EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000013600 (Gene tree)
Gene ID: 100513782
Gene Symbol: RAB11B
Alias: -
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 11716 bases
Position: chr2:70884460-70896175
Accession: 100513782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000014453	MMR_HSR1	PF01926.23	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014854	-	1958	-	ENSSSCP00000014453	218 (aa)	-	F2Z5J9

Gene Model

Click here to download ENSSSCG00000013600's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc04144	Endocytosis	KEGG
ssc04152	AMPK signaling pathway	KEGG
ssc04962	Vasopressin-regulated water reabsorption	KEGG
ssc05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000013600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000013600	RAB11B	72	38.217	ENSSSCG00000014828	RAB6A	75	38.217
ENSSSCG00000013600	RAB11B	95	48.387	ENSSSCG00000029544	RAB2B	99	48.387
ENSSSCG00000013600	RAB11B	55	30.894	ENSSSCG00000032709	ARL4A	60	30.894
ENSSSCG00000013600	RAB11B	75	33.537	ENSSSCG00000016434	RHEB	89	33.537
ENSSSCG00000013600	RAB11B	78	55.556	ENSSSCG00000006232	RAB2A	83	57.325
ENSSSCG00000013600	RAB11B	80	52.299	ENSSSCG00000005514	RAB14	81	52.299
ENSSSCG00000013600	RAB11B	72	31.013	ENSSSCG00000027443	MRAS	81	32.941
ENSSSCG00000013600	RAB11B	95	35.945	ENSSSCG00000030432	-	98	35.945
ENSSSCG00000013600	RAB11B	88	35.079	ENSSSCG00000029539	RAB23	80	35.079
ENSSSCG00000013600	RAB11B	72	43.949	ENSSSCG00000007513	RAB22A	81	43.949
ENSSSCG00000013600	RAB11B	94	41.748	ENSSSCG00000037653	RAB5A	91	41.748
ENSSSCG00000013600	RAB11B	79	47.126	ENSSSCG00000024233	RAB39B	82	47.126
ENSSSCG00000013600	RAB11B	81	40.331	ENSSSCG00000012658	RAB33A	65	40.331
ENSSSCG00000013600	RAB11B	68	35.333	ENSSSCG00000031513	HRAS	85	36.420
ENSSSCG00000013600	RAB11B	65	30.282	ENSSSCG00000036967	ARL8A	72	30.282
ENSSSCG00000013600	RAB11B	94	33.493	ENSSSCG00000010048	RAB36	79	33.493
ENSSSCG00000013600	RAB11B	78	32.941	ENSSSCG00000026969	KRAS	93	34.066
ENSSSCG00000013600	RAB11B	76	41.916	ENSSSCG00000038026	RAB12	84	37.736
ENSSSCG00000013600	RAB11B	100	61.261	ENSSSCG00000039186	RAB25	100	61.261
ENSSSCG00000013600	RAB11B	94	42.995	ENSSSCG00000032467	RAB5C	90	42.995
ENSSSCG00000013600	RAB11B	76	47.273	ENSSSCG00000006564	-	81	47.273
ENSSSCG00000013600	RAB11B	96	39.524	ENSSSCG00000014900	RAB30	97	39.524
ENSSSCG00000013600	RAB11B	71	30.000	ENSSSCG00000008577	DNAJC27	90	30.000
ENSSSCG00000013600	RAB11B	76	48.193	ENSSSCG00000033876	RAB35	99	42.105
ENSSSCG00000013600	RAB11B	72	40.491	ENSSSCG00000011615	RAB7A	78	40.491
