EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000013523 (Gene tree)
Gene ID: 100515877
Gene Symbol: SAFB2
Alias: KIAA0138
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 34799 bases
Position: chr2:73334561-73369359
Accession: 100515877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000033754	RRM_1	PF00076.22	5.9e-14	1	1
ENSSSCP00000035750	RRM_1	PF00076.22	6.5e-14	1	1
ENSSSCP00000014370	RRM_1	PF00076.22	7.8e-14	1	1
ENSSSCP00000035750	SAP	PF02037.27	2e-10	1	1
ENSSSCP00000014370	SAP	PF02037.27	2.2e-10	1	1
ENSSSCP00000033754	SAP	PF02037.27	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014770	SAFB2-201	3233	XM_021084025	ENSSSCP00000014370	954 (aa)	XP_020939684	F1SBU9
ENSSSCT00000063521	SAFB2-203	5276	XM_021084027	ENSSSCP00000035750	864 (aa)	XP_020939686	A0A286ZW75
ENSSSCT00000065034	SAFB2-202	3011	XM_021084026	ENSSSCP00000033754	903 (aa)	XP_020939685	A0A286ZQ76

Gene Model

Click here to download ENSSSCG00000013523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000013523	SAFB2	98	68.065	ENSSSCG00000013522	SAFB	99	68.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000013523	SAFB2	100	88.901	ENSG00000130254	SAFB2	100	88.901	Homo_sapiens
ENSSSCG00000013523	SAFB2	100	90.596	ENSAMEG00000012146	SAFB2	100	90.596	Ailuropoda_melanoleuca
ENSSSCG00000013523	SAFB2	100	88.586	ENSANAG00000031936	SAFB2	100	89.005	Aotus_nancymaae
ENSSSCG00000013523	SAFB2	100	90.461	ENSBTAG00000001790	SAFB2	99	91.453	Bos_taurus
ENSSSCG00000013523	SAFB2	100	93.403	ENSCAFG00000018814	SAFB2	100	93.822	Canis_familiaris
ENSSSCG00000013523	SAFB2	100	93.403	ENSCAFG00020018939	SAFB2	100	93.822	Canis_lupus_dingo
ENSSSCG00000013523	SAFB2	100	90.147	ENSCHIG00000024547	SAFB2	100	90.356	Capra_hircus
ENSSSCG00000013523	SAFB2	70	69.518	ENSCAPG00000011771	SAFB2	100	66.703	Cavia_aperea
ENSSSCG00000013523	SAFB2	100	77.699	ENSCPOG00000011394	SAFB2	100	77.495	Cavia_porcellus
ENSSSCG00000013523	SAFB2	100	87.644	ENSCCAG00000017348	SAFB2	100	88.168	Cebus_capucinus
ENSSSCG00000013523	SAFB2	100	87.841	ENSCATG00000039497	SAFB2	100	87.841	Cercocebus_atys
ENSSSCG00000013523	SAFB2	100	88.586	ENSCSAG00000009959	SAFB2	100	88.586	Chlorocebus_sabaeus
ENSSSCG00000013523	SAFB2	82	77.715	ENSCHOG00000010684	SAFB2	100	78.279	Choloepus_hoffmanni
ENSSSCG00000013523	SAFB2	100	84.817	ENSCANG00000024675	SAFB2	100	84.342	Colobus_angolensis_palliatus
ENSSSCG00000013523	SAFB2	100	69.408	ENSCGRG00001015833	Safb2	100	68.806	Cricetulus_griseus_chok1gshd
