EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000013419 (Gene tree)
Gene ID: 100521839
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 11463 bases
Position: chr2:77479220-77490682
Accession: 100521839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000054189	R3H	PF01424.22	1.7e-06	1	1
ENSSSCP00000014268	R3H	PF01424.22	1.8e-06	1	1
ENSSSCP00000043941	R3H	PF01424.22	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014663	R3HDM4-202	1856	XM_005661363	ENSSSCP00000014268	275 (aa)	XP_005661420	F1S6S8
ENSSSCT00000053486	R3HDM4-201	3376	XM_003122984	ENSSSCP00000054189	272 (aa)	XP_003123032	A0A287BCY5
ENSSSCT00000050362	R3HDM4-203	3271	XM_013994802	ENSSSCP00000043941	275 (aa)	XP_013850256	F1S6S8

Gene Model

Click here to download ENSSSCG00000013419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013419's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000013419	R3HDM4	100	92.279	ENSG00000198858	R3HDM4	100	92.279	Homo_sapiens
ENSSSCG00000013419	R3HDM4	90	95.082	ENSAMEG00000003001	R3HDM4	100	95.082	Ailuropoda_melanoleuca
ENSSSCG00000013419	R3HDM4	87	58.403	ENSACIG00000004672	r3hdm4	91	58.403	Amphilophus_citrinellus
ENSSSCG00000013419	R3HDM4	86	54.894	ENSATEG00000015913	r3hdm4	91	56.170	Anabas_testudineus
ENSSSCG00000013419	R3HDM4	89	95.473	ENSANAG00000029748	R3HDM4	100	95.473	Aotus_nancymaae
ENSSSCG00000013419	R3HDM4	100	94.853	ENSBTAG00000046406	R3HDM4	100	94.853	Bos_taurus
ENSSSCG00000013419	R3HDM4	94	91.765	ENSCJAG00000020114	R3HDM4	95	91.765	Callithrix_jacchus
ENSSSCG00000013419	R3HDM4	100	94.118	ENSCAFG00000019665	R3HDM4	100	94.118	Canis_familiaris
ENSSSCG00000013419	R3HDM4	100	93.750	ENSCAFG00020016880	R3HDM4	100	93.750	Canis_lupus_dingo
ENSSSCG00000013419	R3HDM4	100	95.588	ENSCHIG00000020110	R3HDM4	100	95.588	Capra_hircus
ENSSSCG00000013419	R3HDM4	92	90.909	ENSCCAG00000019955	R3HDM4	92	90.909	Cebus_capucinus
ENSSSCG00000013419	R3HDM4	100	90.146	ENSCATG00000037269	R3HDM4	100	90.876	Cercocebus_atys
ENSSSCG00000013419	R3HDM4	90	92.213	ENSCLAG00000007094	R3HDM4	100	92.213	Chinchilla_lanigera
ENSSSCG00000013419	R3HDM4	100	91.176	ENSCSAG00000012574	R3HDM4	100	91.176	Chlorocebus_sabaeus
ENSSSCG00000013419	R3HDM4	90	71.429	ENSCPBG00000009805	R3HDM4	93	71.429	Chrysemys_picta_bellii
ENSSSCG00000013419	R3HDM4	90	95.102	ENSCANG00000040439	R3HDM4	86	95.492	Colobus_angolensis_palliatus
ENSSSCG00000013419	R3HDM4	99	83.824	ENSCGRG00001021650	R3hdm4	100	84.191	Cricetulus_griseus_chok1gshd