ENSSSCG00000013600	RAB11B	78	39.205	ENSSSCG00000020711	RAB33B	76	39.205
ENSSSCG00000013600	RAB11B	74	35.404	ENSSSCG00000036503	RAB6B	77	35.404
ENSSSCG00000013600	RAB11B	99	45.581	ENSSSCG00000008359	RAB1A	100	45.894
ENSSSCG00000013600	RAB11B	83	43.094	ENSSSCG00000002280	RAB15	85	43.094
ENSSSCG00000013600	RAB11B	77	40.462	ENSSSCG00000032672	RAB9B	86	40.462
ENSSSCG00000013600	RAB11B	70	35.000	ENSSSCG00000017769	RAB34	60	35.000
ENSSSCG00000013600	RAB11B	74	47.531	ENSSSCG00000028655	RAB18	78	47.531
ENSSSCG00000013600	RAB11B	70	36.129	ENSSSCG00000032477	NRAS	87	37.126
ENSSSCG00000013600	RAB11B	52	32.203	ENSSSCG00000017380	ARL4D	59	31.667
ENSSSCG00000013600	RAB11B	81	39.560	ENSSSCG00000012123	RAB9A	87	39.560
ENSSSCG00000013600	RAB11B	100	91.284	ENSSSCG00000032312	RAB11A	100	91.284
ENSSSCG00000013600	RAB11B	68	36.424	ENSSSCG00000025041	-	85	36.424
ENSSSCG00000013600	RAB11B	96	48.325	ENSSSCG00000012954	RAB1B	99	48.325

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000013600	RAB11B	100	100.000	ENSG00000185236	RAB11B	100	100.000	Homo_sapiens
ENSSSCG00000013600	RAB11B	99	98.630	ENSAMEG00000004955	RAB11B	99	98.630	Ailuropoda_melanoleuca
ENSSSCG00000013600	RAB11B	83	92.265	ENSACIG00000024374	rab11ba	70	97.059	Amphilophus_citrinellus
ENSSSCG00000013600	RAB11B	100	94.495	ENSAOCG00000018050	rab11ba	100	94.495	Amphiprion_ocellaris
ENSSSCG00000013600	RAB11B	100	94.037	ENSAPEG00000009177	rab11ba	100	94.037	Amphiprion_percula
ENSSSCG00000013600	RAB11B	100	95.413	ENSATEG00000023730	rab11ba	100	95.413	Anabas_testudineus
ENSSSCG00000013600	RAB11B	100	100.000	ENSANAG00000037616	RAB11B	100	100.000	Aotus_nancymaae
ENSSSCG00000013600	RAB11B	100	93.119	ENSACLG00000005420	rab11ba	100	93.119	Astatotilapia_calliptera
ENSSSCG00000013600	RAB11B	93	87.685	ENSACLG00000018852	-	92	87.685	Astatotilapia_calliptera
ENSSSCG00000013600	RAB11B	99	80.556	WBGene00004274	rab-11.1	99	80.556	Caenorhabditis_elegans
ENSSSCG00000013600	RAB11B	100	100.000	ENSCJAG00000010778	RAB11B	100	100.000	Callithrix_jacchus
ENSSSCG00000013600	RAB11B	100	100.000	ENSCAFG00000032060	RAB11B	100	100.000	Canis_familiaris
ENSSSCG00000013600	RAB11B	100	100.000	ENSCAFG00020022184	RAB11B	100	100.000	Canis_lupus_dingo
ENSSSCG00000013600	RAB11B	100	100.000	ENSTSYG00000014758	RAB11B	100	100.000	Carlito_syrichta
ENSSSCG00000013600	RAB11B	100	99.541	ENSCPOG00000030154	RAB11B	100	99.541	Cavia_porcellus
ENSSSCG00000013600	RAB11B	100	100.000	ENSCCAG00000031042	RAB11B	100	100.000	Cebus_capucinus
ENSSSCG00000013600	RAB11B	100	100.000	ENSCLAG00000003207	RAB11B	100	100.000	Chinchilla_lanigera