ENSSSCG00000013523	SAFB2	100	69.408	ENSCGRG00000011131	Safb2	100	68.806	Cricetulus_griseus_crigri
ENSSSCG00000013523	SAFB2	51	83.182	ENSDNOG00000045791	-	99	84.091	Dasypus_novemcinctus
ENSSSCG00000013523	SAFB2	97	78.256	ENSDORG00000016199	Safb2	100	76.623	Dipodomys_ordii
ENSSSCG00000013523	SAFB2	91	86.424	ENSEASG00005022952	SAFB2	91	86.105	Equus_asinus_asinus
ENSSSCG00000013523	SAFB2	96	86.980	ENSECAG00000018978	SAFB2	100	86.932	Equus_caballus
ENSSSCG00000013523	SAFB2	100	91.824	ENSFCAG00000011834	SAFB2	100	92.348	Felis_catus
ENSSSCG00000013523	SAFB2	93	81.073	ENSFDAG00000020009	SAFB2	95	81.320	Fukomys_damarensis
ENSSSCG00000013523	SAFB2	100	84.912	ENSGGOG00000015093	SAFB2	100	83.871	Gorilla_gorilla
ENSSSCG00000013523	SAFB2	100	84.086	ENSHGLG00000017442	SAFB2	100	84.600	Heterocephalus_glaber_female
ENSSSCG00000013523	SAFB2	99	83.105	ENSLAFG00000003836	SAFB2	99	82.403	Loxodonta_africana
ENSSSCG00000013523	SAFB2	100	88.691	ENSMFAG00000039706	SAFB2	100	88.691	Macaca_fascicularis
ENSSSCG00000013523	SAFB2	100	89.005	ENSMMUG00000017968	SAFB2	100	89.005	Macaca_mulatta
ENSSSCG00000013523	SAFB2	100	82.899	ENSMNEG00000032042	SAFB2	100	82.451	Macaca_nemestrina
ENSSSCG00000013523	SAFB2	100	88.901	ENSMLEG00000034562	SAFB2	100	88.901	Mandrillus_leucophaeus
ENSSSCG00000013523	SAFB2	77	79.355	ENSMAUG00000011573	Safb2	92	73.609	Mesocricetus_auratus
ENSSSCG00000013523	SAFB2	100	88.180	ENSMICG00000008711	SAFB2	100	88.180	Microcebus_murinus
ENSSSCG00000013523	SAFB2	98	71.234	ENSMOCG00000006827	Safb2	100	68.410	Microtus_ochrogaster
ENSSSCG00000013523	SAFB2	98	73.073	ENSMODG00000001178	SAFB2	100	72.642	Monodelphis_domestica
ENSSSCG00000013523	SAFB2	100	69.116	MGP_CAROLIEiJ_G0021779	Safb2	100	68.222	Mus_caroli
ENSSSCG00000013523	SAFB2	100	69.483	ENSMUSG00000042625	Safb2	100	68.887	Mus_musculus
ENSSSCG00000013523	SAFB2	100	69.031	MGP_PahariEiJ_G0020768	Safb2	100	68.432	Mus_pahari
ENSSSCG00000013523	SAFB2	100	60.774	MGP_SPRETEiJ_G0022690	Safb2	100	63.608	Mus_spretus
ENSSSCG00000013523	SAFB2	100	91.414	ENSMPUG00000006106	SAFB2	93	91.518	Mustela_putorius_furo
ENSSSCG00000013523	SAFB2	100	86.010	ENSMLUG00000001050	SAFB2	100	84.767	Myotis_lucifugus
ENSSSCG00000013523	SAFB2	100	87.644	ENSNLEG00000013514	SAFB2	100	87.644	Nomascus_leucogenys
ENSSSCG00000013523	SAFB2	94	69.239	ENSMEUG00000002456	SAFB2	100	69.239	Notamacropus_eugenii
ENSSSCG00000013523	SAFB2	100	73.750	ENSOPRG00000011523	-	100	72.292	Ochotona_princeps
ENSSSCG00000013523	SAFB2	100	80.372	ENSODEG00000014751	SAFB2	100	80.372	Octodon_degus