ENSSSCG00000013419	R3HDM4	99	83.824	ENSCGRG00000013169	R3hdm4	100	84.191	Cricetulus_griseus_crigri
ENSSSCG00000013419	R3HDM4	87	55.042	ENSCSEG00000018211	r3hdm4	91	55.042	Cynoglossus_semilaevis
ENSSSCG00000013419	R3HDM4	91	57.200	ENSCVAG00000017127	r3hdm4	93	57.200	Cyprinodon_variegatus
ENSSSCG00000013419	R3HDM4	92	89.328	ENSDORG00000006605	R3hdm4	100	90.612	Dipodomys_ordii
ENSSSCG00000013419	R3HDM4	100	87.636	ENSEASG00005021556	R3HDM4	100	87.636	Equus_asinus_asinus
ENSSSCG00000013419	R3HDM4	100	94.485	ENSECAG00000000003	R3HDM4	100	95.221	Equus_caballus
ENSSSCG00000013419	R3HDM4	100	94.853	ENSFCAG00000042437	R3HDM4	100	94.853	Felis_catus
ENSSSCG00000013419	R3HDM4	89	68.724	ENSFALG00000013938	R3HDM4	100	68.724	Ficedula_albicollis
ENSSSCG00000013419	R3HDM4	90	90.612	ENSFDAG00000017040	R3HDM4	100	90.612	Fukomys_damarensis
ENSSSCG00000013419	R3HDM4	91	57.200	ENSFHEG00000017636	r3hdm4	93	57.200	Fundulus_heteroclitus
ENSSSCG00000013419	R3HDM4	91	51.807	ENSGMOG00000001231	r3hdm4	98	52.800	Gadus_morhua
ENSSSCG00000013419	R3HDM4	93	65.769	ENSGALG00000001998	R3HDM4	98	65.769	Gallus_gallus
ENSSSCG00000013419	R3HDM4	91	57.028	ENSGAFG00000004173	r3hdm4	92	58.824	Gambusia_affinis
ENSSSCG00000013419	R3HDM4	94	67.692	ENSGAGG00000019698	R3HDM4	98	67.692	Gopherus_agassizii
ENSSSCG00000013419	R3HDM4	99	88.519	ENSGGOG00000008040	R3HDM4	100	95.082	Gorilla_gorilla
ENSSSCG00000013419	R3HDM4	87	56.485	ENSHBUG00000014810	r3hdm4	91	57.741	Haplochromis_burtoni
ENSSSCG00000013419	R3HDM4	100	86.397	ENSHGLG00000016194	R3HDM4	100	87.500	Heterocephalus_glaber_female
ENSSSCG00000013419	R3HDM4	87	56.356	ENSHCOG00000008422	r3hdm4	91	56.356	Hippocampus_comes
ENSSSCG00000013419	R3HDM4	87	55.882	ENSIPUG00000006716	r3hdm4	91	55.882	Ictalurus_punctatus
ENSSSCG00000013419	R3HDM4	90	90.984	ENSSTOG00000023015	R3HDM4	100	90.984	Ictidomys_tridecemlineatus
ENSSSCG00000013419	R3HDM4	99	87.868	ENSJJAG00000012475	R3hdm4	100	87.868	Jaculus_jaculus
ENSSSCG00000013419	R3HDM4	91	56.400	ENSKMAG00000005853	r3hdm4	93	56.400	Kryptolebias_marmoratus
ENSSSCG00000013419	R3HDM4	87	56.723	ENSLBEG00000000730	r3hdm4	91	56.723	Labrus_bergylta
ENSSSCG00000013419	R3HDM4	96	58.462	ENSLACG00000016445	R3HDM4	100	58.462	Latimeria_chalumnae
ENSSSCG00000013419	R3HDM4	88	58.159	ENSLOCG00000002423	r3hdm4	91	58.159	Lepisosteus_oculatus
ENSSSCG00000013419	R3HDM4	89	94.262	ENSLAFG00000017796	R3HDM4	94	94.262	Loxodonta_africana