ENSSSCG00000013600	RAB11B	100	100.000	ENSCSAG00000008024	RAB11B	100	100.000	Chlorocebus_sabaeus
ENSSSCG00000013600	RAB11B	100	85.780	ENSCHOG00000013525	RAB11B	100	85.780	Choloepus_hoffmanni
ENSSSCG00000013600	RAB11B	100	84.475	ENSCING00000009526	-	100	84.475	Ciona_intestinalis
ENSSSCG00000013600	RAB11B	100	100.000	ENSCANG00000040517	RAB11B	100	100.000	Colobus_angolensis_palliatus
ENSSSCG00000013600	RAB11B	100	100.000	ENSCGRG00001013827	Rab11b	100	100.000	Cricetulus_griseus_chok1gshd
ENSSSCG00000013600	RAB11B	100	100.000	ENSCGRG00000010967	Rab11b	100	100.000	Cricetulus_griseus_crigri
ENSSSCG00000013600	RAB11B	100	94.495	ENSCSEG00000007121	rab11ba	84	94.495	Cynoglossus_semilaevis
ENSSSCG00000013600	RAB11B	100	96.330	ENSDARG00000041878	rab11ba	100	96.330	Danio_rerio
ENSSSCG00000013600	RAB11B	100	98.165	ENSDNOG00000004134	-	100	98.165	Dasypus_novemcinctus
ENSSSCG00000013600	RAB11B	100	100.000	ENSDNOG00000014618	RAB11B	97	100.000	Dasypus_novemcinctus
ENSSSCG00000013600	RAB11B	100	99.083	ENSDORG00000006304	Rab11b	100	99.083	Dipodomys_ordii
ENSSSCG00000013600	RAB11B	100	94.037	ENSEBUG00000011775	rab11ba	99	94.146	Eptatretus_burgeri
ENSSSCG00000013600	RAB11B	100	81.651	ENSEBUG00000015447	-	100	81.651	Eptatretus_burgeri
ENSSSCG00000013600	RAB11B	66	100.000	ENSEEUG00000009165	-	100	100.000	Erinaceus_europaeus
ENSSSCG00000013600	RAB11B	89	92.784	ENSELUG00000019240	-	99	92.784	Esox_lucius
ENSSSCG00000013600	RAB11B	100	99.541	ENSFCAG00000015216	RAB11B	100	99.541	Felis_catus
ENSSSCG00000013600	RAB11B	100	99.541	ENSFDAG00000019872	RAB11B	100	99.541	Fukomys_damarensis
ENSSSCG00000013600	RAB11B	100	94.037	ENSFHEG00000022642	rab11ba	100	94.037	Fundulus_heteroclitus
ENSSSCG00000013600	RAB11B	100	92.661	ENSGMOG00000007390	rab11ba	99	92.661	Gadus_morhua
ENSSSCG00000013600	RAB11B	100	94.495	ENSGAFG00000005679	rab11ba	100	94.495	Gambusia_affinis
ENSSSCG00000013600	RAB11B	100	99.083	ENSGAGG00000012557	-	100	99.083	Gopherus_agassizii
ENSSSCG00000013600	RAB11B	100	100.000	ENSHGLG00000014984	RAB11B	100	100.000	Heterocephalus_glaber_female
ENSSSCG00000013600	RAB11B	100	99.541	ENSHGLG00100003638	RAB11B	100	99.541	Heterocephalus_glaber_male
ENSSSCG00000013600	RAB11B	100	100.000	ENSSTOG00000031571	RAB11B	100	100.000	Ictidomys_tridecemlineatus
ENSSSCG00000013600	RAB11B	100	100.000	ENSJJAG00000018891	Rab11b	100	100.000	Jaculus_jaculus
ENSSSCG00000013600	RAB11B	100	94.954	ENSKMAG00000006082	-	100	94.954	Kryptolebias_marmoratus
ENSSSCG00000013600	RAB11B	100	94.954	ENSLBEG00000006087	rab11ba	100	94.954	Labrus_bergylta
