CELF1	100	94.358	Propithecus_coquereli
ENSSSCG00000013233	CELF1	97	100.000	ENSPVAG00000007340	CELF1	100	100.000	Pteropus_vampyrus
ENSSSCG00000013233	CELF1	78	73.669	ENSPNYG00000023719	-	88	73.148	Pundamilia_nyererei
ENSSSCG00000013233	CELF1	100	82.376	ENSPNAG00000013418	celf1	96	82.061	Pygocentrus_nattereri
ENSSSCG00000013233	CELF1	100	98.768	ENSRNOG00000010379	Celf1	100	98.768	Rattus_norvegicus
ENSSSCG00000013233	CELF1	100	99.416	ENSRBIG00000042406	CELF1	100	99.416	Rhinopithecus_bieti
ENSSSCG00000013233	CELF1	100	99.610	ENSRROG00000032588	CELF1	100	99.610	Rhinopithecus_roxellana
ENSSSCG00000013233	CELF1	100	88.521	ENSSBOG00000021912	CELF1	100	88.521	Saimiri_boliviensis_boliviensis
ENSSSCG00000013233	CELF1	100	97.947	ENSSHAG00000017438	CELF1	100	97.947	Sarcophilus_harrisii
ENSSSCG00000013233	CELF1	100	87.910	ENSSFOG00015019353	celf1	97	85.069	Scleropages_formosus
ENSSSCG00000013233	CELF1	100	86.475	ENSSMAG00000013827	celf1	96	84.418	Scophthalmus_maximus
ENSSSCG00000013233	CELF1	100	85.861	ENSSDUG00000011558	celf1	96	83.826	Seriola_dumerili
ENSSSCG00000013233	CELF1	100	86.408	ENSSLDG00000012863	celf1	100	86.408	Seriola_lalandi_dorsalis
ENSSSCG00000013233	CELF1	100	94.033	ENSSARG00000003207	CELF1	100	94.033	Sorex_araneus
ENSSSCG00000013233	CELF1	100	96.728	ENSSPUG00000004228	CELF1	100	96.705	Sphenodon_punctatus
ENSSSCG00000013233	CELF1	100	84.178	ENSSPAG00000009569	celf1	100	85.193	Stegastes_partitus
ENSSSCG00000013233	CELF1	100	96.721	ENSTGUG00000010377	CELF1	100	96.505	Taeniopygia_guttata
ENSSSCG00000013233	CELF1	100	66.871	ENSTRUG00000000617	celf1	100	66.871	Takifugu_rubripes
ENSSSCG00000013233	CELF1	83	99.338	ENSTBEG00000005140	CELF1	83	99.338	Tupaia_belangeri
ENSSSCG00000013233	CELF1	100	100.000	ENSTTRG00000014157	CELF1	100	100.000	Tursiops_truncatus
ENSSSCG00000013233	CELF1	90	100.000	ENSUAMG00000000223	CELF1	100	100.000	Ursus_americanus
ENSSSCG00000013233	CELF1	100	100.000	ENSUMAG00000009218	CELF1	100	100.000	Ursus_maritimus
ENSSSCG00000013233	CELF1	100	86.420	ENSVPAG00000000336	CELF1	100	86.420	Vicugna_pacos
ENSSSCG00000013233	CELF1	100	100.000	ENSVVUG00000023439	CELF1	100	100.000	Vulpes_vulpes
ENSSSCG00000013233	CELF1	100	87.928	ENSXETG00000009044	celf1	100	87.123	Xenopus_tropicalis
ENSSSCG00000013233	CELF1	87	59.882	ENSXCOG00000017706	-	87	62.813	Xiphophorus_couchianus
ENSSSCG00000013233	CELF1	100	73.101	ENSXMAG00000029339	-	100	72.117	Xiphophorus_maculatus