ENSSSCG00000013419	R3HDM4	100	91.544	ENSMFAG00000044131	R3HDM4	100	91.544	Macaca_fascicularis
ENSSSCG00000013419	R3HDM4	100	84.191	ENSMMUG00000009682	R3HDM4	90	94.619	Macaca_mulatta
ENSSSCG00000013419	R3HDM4	90	94.672	ENSMNEG00000044115	R3HDM4	99	94.672	Macaca_nemestrina
ENSSSCG00000013419	R3HDM4	90	92.683	ENSMLEG00000035693	R3HDM4	91	93.117	Mandrillus_leucophaeus
ENSSSCG00000013419	R3HDM4	75	60.194	ENSMAMG00000005652	r3hdm4	82	60.194	Mastacembelus_armatus
ENSSSCG00000013419	R3HDM4	99	79.779	ENSMAUG00000010611	R3hdm4	100	83.333	Mesocricetus_auratus
ENSSSCG00000013419	R3HDM4	100	91.544	ENSMICG00000010124	R3HDM4	100	91.544	Microcebus_murinus
ENSSSCG00000013419	R3HDM4	99	82.288	ENSMOCG00000002646	R3hdm4	100	82.657	Microtus_ochrogaster
ENSSSCG00000013419	R3HDM4	87	57.143	ENSMMOG00000008253	r3hdm4	92	57.143	Mola_mola
ENSSSCG00000013419	R3HDM4	85	68.966	ENSMODG00000005698	R3HDM4	100	68.966	Monodelphis_domestica
ENSSSCG00000013419	R3HDM4	87	56.303	ENSMALG00000018856	r3hdm4	91	56.303	Monopterus_albus
ENSSSCG00000013419	R3HDM4	99	82.288	MGP_CAROLIEiJ_G0015551	R3hdm4	100	83.395	Mus_caroli
ENSSSCG00000013419	R3HDM4	99	81.919	ENSMUSG00000035781	R3hdm4	100	83.026	Mus_musculus
ENSSSCG00000013419	R3HDM4	99	81.919	MGP_PahariEiJ_G0030964	R3hdm4	100	83.026	Mus_pahari
ENSSSCG00000013419	R3HDM4	99	81.919	MGP_SPRETEiJ_G0016369	-	84	83.026	Mus_spretus
ENSSSCG00000013419	R3HDM4	90	93.443	ENSMPUG00000009394	R3HDM4	91	93.469	Mustela_putorius_furo
ENSSSCG00000013419	R3HDM4	87	56.067	ENSNBRG00000004438	r3hdm4	91	57.322	Neolamprologus_brichardi
ENSSSCG00000013419	R3HDM4	83	93.074	ENSNLEG00000001022	R3HDM4	100	93.074	Nomascus_leucogenys
ENSSSCG00000013419	R3HDM4	90	67.206	ENSMEUG00000011020	R3HDM4	99	68.776	Notamacropus_eugenii
ENSSSCG00000013419	R3HDM4	100	88.235	ENSODEG00000011745	R3HDM4	100	88.235	Octodon_degus
ENSSSCG00000013419	R3HDM4	87	56.067	ENSONIG00000012675	r3hdm4	84	57.322	Oreochromis_niloticus
ENSSSCG00000013419	R3HDM4	87	58.577	ENSOMEG00000003005	r3hdm4	91	58.577	Oryzias_melastigma
ENSSSCG00000013419	R3HDM4	89	94.215	ENSOGAG00000025656	R3HDM4	92	94.239	Otolemur_garnettii
ENSSSCG00000013419	R3HDM4	90	97.131	ENSOARG00000009945	R3HDM4	100	97.131	Ovis_aries
ENSSSCG00000013419	R3HDM4	99	88.889	ENSPPAG00000042371	R3HDM4	100	95.492	Pan_paniscus
ENSSSCG00000013419	R3HDM4	100	91.544	ENSPANG00000015203	R3HDM4	100	91.544	Papio_anubis
ENSSSCG00000013419	R3HDM4	85	56.957	ENSPKIG00000007421	r3hdm4	88	56.838	Paramormyrops_kingsleyae