ENSSSCG00000013600	RAB11B	78	99.412	ENSLACG00000016974	RAB11B	99	99.412	Latimeria_chalumnae
ENSSSCG00000013600	RAB11B	100	100.000	ENSLAFG00000013598	RAB11B	100	100.000	Loxodonta_africana
ENSSSCG00000013600	RAB11B	100	100.000	ENSMNEG00000039759	-	100	100.000	Macaca_nemestrina
ENSSSCG00000013600	RAB11B	100	94.495	ENSMAMG00000018556	rab11ba	100	94.495	Mastacembelus_armatus
ENSSSCG00000013600	RAB11B	93	87.685	ENSMZEG00005019251	-	92	87.685	Maylandia_zebra
ENSSSCG00000013600	RAB11B	100	93.119	ENSMZEG00005010947	rab11ba	100	93.119	Maylandia_zebra
ENSSSCG00000013600	RAB11B	100	99.541	ENSMAUG00000021579	Rab11b	100	99.541	Mesocricetus_auratus
ENSSSCG00000013600	RAB11B	100	99.541	ENSMOCG00000012667	Rab11b	100	99.541	Microtus_ochrogaster
ENSSSCG00000013600	RAB11B	100	92.202	ENSMALG00000021949	rab11ba	100	92.202	Monopterus_albus
ENSSSCG00000013600	RAB11B	100	100.000	MGP_CAROLIEiJ_G0021415	Rab11b	100	100.000	Mus_caroli
ENSSSCG00000013600	RAB11B	100	99.083	ENSMUSG00000077450	Rab11b	100	99.083	Mus_musculus
ENSSSCG00000013600	RAB11B	100	100.000	MGP_PahariEiJ_G0020420	Rab11b	100	100.000	Mus_pahari
ENSSSCG00000013600	RAB11B	100	100.000	MGP_SPRETEiJ_G0022327	Rab11b	100	100.000	Mus_spretus
ENSSSCG00000013600	RAB11B	100	99.541	ENSMPUG00000007263	RAB11B	100	99.541	Mustela_putorius_furo
ENSSSCG00000013600	RAB11B	100	95.475	ENSMLUG00000002308	-	100	95.475	Myotis_lucifugus
ENSSSCG00000013600	RAB11B	100	100.000	ENSNGAG00000015757	Rab11b	100	100.000	Nannospalax_galili
ENSSSCG00000013600	RAB11B	100	93.578	ENSNBRG00000023898	rab11ba	84	93.578	Neolamprologus_brichardi
ENSSSCG00000013600	RAB11B	100	100.000	ENSNLEG00000001733	RAB11B	100	100.000	Nomascus_leucogenys
ENSSSCG00000013600	RAB11B	100	100.000	ENSODEG00000011371	RAB11B	100	100.000	Octodon_degus
ENSSSCG00000013600	RAB11B	100	94.037	ENSONIG00000002535	rab11ba	100	94.037	Oreochromis_niloticus
ENSSSCG00000013600	RAB11B	74	98.137	ENSOCUG00000028208	RAB11B	64	98.137	Oryctolagus_cuniculus
ENSSSCG00000013600	RAB11B	99	95.853	ENSORLG00000015307	rab11ba	99	95.853	Oryzias_latipes
ENSSSCG00000013600	RAB11B	99	95.853	ENSORLG00020020816	rab11ba	99	95.853	Oryzias_latipes_hni
ENSSSCG00000013600	RAB11B	99	96.296	ENSORLG00015016946	rab11ba	81	96.296	Oryzias_latipes_hsok
ENSSSCG00000013600	RAB11B	99	95.853	ENSOMEG00000002581	rab11ba	99	95.853	Oryzias_melastigma
ENSSSCG00000013600	RAB11B	100	100.000	ENSOGAG00000003227	RAB11B	99	100.000	Otolemur_garnettii
ENSSSCG00000013600	RAB11B	100	100.000	ENSOARG00000003801	RAB11B	97	100.000	Ovis_aries
ENSSSCG00000013600	RAB11B	83	95.556	ENSPPRG00000010160	RAB11B	88	95.556	Panthera_pardus