ENSSSCG00000013523	SAFB2	50	56.948	ENSOANG00000011319	-	97	56.264	Ornithorhynchus_anatinus
ENSSSCG00000013523	SAFB2	50	77.674	ENSOCUG00000001592	-	98	77.674	Oryctolagus_cuniculus
ENSSSCG00000013523	SAFB2	100	85.983	ENSOGAG00000006855	SAFB2	100	86.088	Otolemur_garnettii
ENSSSCG00000013523	SAFB2	97	80.969	ENSOARG00000007982	SAFB2	67	92.258	Ovis_aries
ENSSSCG00000013523	SAFB2	100	89.110	ENSPPAG00000043392	SAFB2	100	89.110	Pan_paniscus
ENSSSCG00000013523	SAFB2	100	91.614	ENSPPRG00000011310	SAFB2	100	92.138	Panthera_pardus
ENSSSCG00000013523	SAFB2	93	77.459	ENSPTIG00000015120	SAFB2	100	75.376	Panthera_tigris_altaica
ENSSSCG00000013523	SAFB2	100	83.351	ENSPTRG00000010334	SAFB2	100	83.037	Pan_troglodytes
ENSSSCG00000013523	SAFB2	100	88.796	ENSPANG00000007004	SAFB2	100	88.796	Papio_anubis
ENSSSCG00000013523	SAFB2	100	67.363	ENSPEMG00000016015	Safb2	100	66.766	Peromyscus_maniculatus_bairdii
ENSSSCG00000013523	SAFB2	68	75.614	ENSPCIG00000009518	-	99	78.782	Phascolarctos_cinereus
ENSSSCG00000013523	SAFB2	100	89.215	ENSPPYG00000009427	SAFB2	100	89.215	Pongo_abelii
ENSSSCG00000013523	SAFB2	98	82.921	ENSPCAG00000006352	SAFB2	99	82.503	Procavia_capensis
ENSSSCG00000013523	SAFB2	100	85.010	ENSPCOG00000023260	SAFB2	100	82.845	Propithecus_coquereli
ENSSSCG00000013523	SAFB2	64	89.130	ENSPVAG00000004902	-	61	89.130	Pteropus_vampyrus
ENSSSCG00000013523	SAFB2	90	69.878	ENSRNOG00000049511	AABR07066522.1	99	67.561	Rattus_norvegicus
ENSSSCG00000013523	SAFB2	83	92.483	ENSRBIG00000033446	SAFB2	100	92.483	Rhinopithecus_bieti
ENSSSCG00000013523	SAFB2	100	88.901	ENSRROG00000006606	SAFB2	100	88.901	Rhinopithecus_roxellana
ENSSSCG00000013523	SAFB2	100	86.702	ENSSBOG00000032315	SAFB2	100	87.942	Saimiri_boliviensis_boliviensis
ENSSSCG00000013523	SAFB2	97	73.276	ENSSHAG00000012703	SAFB2	99	71.700	Sarcophilus_harrisii
ENSSSCG00000013523	SAFB2	86	75.258	ENSSARG00000000649	SAFB2	100	75.902	Sorex_araneus
ENSSSCG00000013523	SAFB2	79	78.193	ENSTBEG00000012709	SAFB2	85	79.584	Tupaia_belangeri
ENSSSCG00000013523	SAFB2	94	85.874	ENSTTRG00000013585	SAFB2	93	85.762	Tursiops_truncatus
ENSSSCG00000013523	SAFB2	98	93.063	ENSUAMG00000024695	SAFB2	98	93.116	Ursus_americanus
ENSSSCG00000013523	SAFB2	88	88.673	ENSUMAG00000009585	SAFB2	92	89.320	Ursus_maritimus
ENSSSCG00000013523	SAFB2	81	97.906	ENSVPAG00000012041	SAFB2	88	98.361	Vicugna_pacos
ENSSSCG00000013523	SAFB2	100	93.508	ENSVVUG00000013695	SAFB2	100	93.927	Vulpes_vulpes