ENSSSCG00000013419	R3HDM4	92	53.360	ENSPMGG00000020467	r3hdm4	94	53.360	Periophthalmus_magnuspinnatus
ENSSSCG00000013419	R3HDM4	89	88.889	ENSPEMG00000008365	Tmem259	100	88.889	Peromyscus_maniculatus_bairdii
ENSSSCG00000013419	R3HDM4	91	57.028	ENSPFOG00000003199	r3hdm4	93	57.028	Poecilia_formosa
ENSSSCG00000013419	R3HDM4	91	56.627	ENSPMEG00000014183	r3hdm4	93	56.627	Poecilia_mexicana
ENSSSCG00000013419	R3HDM4	91	57.430	ENSPREG00000010709	r3hdm4	93	57.430	Poecilia_reticulata
ENSSSCG00000013419	R3HDM4	100	89.706	ENSPPYG00000009297	R3HDM4	100	89.706	Pongo_abelii
ENSSSCG00000013419	R3HDM4	56	94.079	ENSPCAG00000010997	R3HDM4	56	94.079	Procavia_capensis
ENSSSCG00000013419	R3HDM4	100	91.544	ENSPCOG00000016785	R3HDM4	100	91.544	Propithecus_coquereli
ENSSSCG00000013419	R3HDM4	87	56.485	ENSPNYG00000017489	r3hdm4	91	57.741	Pundamilia_nyererei
ENSSSCG00000013419	R3HDM4	99	82.657	ENSRNOG00000011489	R3hdm4	100	83.026	Rattus_norvegicus
ENSSSCG00000013419	R3HDM4	90	95.492	ENSRROG00000028842	R3HDM4	91	95.492	Rhinopithecus_roxellana
ENSSSCG00000013419	R3HDM4	91	90.514	ENSSBOG00000019298	R3HDM4	75	89.883	Saimiri_boliviensis_boliviensis
ENSSSCG00000013419	R3HDM4	54	71.918	ENSSHAG00000003036	-	100	71.918	Sarcophilus_harrisii
ENSSSCG00000013419	R3HDM4	87	55.042	ENSSFOG00015020574	r3hdm4	87	55.042	Scleropages_formosus
ENSSSCG00000013419	R3HDM4	87	58.577	ENSSMAG00000021090	r3hdm4	68	58.577	Scophthalmus_maximus
ENSSSCG00000013419	R3HDM4	87	58.996	ENSSDUG00000008488	r3hdm4	91	58.996	Seriola_dumerili
ENSSSCG00000013419	R3HDM4	87	58.996	ENSSLDG00000025328	r3hdm4	91	58.996	Seriola_lalandi_dorsalis
ENSSSCG00000013419	R3HDM4	88	72.083	ENSSPUG00000005434	R3HDM4	93	72.083	Sphenodon_punctatus
ENSSSCG00000013419	R3HDM4	86	54.661	ENSSPAG00000002562	r3hdm4	90	54.661	Stegastes_partitus
ENSSSCG00000013419	R3HDM4	76	65.550	ENSTGUG00000000663	R3HDM4	100	65.550	Taeniopygia_guttata
ENSSSCG00000013419	R3HDM4	90	93.443	ENSTTRG00000001470	R3HDM4	100	93.443	Tursiops_truncatus
ENSSSCG00000013419	R3HDM4	100	82.353	ENSUAMG00000005751	R3HDM4	100	95.516	Ursus_americanus
ENSSSCG00000013419	R3HDM4	100	94.853	ENSVVUG00000022685	R3HDM4	100	94.853	Vulpes_vulpes
ENSSSCG00000013419	R3HDM4	89	47.154	ENSXETG00000033624	R3HDM4	95	47.154	Xenopus_tropicalis
ENSSSCG00000013419	R3HDM4	91	56.800	ENSXCOG00000005127	r3hdm4	93	56.800	Xiphophorus_couchianus
ENSSSCG00000013419	R3HDM4	91	57.028	ENSXMAG00000022875	r3hdm4	93	57.028	Xiphophorus_maculatus