ENSSSCG00000013600	RAB11B	100	100.000	ENSPEMG00000014536	Rab11b	100	100.000	Peromyscus_maniculatus_bairdii
ENSSSCG00000013600	RAB11B	94	80.952	ENSPMAG00000009335	-	100	80.952	Petromyzon_marinus
ENSSSCG00000013600	RAB11B	100	94.954	ENSPFOG00000006159	rab11ba	100	94.954	Poecilia_formosa
ENSSSCG00000013600	RAB11B	100	94.954	ENSPLAG00000014243	rab11ba	100	94.954	Poecilia_latipinna
ENSSSCG00000013600	RAB11B	100	94.954	ENSPMEG00000007917	rab11ba	75	94.954	Poecilia_mexicana
ENSSSCG00000013600	RAB11B	100	94.954	ENSPREG00000006357	rab11ba	78	94.954	Poecilia_reticulata
ENSSSCG00000013600	RAB11B	100	100.000	ENSPPYG00000009504	RAB11B	100	100.000	Pongo_abelii
ENSSSCG00000013600	RAB11B	100	91.284	ENSPCAG00000016118	RAB11B	100	91.284	Procavia_capensis
ENSSSCG00000013600	RAB11B	67	97.945	ENSPCOG00000008655	-	100	97.945	Propithecus_coquereli
ENSSSCG00000013600	RAB11B	100	100.000	ENSPCOG00000028053	RAB11B	100	100.000	Propithecus_coquereli
ENSSSCG00000013600	RAB11B	100	100.000	ENSPVAG00000009645	RAB11B	100	100.000	Pteropus_vampyrus
ENSSSCG00000013600	RAB11B	93	78.537	ENSPNYG00000023810	-	90	78.537	Pundamilia_nyererei
ENSSSCG00000013600	RAB11B	100	93.119	ENSPNYG00000019644	rab11ba	100	93.119	Pundamilia_nyererei
ENSSSCG00000013600	RAB11B	100	97.706	ENSPNAG00000006431	-	100	97.706	Pygocentrus_nattereri
ENSSSCG00000013600	RAB11B	100	97.248	ENSPNAG00000020475	rab11ba	100	97.248	Pygocentrus_nattereri
ENSSSCG00000013600	RAB11B	100	100.000	ENSRNOG00000007648	Rab11b	100	100.000	Rattus_norvegicus
ENSSSCG00000013600	RAB11B	100	100.000	ENSSBOG00000035094	RAB11B	100	100.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000013600	RAB11B	100	94.954	ENSSDUG00000002965	rab11ba	100	94.954	Seriola_dumerili
ENSSSCG00000013600	RAB11B	100	94.954	ENSSLDG00000005221	rab11ba	100	94.954	Seriola_lalandi_dorsalis
ENSSSCG00000013600	RAB11B	100	94.037	ENSSPAG00000017313	rab11ba	100	94.037	Stegastes_partitus
ENSSSCG00000013600	RAB11B	59	100.000	ENSTBEG00000014750	-	100	100.000	Tupaia_belangeri
ENSSSCG00000013600	RAB11B	100	100.000	ENSTTRG00000009758	RAB11B	100	100.000	Tursiops_truncatus
ENSSSCG00000013600	RAB11B	94	80.488	ENSUMAG00000014594	RAB11B	97	80.488	Ursus_maritimus
ENSSSCG00000013600	RAB11B	100	100.000	ENSVVUG00000025210	RAB11B	100	100.000	Vulpes_vulpes
ENSSSCG00000013600	RAB11B	100	95.413	ENSXETG00000021890	rab11b.2	99	95.413	Xenopus_tropicalis
ENSSSCG00000013600	RAB11B	61	97.744	ENSXCOG00000009194	-	98	97.744	Xiphophorus_couchianus
ENSSSCG00000013600	RAB11B	100	94.495	ENSXMAG00000013416	rab11ba	100	94.495	Xiphophorus_maculatus